RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-222ENST00000510545 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
CLDND1-222ENST00000510545 KDM6BO15054 1643 aa23.64■■□□□ 1.37
CLDND1-222ENST00000510545 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
CLDND1-222ENST00000510545 ZNF777Q9ULD5 760 aaPredicted RBP23.63■■□□□ 1.37
CLDND1-222ENST00000510545 ROCK1Q13464 1354 aa23.6■■□□□ 1.37
CLDND1-222ENST00000510545 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
CLDND1-222ENST00000510545 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
CLDND1-222ENST00000510545 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
CLDND1-222ENST00000510545 ZCCHC11Q5TAX3 1644 aaKnown RBP23.52■■□□□ 1.36
CLDND1-222ENST00000510545 KDM5BQ9UGL1 1544 aa23.52■■□□□ 1.36
CLDND1-222ENST00000510545 DENND4BO75064 1496 aaPredicted RBP23.51■■□□□ 1.35
CLDND1-222ENST00000510545 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
CLDND1-222ENST00000510545 TTC37Q6PGP7 1564 aa23.5■■□□□ 1.35
CLDND1-222ENST00000510545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLDND1-222ENST00000510545 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
CLDND1-222ENST00000510545 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
CLDND1-222ENST00000510545 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
CLDND1-222ENST00000510545 PREX2Q70Z35 1606 aa23.49■■□□□ 1.35
CLDND1-222ENST00000510545 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
CLDND1-222ENST00000510545 ADGRL2O95490 1459 aa23.47■■□□□ 1.35
CLDND1-222ENST00000510545 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
CLDND1-222ENST00000510545 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
CLDND1-222ENST00000510545 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
CLDND1-222ENST00000510545 HNRNPMP52272 730 aaKnown RBP eCLIP23.44■■□□□ 1.34
CLDND1-222ENST00000510545 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
CLDND1-222ENST00000510545 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
CLDND1-222ENST00000510545 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
CLDND1-222ENST00000510545 SHANK2Q9UPX8 1470 aa23.41■■□□□ 1.34
CLDND1-222ENST00000510545 C9orf84Q5VXU9 1444 aa23.41■■□□□ 1.34
CLDND1-222ENST00000510545 ANKRD30AQ9BXX3 1397 aa23.41■■□□□ 1.34
CLDND1-222ENST00000510545 ARHGEF5Q12774 1597 aa23.4■■□□□ 1.34
CLDND1-222ENST00000510545 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.33
CLDND1-222ENST00000510545 MYO5CQ9NQX4 1742 aa23.37■■□□□ 1.33
CLDND1-222ENST00000510545 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
CLDND1-222ENST00000510545 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
CLDND1-222ENST00000510545 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
CLDND1-222ENST00000510545 FOXD1Q16676 465 aa23.35■■□□□ 1.33
CLDND1-222ENST00000510545 CCDC141Q6ZP82 1450 aa23.34■■□□□ 1.33
CLDND1-222ENST00000510545 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
CLDND1-222ENST00000510545 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.33
CLDND1-222ENST00000510545 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
CLDND1-222ENST00000510545 TONSLQ96HA7 1378 aa23.33■■□□□ 1.33
CLDND1-222ENST00000510545 PLCH2O75038 1416 aa23.33■■□□□ 1.32
CLDND1-222ENST00000510545 PZPP20742 1482 aa23.31■■□□□ 1.32
CLDND1-222ENST00000510545 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
CLDND1-222ENST00000510545 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
CLDND1-222ENST00000510545 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
CLDND1-222ENST00000510545 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
CLDND1-222ENST00000510545 KIF15Q9NS87 1388 aa23.28■■□□□ 1.32
CLDND1-222ENST00000510545 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
CLDND1-222ENST00000510545 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
CLDND1-222ENST00000510545 PLEKHH2Q8IVE3 1493 aa23.25■■□□□ 1.31
CLDND1-222ENST00000510545 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
CLDND1-222ENST00000510545 ASXL2Q76L83 1435 aa23.22■■□□□ 1.31
CLDND1-222ENST00000510545 MAST1Q9Y2H9 1570 aa23.22■■□□□ 1.31
CLDND1-222ENST00000510545 ABCC1P33527 1531 aa23.2■■□□□ 1.3
CLDND1-222ENST00000510545 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
CLDND1-222ENST00000510545 NUP155O75694 1391 aa23.18■■□□□ 1.3
CLDND1-222ENST00000510545 MIER1Q8N108 512 aa23.17■■□□□ 1.3
CLDND1-222ENST00000510545 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
CLDND1-222ENST00000510545 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
CLDND1-222ENST00000510545 ABCA9Q8IUA7 1624 aa23.16■■□□□ 1.3
CLDND1-222ENST00000510545 PKD2Q13563 968 aa23.16■■□□□ 1.3
CLDND1-222ENST00000510545 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
CLDND1-222ENST00000510545 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.29
CLDND1-222ENST00000510545 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
CLDND1-222ENST00000510545 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
CLDND1-222ENST00000510545 FANCAO15360 1455 aa23.1■■□□□ 1.29
CLDND1-222ENST00000510545 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-222ENST00000510545 TEX14Q8IWB6 1497 aa23.09■■□□□ 1.29
CLDND1-222ENST00000510545 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
CLDND1-222ENST00000510545 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
CLDND1-222ENST00000510545 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
CLDND1-222ENST00000510545 UNC13BO14795 1591 aa23.03■■□□□ 1.28
CLDND1-222ENST00000510545 SPAG9O60271 1321 aaKnown RBP23.03■■□□□ 1.28
CLDND1-222ENST00000510545 ZFYVE16Q7Z3T8 1539 aa23.01■■□□□ 1.27
CLDND1-222ENST00000510545 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
CLDND1-222ENST00000510545 RTEL1-TNFRSF6BF6WH68 1400 aa23■■□□□ 1.27
CLDND1-222ENST00000510545 ERBINQ96RT1 1412 aa23■■□□□ 1.27
CLDND1-222ENST00000510545 SCAPERQ9BY12 1400 aa23■■□□□ 1.27
CLDND1-222ENST00000510545 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
CLDND1-222ENST00000510545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
CLDND1-222ENST00000510545 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
CLDND1-222ENST00000510545 CD109Q6YHK3 1445 aa22.96■■□□□ 1.27
CLDND1-222ENST00000510545 MAGI2Q86UL8 1455 aa22.96■■□□□ 1.27
CLDND1-222ENST00000510545 IQGAP3Q86VI3 1631 aa22.95■■□□□ 1.26
CLDND1-222ENST00000510545 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-222ENST00000510545 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
CLDND1-222ENST00000510545 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
CLDND1-222ENST00000510545 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
CLDND1-222ENST00000510545 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
CLDND1-222ENST00000510545 ATP7AQ04656 1500 aa22.93■■□□□ 1.26
CLDND1-222ENST00000510545 HSPA5P11021 654 aaKnown RBP22.9■■□□□ 1.26
CLDND1-222ENST00000510545 PLA2R1Q13018 1463 aa22.89■■□□□ 1.26
CLDND1-222ENST00000510545 EIF4G2P78344 907 aaKnown RBP eCLIP22.85■■□□□ 1.25
CLDND1-222ENST00000510545 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
CLDND1-222ENST00000510545 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
CLDND1-222ENST00000510545 ZNF518AQ6AHZ1 1483 aa22.84■■□□□ 1.25
CLDND1-222ENST00000510545 CFAP74Q9C0B2 1584 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms