RNA–Protein interactions for RNA: ENST00000511284.5

TRIM6-210, Transcript of tripartite motif containing 6, humanhuman

TSL 5

Gene TRIM6, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-210ENST00000511284 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
TRIM6-210ENST00000511284 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
TRIM6-210ENST00000511284 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
TRIM6-210ENST00000511284 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
TRIM6-210ENST00000511284 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
TRIM6-210ENST00000511284 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
TRIM6-210ENST00000511284 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
TRIM6-210ENST00000511284 KIF14Q15058 1648 aa13.06□□□□□ -0.32
TRIM6-210ENST00000511284 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
TRIM6-210ENST00000511284 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
TRIM6-210ENST00000511284 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
TRIM6-210ENST00000511284 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
TRIM6-210ENST00000511284 RIMS1Q86UR5 1692 aaKnown RBP13.01□□□□□ -0.33
TRIM6-210ENST00000511284 FRMPD1Q5SYB0 1578 aa13□□□□□ -0.33
TRIM6-210ENST00000511284 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
TRIM6-210ENST00000511284 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
TRIM6-210ENST00000511284 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
TRIM6-210ENST00000511284 MTUS2Q5JR59 1369 aa12.99□□□□□ -0.33
TRIM6-210ENST00000511284 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
TRIM6-210ENST00000511284 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
TRIM6-210ENST00000511284 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
TRIM6-210ENST00000511284 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
TRIM6-210ENST00000511284 RICTORQ6R327 1708 aa12.97□□□□□ -0.33
TRIM6-210ENST00000511284 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
TRIM6-210ENST00000511284 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
TRIM6-210ENST00000511284 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
TRIM6-210ENST00000511284 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
TRIM6-210ENST00000511284 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
TRIM6-210ENST00000511284 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
TRIM6-210ENST00000511284 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
TRIM6-210ENST00000511284 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
TRIM6-210ENST00000511284 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 KDM5CP41229 1560 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 CDC42BPBQ9Y5S2 1711 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
TRIM6-210ENST00000511284 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
TRIM6-210ENST00000511284 ATP10AO60312 1499 aa12.91□□□□□ -0.34
TRIM6-210ENST00000511284 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
TRIM6-210ENST00000511284 ABCC1P33527 1531 aa12.91□□□□□ -0.34
TRIM6-210ENST00000511284 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
TRIM6-210ENST00000511284 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
TRIM6-210ENST00000511284 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
TRIM6-210ENST00000511284 CDC42BPAQ5VT25 1732 aa12.89□□□□□ -0.35
TRIM6-210ENST00000511284 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
TRIM6-210ENST00000511284 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
TRIM6-210ENST00000511284 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
TRIM6-210ENST00000511284 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
TRIM6-210ENST00000511284 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
TRIM6-210ENST00000511284 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
TRIM6-210ENST00000511284 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
TRIM6-210ENST00000511284 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
TRIM6-210ENST00000511284 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM6-210ENST00000511284 SAMD9LQ8IVG5 1584 aa12.86□□□□□ -0.35
TRIM6-210ENST00000511284 APLP2Q06481 763 aa12.85□□□□□ -0.35
TRIM6-210ENST00000511284 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
TRIM6-210ENST00000511284 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
TRIM6-210ENST00000511284 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
TRIM6-210ENST00000511284 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
TRIM6-210ENST00000511284 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
TRIM6-210ENST00000511284 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.35
TRIM6-210ENST00000511284 SUPT6HQ7KZ85 1726 aaKnown RBP12.83□□□□□ -0.36
TRIM6-210ENST00000511284 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.36
TRIM6-210ENST00000511284 AGLP35573 1532 aa12.83□□□□□ -0.36
TRIM6-210ENST00000511284 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
TRIM6-210ENST00000511284 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
TRIM6-210ENST00000511284 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
TRIM6-210ENST00000511284 DIP2CQ9Y2E4 1556 aa12.81□□□□□ -0.36
TRIM6-210ENST00000511284 PTPRTO14522 1441 aa12.81□□□□□ -0.36
TRIM6-210ENST00000511284 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
TRIM6-210ENST00000511284 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
TRIM6-210ENST00000511284 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
TRIM6-210ENST00000511284 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
TRIM6-210ENST00000511284 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
TRIM6-210ENST00000511284 MLECQ14165 292 aa12.78□□□□□ -0.36
TRIM6-210ENST00000511284 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
TRIM6-210ENST00000511284 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
TRIM6-210ENST00000511284 ABCA6Q8N139 1617 aa12.77□□□□□ -0.36
TRIM6-210ENST00000511284 SIGLEC1Q9BZZ2 1709 aa12.77□□□□□ -0.36
TRIM6-210ENST00000511284 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
TRIM6-210ENST00000511284 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
TRIM6-210ENST00000511284 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
TRIM6-210ENST00000511284 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
TRIM6-210ENST00000511284 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
TRIM6-210ENST00000511284 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
TRIM6-210ENST00000511284 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
TRIM6-210ENST00000511284 A2MP01023 1474 aa12.75□□□□□ -0.37
TRIM6-210ENST00000511284 PHF23Q9BUL5 403 aaPredicted RBP12.75□□□□□ -0.37
TRIM6-210ENST00000511284 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
TRIM6-210ENST00000511284 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
TRIM6-210ENST00000511284 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
TRIM6-210ENST00000511284 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
TRIM6-210ENST00000511284 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
TRIM6-210ENST00000511284 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
TRIM6-210ENST00000511284 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
TRIM6-210ENST00000511284 HSPA1LP34931 641 aa12.69□□□□□ -0.38
TRIM6-210ENST00000511284 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
TRIM6-210ENST00000511284 FGD6Q6ZV73 1430 aa12.68□□□□□ -0.38
TRIM6-210ENST00000511284 MAST1Q9Y2H9 1570 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms