RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
COPS4-207ENST00000509317 CFAP74Q9C0B2 1584 aa17.19■□□□□ 0.34
COPS4-207ENST00000509317 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
COPS4-207ENST00000509317 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
COPS4-207ENST00000509317 PLCH2O75038 1416 aa17.14■□□□□ 0.33
COPS4-207ENST00000509317 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
COPS4-207ENST00000509317 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
COPS4-207ENST00000509317 ATP10AO60312 1499 aa17.12■□□□□ 0.33
COPS4-207ENST00000509317 ILDR2Q71H61 639 aa17.11■□□□□ 0.33
COPS4-207ENST00000509317 EEA1Q15075 1411 aa17.11■□□□□ 0.33
COPS4-207ENST00000509317 AFAP1Q8N556 730 aa17.1■□□□□ 0.33
COPS4-207ENST00000509317 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
COPS4-207ENST00000509317 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
COPS4-207ENST00000509317 KIF14Q15058 1648 aa17.08■□□□□ 0.32
COPS4-207ENST00000509317 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
COPS4-207ENST00000509317 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
COPS4-207ENST00000509317 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
COPS4-207ENST00000509317 UBTFP17480 764 aaKnown RBP17.04■□□□□ 0.32
COPS4-207ENST00000509317 STRCQ7RTU9 1775 aa17.03■□□□□ 0.32
COPS4-207ENST00000509317 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
COPS4-207ENST00000509317 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
COPS4-207ENST00000509317 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
COPS4-207ENST00000509317 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
COPS4-207ENST00000509317 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
COPS4-207ENST00000509317 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
COPS4-207ENST00000509317 KDM5CP41229 1560 aa16.99■□□□□ 0.31
COPS4-207ENST00000509317 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
COPS4-207ENST00000509317 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
COPS4-207ENST00000509317 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
COPS4-207ENST00000509317 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
COPS4-207ENST00000509317 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
COPS4-207ENST00000509317 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
COPS4-207ENST00000509317 SOCS7O14512 581 aa16.94■□□□□ 0.3
COPS4-207ENST00000509317 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
COPS4-207ENST00000509317 C3P01024 1663 aa16.93■□□□□ 0.3
COPS4-207ENST00000509317 CLIP1P30622 1438 aa16.93■□□□□ 0.3
COPS4-207ENST00000509317 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
COPS4-207ENST00000509317 PTPRTO14522 1441 aa16.91■□□□□ 0.3
COPS4-207ENST00000509317 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
COPS4-207ENST00000509317 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
COPS4-207ENST00000509317 LTBP4Q8N2S1 1624 aa16.9■□□□□ 0.3
COPS4-207ENST00000509317 ABCC1P33527 1531 aa16.9■□□□□ 0.3
COPS4-207ENST00000509317 REREQ9P2R6 1566 aa16.89■□□□□ 0.3
COPS4-207ENST00000509317 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
COPS4-207ENST00000509317 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
COPS4-207ENST00000509317 AGLP35573 1532 aa16.87■□□□□ 0.29
COPS4-207ENST00000509317 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
COPS4-207ENST00000509317 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
COPS4-207ENST00000509317 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
COPS4-207ENST00000509317 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
COPS4-207ENST00000509317 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
COPS4-207ENST00000509317 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
COPS4-207ENST00000509317 ZNF335Q9H4Z2 1342 aaPredicted RBP16.84■□□□□ 0.29
COPS4-207ENST00000509317 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
COPS4-207ENST00000509317 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
COPS4-207ENST00000509317 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
COPS4-207ENST00000509317 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
COPS4-207ENST00000509317 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
COPS4-207ENST00000509317 CNTLNQ9NXG0 1405 aa16.8■□□□□ 0.28
COPS4-207ENST00000509317 SYCP2Q9BX26 1530 aa16.8■□□□□ 0.28
COPS4-207ENST00000509317 UBAP1LF5GYI3 381 aa16.79■□□□□ 0.28
COPS4-207ENST00000509317 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
COPS4-207ENST00000509317 SPAG9O60271 1321 aaKnown RBP16.78■□□□□ 0.28
COPS4-207ENST00000509317 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
COPS4-207ENST00000509317 NPATQ14207 1427 aa16.77■□□□□ 0.27
COPS4-207ENST00000509317 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
COPS4-207ENST00000509317 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
COPS4-207ENST00000509317 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
COPS4-207ENST00000509317 GGT6Q6P531 493 aa16.75■□□□□ 0.27
COPS4-207ENST00000509317 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
COPS4-207ENST00000509317 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
COPS4-207ENST00000509317 ATP7AQ04656 1500 aa16.72■□□□□ 0.27
COPS4-207ENST00000509317 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
COPS4-207ENST00000509317 MYO3AQ8NEV4 1616 aa16.71■□□□□ 0.27
COPS4-207ENST00000509317 A2MP01023 1474 aa16.71■□□□□ 0.27
COPS4-207ENST00000509317 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
COPS4-207ENST00000509317 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
COPS4-207ENST00000509317 CFDP1Q9UEE9 299 aaPredicted RBP16.7■□□□□ 0.26
COPS4-207ENST00000509317 PLXNC1O60486 1568 aa16.69■□□□□ 0.26
COPS4-207ENST00000509317 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
COPS4-207ENST00000509317 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
COPS4-207ENST00000509317 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
COPS4-207ENST00000509317 PKD2Q13563 968 aa16.68■□□□□ 0.26
COPS4-207ENST00000509317 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
COPS4-207ENST00000509317 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
COPS4-207ENST00000509317 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
COPS4-207ENST00000509317 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
COPS4-207ENST00000509317 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
COPS4-207ENST00000509317 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
COPS4-207ENST00000509317 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
COPS4-207ENST00000509317 HSPA1LP34931 641 aa16.65■□□□□ 0.26
COPS4-207ENST00000509317 FBXO31Q5XUX0 539 aaPredicted RBP16.65■□□□□ 0.26
COPS4-207ENST00000509317 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
COPS4-207ENST00000509317 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
COPS4-207ENST00000509317 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
COPS4-207ENST00000509317 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
COPS4-207ENST00000509317 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
COPS4-207ENST00000509317 MBD5Q9P267 1494 aa16.59■□□□□ 0.25
COPS4-207ENST00000509317 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
COPS4-207ENST00000509317 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms