RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-208ENST00000509980 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
EXOSC9-208ENST00000509980 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
EXOSC9-208ENST00000509980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
EXOSC9-208ENST00000509980 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
EXOSC9-208ENST00000509980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
EXOSC9-208ENST00000509980 MLECQ14165 292 aa17.98■□□□□ 0.47
EXOSC9-208ENST00000509980 FOXD1Q16676 465 aa17.97■□□□□ 0.47
EXOSC9-208ENST00000509980 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
EXOSC9-208ENST00000509980 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
EXOSC9-208ENST00000509980 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
EXOSC9-208ENST00000509980 ATP10AO60312 1499 aa17.92■□□□□ 0.46
EXOSC9-208ENST00000509980 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
EXOSC9-208ENST00000509980 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
EXOSC9-208ENST00000509980 PTPRTO14522 1441 aa17.9■□□□□ 0.46
EXOSC9-208ENST00000509980 C9orf84Q5VXU9 1444 aa17.9■□□□□ 0.46
EXOSC9-208ENST00000509980 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
EXOSC9-208ENST00000509980 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
EXOSC9-208ENST00000509980 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
EXOSC9-208ENST00000509980 PLCH2O75038 1416 aa17.86■□□□□ 0.45
EXOSC9-208ENST00000509980 C3P01024 1663 aa17.84■□□□□ 0.45
EXOSC9-208ENST00000509980 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
EXOSC9-208ENST00000509980 KDM5CP41229 1560 aa17.79■□□□□ 0.44
EXOSC9-208ENST00000509980 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
EXOSC9-208ENST00000509980 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
EXOSC9-208ENST00000509980 ZNF518AQ6AHZ1 1483 aa17.78■□□□□ 0.44
EXOSC9-208ENST00000509980 DIP2CQ9Y2E4 1556 aa17.77■□□□□ 0.43
EXOSC9-208ENST00000509980 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
EXOSC9-208ENST00000509980 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
EXOSC9-208ENST00000509980 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
EXOSC9-208ENST00000509980 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
EXOSC9-208ENST00000509980 EFCAB2Q5VUJ9 269 aa17.73■□□□□ 0.43
EXOSC9-208ENST00000509980 ABCA6Q8N139 1617 aa17.73■□□□□ 0.43
EXOSC9-208ENST00000509980 AGLP35573 1532 aa17.72■□□□□ 0.43
EXOSC9-208ENST00000509980 AFAP1Q8N556 730 aa17.71■□□□□ 0.42
EXOSC9-208ENST00000509980 KIF14Q15058 1648 aa17.7■□□□□ 0.42
EXOSC9-208ENST00000509980 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
EXOSC9-208ENST00000509980 MLH3Q9UHC1 1453 aa17.68■□□□□ 0.42
EXOSC9-208ENST00000509980 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
EXOSC9-208ENST00000509980 UBAP1LF5GYI3 381 aa17.65■□□□□ 0.42
EXOSC9-208ENST00000509980 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
EXOSC9-208ENST00000509980 MROH2AA6NES4 1674 aa17.65■□□□□ 0.42
EXOSC9-208ENST00000509980 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
EXOSC9-208ENST00000509980 ZNF335Q9H4Z2 1342 aaPredicted RBP17.64■□□□□ 0.41
EXOSC9-208ENST00000509980 NPATQ14207 1427 aa17.63■□□□□ 0.41
EXOSC9-208ENST00000509980 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
EXOSC9-208ENST00000509980 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
EXOSC9-208ENST00000509980 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
EXOSC9-208ENST00000509980 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
EXOSC9-208ENST00000509980 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
EXOSC9-208ENST00000509980 ITSN2Q9NZM3 1697 aa17.6■□□□□ 0.41
EXOSC9-208ENST00000509980 ABCC1P33527 1531 aa17.59■□□□□ 0.41
EXOSC9-208ENST00000509980 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
EXOSC9-208ENST00000509980 EEA1Q15075 1411 aa17.59■□□□□ 0.41
EXOSC9-208ENST00000509980 PLA2R1Q13018 1463 aa17.58■□□□□ 0.41
EXOSC9-208ENST00000509980 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.41
EXOSC9-208ENST00000509980 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
EXOSC9-208ENST00000509980 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
EXOSC9-208ENST00000509980 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
EXOSC9-208ENST00000509980 PREX2Q70Z35 1606 aa17.57■□□□□ 0.4
EXOSC9-208ENST00000509980 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
EXOSC9-208ENST00000509980 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
EXOSC9-208ENST00000509980 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
EXOSC9-208ENST00000509980 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
EXOSC9-208ENST00000509980 PKD2Q13563 968 aa17.54■□□□□ 0.4
EXOSC9-208ENST00000509980 CLIP1P30622 1438 aa17.54■□□□□ 0.4
EXOSC9-208ENST00000509980 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
EXOSC9-208ENST00000509980 HSPA1LP34931 641 aa17.52■□□□□ 0.4
EXOSC9-208ENST00000509980 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
EXOSC9-208ENST00000509980 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.4
EXOSC9-208ENST00000509980 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
EXOSC9-208ENST00000509980 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
EXOSC9-208ENST00000509980 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
EXOSC9-208ENST00000509980 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
EXOSC9-208ENST00000509980 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
EXOSC9-208ENST00000509980 PLXNC1O60486 1568 aa17.46■□□□□ 0.39
EXOSC9-208ENST00000509980 CPS1P31327 1500 aa17.45■□□□□ 0.38
EXOSC9-208ENST00000509980 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
EXOSC9-208ENST00000509980 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
EXOSC9-208ENST00000509980 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
EXOSC9-208ENST00000509980 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
EXOSC9-208ENST00000509980 TOM1O60784 492 aa17.43■□□□□ 0.38
EXOSC9-208ENST00000509980 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
EXOSC9-208ENST00000509980 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
EXOSC9-208ENST00000509980 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
EXOSC9-208ENST00000509980 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
EXOSC9-208ENST00000509980 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
EXOSC9-208ENST00000509980 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
EXOSC9-208ENST00000509980 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
EXOSC9-208ENST00000509980 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
EXOSC9-208ENST00000509980 A2MP01023 1474 aa17.38■□□□□ 0.37
EXOSC9-208ENST00000509980 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
EXOSC9-208ENST00000509980 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
EXOSC9-208ENST00000509980 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
EXOSC9-208ENST00000509980 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
EXOSC9-208ENST00000509980 GGT6Q6P531 493 aa17.33■□□□□ 0.36
EXOSC9-208ENST00000509980 GPATCH8Q9UKJ3 1502 aaKnown RBP17.33■□□□□ 0.36
EXOSC9-208ENST00000509980 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
EXOSC9-208ENST00000509980 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
EXOSC9-208ENST00000509980 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
EXOSC9-208ENST00000509980 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms