RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GPS2Q13227 327 aa10.49□□□□□ -0.73
HTT-208ENST00000510626 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
HTT-208ENST00000510626 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
HTT-208ENST00000510626 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
HTT-208ENST00000510626 KIF3AQ9Y496 699 aa10.48□□□□□ -0.73
HTT-208ENST00000510626 ATP6V1DQ9Y5K8 247 aa10.48□□□□□ -0.73
HTT-208ENST00000510626 KCNJ4P48050 445 aa10.48□□□□□ -0.73
HTT-208ENST00000510626 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
HTT-208ENST00000510626 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
HTT-208ENST00000510626 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
HTT-208ENST00000510626 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
HTT-208ENST00000510626 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
HTT-208ENST00000510626 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
HTT-208ENST00000510626 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
HTT-208ENST00000510626 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
HTT-208ENST00000510626 ST18O60284 1047 aa10.46□□□□□ -0.73
HTT-208ENST00000510626 GPATCH3Q96I76 525 aa10.46□□□□□ -0.73
HTT-208ENST00000510626 MYO15BQ96JP2 1530 aa10.46□□□□□ -0.74
HTT-208ENST00000510626 ABCC9O60706 1549 aa10.46□□□□□ -0.74
HTT-208ENST00000510626 PLEKHD1A6NEE1 506 aa10.45□□□□□ -0.74
HTT-208ENST00000510626 CCDC66A2RUB6 948 aa10.45□□□□□ -0.74
HTT-208ENST00000510626 KIF16BQ96L93 1317 aa10.45□□□□□ -0.74
HTT-208ENST00000510626 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
HTT-208ENST00000510626 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
HTT-208ENST00000510626 GSE1Q14687 1217 aa10.44□□□□□ -0.74
HTT-208ENST00000510626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■■□□ 18.4
HTT-208ENST00000510626 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
HTT-208ENST00000510626 PKNOX2Q96KN3 472 aa10.44□□□□□ -0.74
HTT-208ENST00000510626 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
HTT-208ENST00000510626 HMMRO75330 724 aa10.43□□□□□ -0.74
HTT-208ENST00000510626 CAVIN1Q6NZI2 390 aaKnown RBP10.43□□□□□ -0.74
HTT-208ENST00000510626 CENPQQ7L2Z9 268 aaPredicted RBP10.43□□□□□ -0.74
HTT-208ENST00000510626 HMGN5P82970 282 aaKnown RBP10.42□□□□□ -0.74
HTT-208ENST00000510626 CWC15Q9P013 229 aaKnown RBP10.42□□□□□ -0.74
HTT-208ENST00000510626 NACADO15069 1562 aa10.42□□□□□ -0.74
HTT-208ENST00000510626 OS9Q13438 667 aaPredicted RBP10.42□□□□□ -0.74
HTT-208ENST00000510626 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
HTT-208ENST00000510626 CCDC70Q6NSX1 233 aa10.42□□□□□ -0.74
HTT-208ENST00000510626 ZBED9Q6R2W3 1325 aa10.42□□□□□ -0.74
HTT-208ENST00000510626 TPM2P07951 284 aa10.42□□□□□ -0.74
HTT-208ENST00000510626 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
HTT-208ENST00000510626 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
HTT-208ENST00000510626 KANK1Q14678 1352 aa10.41□□□□□ -0.74
HTT-208ENST00000510626 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
HTT-208ENST00000510626 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
HTT-208ENST00000510626 FAM161AQ3B820 660 aa10.4□□□□□ -0.74
HTT-208ENST00000510626 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
HTT-208ENST00000510626 TPM3P06753 285 aa10.4□□□□□ -0.75
HTT-208ENST00000510626 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
HTT-208ENST00000510626 GNL2Q13823 731 aaKnown RBP10.38□□□□□ -0.75
HTT-208ENST00000510626 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
HTT-208ENST00000510626 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
HTT-208ENST00000510626 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
HTT-208ENST00000510626 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
HTT-208ENST00000510626 HDGFP51858 240 aaKnown RBP10.36□□□□□ -0.75
HTT-208ENST00000510626 BAZ1BQ9UIG0 1483 aaKnown RBP10.35□□□□□ -0.75
HTT-208ENST00000510626 HIRIP3Q9BW71 556 aaPredicted RBP10.35□□□□□ -0.75
HTT-208ENST00000510626 DIAPH3Q9NSV4 1193 aa10.35□□□□□ -0.75
HTT-208ENST00000510626 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
HTT-208ENST00000510626 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
HTT-208ENST00000510626 ARGLU1Q9NWB6 273 aaPredicted RBP10.34□□□□□ -0.75
HTT-208ENST00000510626 PPP1R15AO75807 674 aaPredicted RBP10.34□□□□□ -0.75
HTT-208ENST00000510626 FMN1Q68DA7 1419 aa10.34□□□□□ -0.75
HTT-208ENST00000510626 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
HTT-208ENST00000510626 CCP110O43303 1012 aa10.33□□□□□ -0.76
HTT-208ENST00000510626 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
HTT-208ENST00000510626 TPM1P09493 284 aa10.33□□□□□ -0.76
HTT-208ENST00000510626 MRE11P49959 708 aa10.33□□□□□ -0.76
HTT-208ENST00000510626 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
HTT-208ENST00000510626 HSPA5P11021 654 aaKnown RBP10.32□□□□□ -0.76
HTT-208ENST00000510626 MORC1Q86VD1 984 aa10.32□□□□□ -0.76
HTT-208ENST00000510626 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
HTT-208ENST00000510626 CDR1P51861 262 aa10.32□□□□□ -0.76
HTT-208ENST00000510626 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
HTT-208ENST00000510626 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
HTT-208ENST00000510626 CCDC39Q9UFE4 941 aa10.32□□□□□ -0.76
HTT-208ENST00000510626 NUCB2P80303 420 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 REC8O95072 547 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 PDCL2Q8N4E4 241 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 LETM1O95202 739 aaPredicted RBP10.31□□□□□ -0.76
HTT-208ENST00000510626 ANKRD30AQ9BXX3 1397 aa10.31□□□□□ -0.76
HTT-208ENST00000510626 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
HTT-208ENST00000510626 CC2D1BQ5T0F9 858 aaKnown RBP10.3□□□□□ -0.76
HTT-208ENST00000510626 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
HTT-208ENST00000510626 CHMP5Q9NZZ3 219 aa10.3□□□□□ -0.76
HTT-208ENST00000510626 GOLGA6L19H0YKK7 550 aa10.29□□□□□ -0.76
HTT-208ENST00000510626 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
HTT-208ENST00000510626 PDE4AP27815 886 aa10.29□□□□□ -0.76
HTT-208ENST00000510626 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
HTT-208ENST00000510626 RTF1Q92541 710 aaKnown RBP10.28□□□□□ -0.76
HTT-208ENST00000510626 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
HTT-208ENST00000510626 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
HTT-208ENST00000510626 POGKQ9P215 609 aa10.28□□□□□ -0.76
HTT-208ENST00000510626 AK7Q96M32 723 aa10.28□□□□□ -0.76
HTT-208ENST00000510626 USP8P40818 1118 aa10.28□□□□□ -0.76
HTT-208ENST00000510626 LRRFIP1Q32MZ4 808 aaKnown RBP10.28□□□□□ -0.76
HTT-208ENST00000510626 MYBBP1AQ9BQG0 1328 aaKnown RBP10.27□□□□□ -0.76
HTT-208ENST00000510626 HMGB1P09429 215 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms