RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 SCAPERQ9BY12 1400 aa24.66■■□□□ 1.54
COL1A1-212ENST00000510710 LMTK3Q96Q04 1460 aa24.64■■□□□ 1.54
COL1A1-212ENST00000510710 MLECQ14165 292 aa24.64■■□□□ 1.54
COL1A1-212ENST00000510710 EFCAB2Q5VUJ9 269 aa24.63■■□□□ 1.53
COL1A1-212ENST00000510710 HECW1Q76N89 1606 aa24.63■■□□□ 1.53
COL1A1-212ENST00000510710 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
COL1A1-212ENST00000510710 SIGLEC1Q9BZZ2 1709 aa24.58■■□□□ 1.53
COL1A1-212ENST00000510710 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
COL1A1-212ENST00000510710 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.52
COL1A1-212ENST00000510710 HSPA2P54652 639 aa24.57■■□□□ 1.52
COL1A1-212ENST00000510710 ATP10AO60312 1499 aa24.55■■□□□ 1.52
COL1A1-212ENST00000510710 KIF14Q15058 1648 aa24.53■■□□□ 1.52
COL1A1-212ENST00000510710 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
COL1A1-212ENST00000510710 FER1L4A9Z1Z3 1794 aa24.52■■□□□ 1.52
COL1A1-212ENST00000510710 CLIP1P30622 1438 aa24.52■■□□□ 1.52
COL1A1-212ENST00000510710 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
COL1A1-212ENST00000510710 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
COL1A1-212ENST00000510710 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
COL1A1-212ENST00000510710 AFAP1Q8N556 730 aa24.49■■□□□ 1.51
COL1A1-212ENST00000510710 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
COL1A1-212ENST00000510710 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.51
COL1A1-212ENST00000510710 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
COL1A1-212ENST00000510710 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
COL1A1-212ENST00000510710 KDM5CP41229 1560 aa24.4■■□□□ 1.5
COL1A1-212ENST00000510710 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
COL1A1-212ENST00000510710 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
COL1A1-212ENST00000510710 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
COL1A1-212ENST00000510710 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
COL1A1-212ENST00000510710 CERKQ8TCT0 537 aa24.34■■□□□ 1.49
COL1A1-212ENST00000510710 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.49
COL1A1-212ENST00000510710 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
COL1A1-212ENST00000510710 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
COL1A1-212ENST00000510710 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
COL1A1-212ENST00000510710 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
COL1A1-212ENST00000510710 REREQ9P2R6 1566 aa24.3■■□□□ 1.48
COL1A1-212ENST00000510710 ABCC1P33527 1531 aa24.3■■□□□ 1.48
COL1A1-212ENST00000510710 ABCA6Q8N139 1617 aa24.29■■□□□ 1.48
COL1A1-212ENST00000510710 UHRF1BP1Q6BDS2 1440 aa24.28■■□□□ 1.48
COL1A1-212ENST00000510710 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
COL1A1-212ENST00000510710 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
COL1A1-212ENST00000510710 SETD1BQ9UPS6 1966 aaKnown RBP24.27■■□□□ 1.48
COL1A1-212ENST00000510710 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
COL1A1-212ENST00000510710 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
COL1A1-212ENST00000510710 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
COL1A1-212ENST00000510710 AGLP35573 1532 aa24.24■■□□□ 1.47
COL1A1-212ENST00000510710 KIDINS220Q9ULH0 1771 aa24.21■■□□□ 1.47
COL1A1-212ENST00000510710 C3P01024 1663 aa24.21■■□□□ 1.47
COL1A1-212ENST00000510710 STRCQ7RTU9 1775 aa24.2■■□□□ 1.46
COL1A1-212ENST00000510710 HNRNPMP52272 730 aaKnown RBP eCLIP24.18■■□□□ 1.46
COL1A1-212ENST00000510710 CNTLNQ9NXG0 1405 aa24.17■■□□□ 1.46
COL1A1-212ENST00000510710 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
COL1A1-212ENST00000510710 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
COL1A1-212ENST00000510710 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
COL1A1-212ENST00000510710 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
COL1A1-212ENST00000510710 SYCP2Q9BX26 1530 aa24.14■■□□□ 1.45
COL1A1-212ENST00000510710 CCNB3Q8WWL7 1395 aa24.11■■□□□ 1.45
COL1A1-212ENST00000510710 PTPRTO14522 1441 aa24.1■■□□□ 1.45
COL1A1-212ENST00000510710 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
COL1A1-212ENST00000510710 PLEKHH2Q8IVE3 1493 aa24.08■■□□□ 1.45
COL1A1-212ENST00000510710 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
COL1A1-212ENST00000510710 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.45
COL1A1-212ENST00000510710 SUPT6HQ7KZ85 1726 aaKnown RBP24.08■■□□□ 1.45
COL1A1-212ENST00000510710 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
COL1A1-212ENST00000510710 NPATQ14207 1427 aa24.05■■□□□ 1.44
COL1A1-212ENST00000510710 MROH2AA6NES4 1674 aa24.04■■□□□ 1.44
COL1A1-212ENST00000510710 A2MP01023 1474 aa24.03■■□□□ 1.44
COL1A1-212ENST00000510710 NCOA1Q15788 1441 aa24.02■■□□□ 1.44
COL1A1-212ENST00000510710 GGT6Q6P531 493 aa24.02■■□□□ 1.44
COL1A1-212ENST00000510710 INO80Q9ULG1 1556 aaPredicted RBP24■■□□□ 1.43
COL1A1-212ENST00000510710 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
COL1A1-212ENST00000510710 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
COL1A1-212ENST00000510710 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
COL1A1-212ENST00000510710 PLXNC1O60486 1568 aa23.98■■□□□ 1.43
COL1A1-212ENST00000510710 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
COL1A1-212ENST00000510710 PPP6R1Q9UPN7 881 aa23.95■■□□□ 1.42
COL1A1-212ENST00000510710 LTBP4Q8N2S1 1624 aa23.95■■□□□ 1.42
COL1A1-212ENST00000510710 TIAM1Q13009 1591 aa23.94■■□□□ 1.42
COL1A1-212ENST00000510710 ADGBQ8N7X0 1667 aa23.93■■□□□ 1.42
COL1A1-212ENST00000510710 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
COL1A1-212ENST00000510710 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
COL1A1-212ENST00000510710 DISP3Q9P2K9 1392 aa23.91■■□□□ 1.42
COL1A1-212ENST00000510710 MBD5Q9P267 1494 aa23.91■■□□□ 1.42
COL1A1-212ENST00000510710 PKD2Q13563 968 aa23.9■■□□□ 1.42
COL1A1-212ENST00000510710 RTEL1-TNFRSF6BF6WH68 1400 aa23.89■■□□□ 1.41
COL1A1-212ENST00000510710 CEP162Q5TB80 1403 aa23.89■■□□□ 1.41
COL1A1-212ENST00000510710 MYO3AQ8NEV4 1616 aa23.88■■□□□ 1.41
COL1A1-212ENST00000510710 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
COL1A1-212ENST00000510710 CEP170BQ9Y4F5 1589 aaPredicted RBP23.86■■□□□ 1.41
COL1A1-212ENST00000510710 ZNF142P52746 1687 aaPredicted RBP23.86■■□□□ 1.41
COL1A1-212ENST00000510710 DHX29Q7Z478 1369 aaKnown RBP23.86■■□□□ 1.41
COL1A1-212ENST00000510710 PLA2R1Q13018 1463 aa23.86■■□□□ 1.41
COL1A1-212ENST00000510710 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
COL1A1-212ENST00000510710 KIF3BO15066 747 aa23.83■■□□□ 1.41
COL1A1-212ENST00000510710 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
COL1A1-212ENST00000510710 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
COL1A1-212ENST00000510710 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
COL1A1-212ENST00000510710 ILDR2Q71H61 639 aa23.8■■□□□ 1.4
COL1A1-212ENST00000510710 CCDC141Q6ZP82 1450 aa23.8■■□□□ 1.4
COL1A1-212ENST00000510710 A2ML1A8K2U0 1454 aa23.79■■□□□ 1.4
COL1A1-212ENST00000510710 UBAP1LF5GYI3 381 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms