RNA–Protein interactions for RNA: ENST00000510499.1

TMED9-205, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-205ENST00000510499 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
TMED9-205ENST00000510499 MLECQ14165 292 aa16.46■□□□□ 0.23
TMED9-205ENST00000510499 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
TMED9-205ENST00000510499 STRCQ7RTU9 1775 aa16.43■□□□□ 0.22
TMED9-205ENST00000510499 SPATA31D1Q6ZQQ2 1576 aa16.43■□□□□ 0.22
TMED9-205ENST00000510499 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
TMED9-205ENST00000510499 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
TMED9-205ENST00000510499 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
TMED9-205ENST00000510499 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
TMED9-205ENST00000510499 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
TMED9-205ENST00000510499 SOCS7O14512 581 aa16.4■□□□□ 0.22
TMED9-205ENST00000510499 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
TMED9-205ENST00000510499 ATP10AO60312 1499 aa16.39■□□□□ 0.21
TMED9-205ENST00000510499 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
TMED9-205ENST00000510499 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
TMED9-205ENST00000510499 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
TMED9-205ENST00000510499 PLCH2O75038 1416 aa16.36■□□□□ 0.21
TMED9-205ENST00000510499 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
TMED9-205ENST00000510499 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
TMED9-205ENST00000510499 ZNF518AQ6AHZ1 1483 aa16.33■□□□□ 0.2
TMED9-205ENST00000510499 C3P01024 1663 aa16.33■□□□□ 0.2
TMED9-205ENST00000510499 KDM5CP41229 1560 aa16.32■□□□□ 0.2
TMED9-205ENST00000510499 KIF14Q15058 1648 aa16.31■□□□□ 0.2
TMED9-205ENST00000510499 EEA1Q15075 1411 aa16.31■□□□□ 0.2
TMED9-205ENST00000510499 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
TMED9-205ENST00000510499 PTPRTO14522 1441 aa16.29■□□□□ 0.2
TMED9-205ENST00000510499 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
TMED9-205ENST00000510499 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
TMED9-205ENST00000510499 ABCA6Q8N139 1617 aa16.28■□□□□ 0.2
TMED9-205ENST00000510499 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
TMED9-205ENST00000510499 IQSEC2Q5JU85 1478 aa16.27■□□□□ 0.19
TMED9-205ENST00000510499 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.19
TMED9-205ENST00000510499 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
TMED9-205ENST00000510499 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
TMED9-205ENST00000510499 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
TMED9-205ENST00000510499 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
TMED9-205ENST00000510499 AGLP35573 1532 aa16.21■□□□□ 0.19
TMED9-205ENST00000510499 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
TMED9-205ENST00000510499 CLIP1P30622 1438 aa16.2■□□□□ 0.18
TMED9-205ENST00000510499 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
TMED9-205ENST00000510499 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
TMED9-205ENST00000510499 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
TMED9-205ENST00000510499 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
TMED9-205ENST00000510499 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
TMED9-205ENST00000510499 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
TMED9-205ENST00000510499 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
TMED9-205ENST00000510499 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
TMED9-205ENST00000510499 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
TMED9-205ENST00000510499 ABCC1P33527 1531 aa16.19■□□□□ 0.18
TMED9-205ENST00000510499 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
TMED9-205ENST00000510499 CAMSAP1Q5T5Y3 1602 aa16.18■□□□□ 0.18
TMED9-205ENST00000510499 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
TMED9-205ENST00000510499 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
TMED9-205ENST00000510499 KIDINS220Q9ULH0 1771 aa16.16■□□□□ 0.18
TMED9-205ENST00000510499 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
TMED9-205ENST00000510499 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.17
TMED9-205ENST00000510499 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
TMED9-205ENST00000510499 NPATQ14207 1427 aa16.12■□□□□ 0.17
TMED9-205ENST00000510499 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
TMED9-205ENST00000510499 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
TMED9-205ENST00000510499 UBAP1LF5GYI3 381 aa16.08■□□□□ 0.16
TMED9-205ENST00000510499 ZNF335Q9H4Z2 1342 aaPredicted RBP16.08■□□□□ 0.16
TMED9-205ENST00000510499 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
TMED9-205ENST00000510499 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
TMED9-205ENST00000510499 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
TMED9-205ENST00000510499 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
TMED9-205ENST00000510499 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
TMED9-205ENST00000510499 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
TMED9-205ENST00000510499 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
TMED9-205ENST00000510499 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
TMED9-205ENST00000510499 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
TMED9-205ENST00000510499 MED1Q15648 1581 aaPredicted RBP16.03■□□□□ 0.16
TMED9-205ENST00000510499 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
TMED9-205ENST00000510499 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
TMED9-205ENST00000510499 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
TMED9-205ENST00000510499 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
TMED9-205ENST00000510499 PKD2Q13563 968 aa16.01■□□□□ 0.15
TMED9-205ENST00000510499 FOXD1Q16676 465 aa16.01■□□□□ 0.15
TMED9-205ENST00000510499 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
TMED9-205ENST00000510499 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
TMED9-205ENST00000510499 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
TMED9-205ENST00000510499 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
TMED9-205ENST00000510499 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
TMED9-205ENST00000510499 A2MP01023 1474 aa15.97■□□□□ 0.15
TMED9-205ENST00000510499 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
TMED9-205ENST00000510499 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
TMED9-205ENST00000510499 ZNF777Q9ULD5 760 aaPredicted RBP15.96■□□□□ 0.15
TMED9-205ENST00000510499 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
TMED9-205ENST00000510499 CPS1P31327 1500 aa15.94■□□□□ 0.14
TMED9-205ENST00000510499 A2ML1A8K2U0 1454 aa15.94■□□□□ 0.14
TMED9-205ENST00000510499 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
TMED9-205ENST00000510499 PLEKHH2Q8IVE3 1493 aa15.93■□□□□ 0.14
TMED9-205ENST00000510499 GPATCH8Q9UKJ3 1502 aaKnown RBP15.93■□□□□ 0.14
TMED9-205ENST00000510499 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
TMED9-205ENST00000510499 HSPA1LP34931 641 aa15.92■□□□□ 0.14
TMED9-205ENST00000510499 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
TMED9-205ENST00000510499 GGT6Q6P531 493 aa15.91■□□□□ 0.14
TMED9-205ENST00000510499 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
TMED9-205ENST00000510499 KIAA1107Q9UPP5 1409 aa15.9■□□□□ 0.14
TMED9-205ENST00000510499 TOM1O60784 492 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms