RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
CYSTM1-203ENST00000509589 PLCH2O75038 1416 aa17.22■□□□□ 0.35
CYSTM1-203ENST00000509589 FER1L4A9Z1Z3 1794 aa17.2■□□□□ 0.34
CYSTM1-203ENST00000509589 ATP1B4Q9UN42 357 aaPredicted RBP17.19■□□□□ 0.34
CYSTM1-203ENST00000509589 KIF14Q15058 1648 aa17.18■□□□□ 0.34
CYSTM1-203ENST00000509589 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
CYSTM1-203ENST00000509589 MYO5CQ9NQX4 1742 aa17.16■□□□□ 0.34
CYSTM1-203ENST00000509589 ATP10AO60312 1499 aa17.16■□□□□ 0.34
CYSTM1-203ENST00000509589 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
CYSTM1-203ENST00000509589 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
CYSTM1-203ENST00000509589 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
CYSTM1-203ENST00000509589 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
CYSTM1-203ENST00000509589 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
CYSTM1-203ENST00000509589 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
CYSTM1-203ENST00000509589 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
CYSTM1-203ENST00000509589 AFAP1Q8N556 730 aa17.11■□□□□ 0.33
CYSTM1-203ENST00000509589 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
CYSTM1-203ENST00000509589 TROQ12816 1431 aaPredicted RBP17.1■□□□□ 0.33
CYSTM1-203ENST00000509589 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
CYSTM1-203ENST00000509589 ARHGAP5Q13017 1502 aa17.1■□□□□ 0.33
CYSTM1-203ENST00000509589 KDM5CP41229 1560 aa17.1■□□□□ 0.33
CYSTM1-203ENST00000509589 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
CYSTM1-203ENST00000509589 DIP2CQ9Y2E4 1556 aa17.07■□□□□ 0.32
CYSTM1-203ENST00000509589 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
CYSTM1-203ENST00000509589 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
CYSTM1-203ENST00000509589 CLIP1P30622 1438 aa17.04■□□□□ 0.32
CYSTM1-203ENST00000509589 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
CYSTM1-203ENST00000509589 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
CYSTM1-203ENST00000509589 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
CYSTM1-203ENST00000509589 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
CYSTM1-203ENST00000509589 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
CYSTM1-203ENST00000509589 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
CYSTM1-203ENST00000509589 ABCC1P33527 1531 aa17.01■□□□□ 0.31
CYSTM1-203ENST00000509589 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
CYSTM1-203ENST00000509589 PREX2Q70Z35 1606 aa17■□□□□ 0.31
CYSTM1-203ENST00000509589 C3P01024 1663 aa16.99■□□□□ 0.31
CYSTM1-203ENST00000509589 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
CYSTM1-203ENST00000509589 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
CYSTM1-203ENST00000509589 AGLP35573 1532 aa16.96■□□□□ 0.3
CYSTM1-203ENST00000509589 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
CYSTM1-203ENST00000509589 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
CYSTM1-203ENST00000509589 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
CYSTM1-203ENST00000509589 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
CYSTM1-203ENST00000509589 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
CYSTM1-203ENST00000509589 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
CYSTM1-203ENST00000509589 PTPRTO14522 1441 aa16.91■□□□□ 0.3
CYSTM1-203ENST00000509589 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
CYSTM1-203ENST00000509589 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
CYSTM1-203ENST00000509589 ESF1Q9H501 851 aaKnown RBP16.89■□□□□ 0.29
CYSTM1-203ENST00000509589 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
CYSTM1-203ENST00000509589 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
CYSTM1-203ENST00000509589 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
CYSTM1-203ENST00000509589 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
CYSTM1-203ENST00000509589 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
CYSTM1-203ENST00000509589 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
CYSTM1-203ENST00000509589 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
CYSTM1-203ENST00000509589 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-203ENST00000509589 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-203ENST00000509589 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
CYSTM1-203ENST00000509589 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
CYSTM1-203ENST00000509589 MROH2AA6NES4 1674 aa16.83■□□□□ 0.28
CYSTM1-203ENST00000509589 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
CYSTM1-203ENST00000509589 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
CYSTM1-203ENST00000509589 NPATQ14207 1427 aa16.82■□□□□ 0.28
CYSTM1-203ENST00000509589 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
CYSTM1-203ENST00000509589 PLXNC1O60486 1568 aa16.81■□□□□ 0.28
CYSTM1-203ENST00000509589 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
CYSTM1-203ENST00000509589 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
CYSTM1-203ENST00000509589 CLTCQ00610 1675 aaKnown RBP16.8■□□□□ 0.28
CYSTM1-203ENST00000509589 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
CYSTM1-203ENST00000509589 A2MP01023 1474 aa16.78■□□□□ 0.28
CYSTM1-203ENST00000509589 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
CYSTM1-203ENST00000509589 CFDP1Q9UEE9 299 aaPredicted RBP16.77■□□□□ 0.28
CYSTM1-203ENST00000509589 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
CYSTM1-203ENST00000509589 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.27
CYSTM1-203ENST00000509589 ZNF335Q9H4Z2 1342 aaPredicted RBP16.76■□□□□ 0.27
CYSTM1-203ENST00000509589 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
CYSTM1-203ENST00000509589 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
CYSTM1-203ENST00000509589 ZNF142P52746 1687 aaPredicted RBP16.75■□□□□ 0.27
CYSTM1-203ENST00000509589 SOCS7O14512 581 aa16.75■□□□□ 0.27
CYSTM1-203ENST00000509589 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
CYSTM1-203ENST00000509589 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
CYSTM1-203ENST00000509589 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
CYSTM1-203ENST00000509589 GGT6Q6P531 493 aa16.74■□□□□ 0.27
CYSTM1-203ENST00000509589 MTUS2Q5JR59 1369 aa16.72■□□□□ 0.27
CYSTM1-203ENST00000509589 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
CYSTM1-203ENST00000509589 TCOF1Q13428 1488 aaKnown RBP16.72■□□□□ 0.27
CYSTM1-203ENST00000509589 TIAM1Q13009 1591 aa16.72■□□□□ 0.27
CYSTM1-203ENST00000509589 ADGBQ8N7X0 1667 aa16.69■□□□□ 0.26
CYSTM1-203ENST00000509589 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
CYSTM1-203ENST00000509589 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
CYSTM1-203ENST00000509589 PKD2Q13563 968 aa16.68■□□□□ 0.26
CYSTM1-203ENST00000509589 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
CYSTM1-203ENST00000509589 A2ML1A8K2U0 1454 aa16.65■□□□□ 0.26
CYSTM1-203ENST00000509589 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
CYSTM1-203ENST00000509589 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
CYSTM1-203ENST00000509589 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
CYSTM1-203ENST00000509589 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
CYSTM1-203ENST00000509589 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
CYSTM1-203ENST00000509589 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms