RNA–Protein interactions for RNA: ENST00000509272.1

SLC1A3-210, Transcript of solute carrier family 1 member 3, humanhuman

TSL 4

Gene SLC1A3, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-210ENST00000509272 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
SLC1A3-210ENST00000509272 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
SLC1A3-210ENST00000509272 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
SLC1A3-210ENST00000509272 TOM1O60784 492 aa13.75□□□□□ -0.21
SLC1A3-210ENST00000509272 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
SLC1A3-210ENST00000509272 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
SLC1A3-210ENST00000509272 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
SLC1A3-210ENST00000509272 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
SLC1A3-210ENST00000509272 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
SLC1A3-210ENST00000509272 POTEAQ6S8J7 498 aa13.71□□□□□ -0.21
SLC1A3-210ENST00000509272 HECW1Q76N89 1606 aa13.7□□□□□ -0.22
SLC1A3-210ENST00000509272 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
SLC1A3-210ENST00000509272 SUPT6HQ7KZ85 1726 aaKnown RBP13.69□□□□□ -0.22
SLC1A3-210ENST00000509272 ATP10BO94823 1461 aa13.68□□□□□ -0.22
SLC1A3-210ENST00000509272 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
SLC1A3-210ENST00000509272 ALKQ9UM73 1620 aa13.65□□□□□ -0.22
SLC1A3-210ENST00000509272 ATP10AO60312 1499 aa13.65□□□□□ -0.22
SLC1A3-210ENST00000509272 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
SLC1A3-210ENST00000509272 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
SLC1A3-210ENST00000509272 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
SLC1A3-210ENST00000509272 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLC1A3-210ENST00000509272 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
SLC1A3-210ENST00000509272 CPS1P31327 1500 aa13.59□□□□□ -0.23
SLC1A3-210ENST00000509272 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
SLC1A3-210ENST00000509272 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
SLC1A3-210ENST00000509272 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
SLC1A3-210ENST00000509272 PKD2Q13563 968 aa13.57□□□□□ -0.24
SLC1A3-210ENST00000509272 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
SLC1A3-210ENST00000509272 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
SLC1A3-210ENST00000509272 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
SLC1A3-210ENST00000509272 ZNF142P52746 1687 aaPredicted RBP13.53□□□□□ -0.24
SLC1A3-210ENST00000509272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
SLC1A3-210ENST00000509272 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
SLC1A3-210ENST00000509272 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
SLC1A3-210ENST00000509272 SHANK2Q9UPX8 1470 aa13.52□□□□□ -0.25
SLC1A3-210ENST00000509272 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
SLC1A3-210ENST00000509272 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
SLC1A3-210ENST00000509272 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
SLC1A3-210ENST00000509272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC1A3-210ENST00000509272 NPATQ14207 1427 aa13.47□□□□□ -0.25
SLC1A3-210ENST00000509272 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
SLC1A3-210ENST00000509272 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
SLC1A3-210ENST00000509272 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
SLC1A3-210ENST00000509272 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.26
SLC1A3-210ENST00000509272 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
SLC1A3-210ENST00000509272 AGLP35573 1532 aa13.44□□□□□ -0.26
SLC1A3-210ENST00000509272 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
SLC1A3-210ENST00000509272 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
SLC1A3-210ENST00000509272 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
SLC1A3-210ENST00000509272 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
SLC1A3-210ENST00000509272 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
SLC1A3-210ENST00000509272 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
SLC1A3-210ENST00000509272 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
SLC1A3-210ENST00000509272 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
SLC1A3-210ENST00000509272 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
SLC1A3-210ENST00000509272 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
SLC1A3-210ENST00000509272 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
SLC1A3-210ENST00000509272 ZMYM3Q14202 1370 aa13.39□□□□□ -0.27
SLC1A3-210ENST00000509272 DNMT1P26358 1616 aaKnown RBP13.38□□□□□ -0.27
SLC1A3-210ENST00000509272 LRRC7Q96NW7 1537 aa13.38□□□□□ -0.27
SLC1A3-210ENST00000509272 KDM5CP41229 1560 aa13.37□□□□□ -0.27
SLC1A3-210ENST00000509272 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
SLC1A3-210ENST00000509272 NUP153P49790 1475 aaKnown RBP13.36□□□□□ -0.27
SLC1A3-210ENST00000509272 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
SLC1A3-210ENST00000509272 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
SLC1A3-210ENST00000509272 PLCH2O75038 1416 aa13.35□□□□□ -0.27
SLC1A3-210ENST00000509272 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
SLC1A3-210ENST00000509272 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
SLC1A3-210ENST00000509272 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
SLC1A3-210ENST00000509272 SYNMO15061 1565 aa13.32□□□□□ -0.28
SLC1A3-210ENST00000509272 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
SLC1A3-210ENST00000509272 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
SLC1A3-210ENST00000509272 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
SLC1A3-210ENST00000509272 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
SLC1A3-210ENST00000509272 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
SLC1A3-210ENST00000509272 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.29
SLC1A3-210ENST00000509272 IQGAP1P46940 1657 aa13.27□□□□□ -0.29
SLC1A3-210ENST00000509272 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
SLC1A3-210ENST00000509272 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
SLC1A3-210ENST00000509272 ROBO1Q9Y6N7 1651 aa13.26□□□□□ -0.29
SLC1A3-210ENST00000509272 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
SLC1A3-210ENST00000509272 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
SLC1A3-210ENST00000509272 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
SLC1A3-210ENST00000509272 RXRBP28702 533 aa13.24□□□□□ -0.29
SLC1A3-210ENST00000509272 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
SLC1A3-210ENST00000509272 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
SLC1A3-210ENST00000509272 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
SLC1A3-210ENST00000509272 DEPDC5O75140 1603 aa13.23□□□□□ -0.29
SLC1A3-210ENST00000509272 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
SLC1A3-210ENST00000509272 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
SLC1A3-210ENST00000509272 MED14O60244 1454 aa13.22□□□□□ -0.29
SLC1A3-210ENST00000509272 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
SLC1A3-210ENST00000509272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLC1A3-210ENST00000509272 ARHGAP5Q13017 1502 aa13.19□□□□□ -0.3
SLC1A3-210ENST00000509272 FOXD1Q16676 465 aa13.19□□□□□ -0.3
SLC1A3-210ENST00000509272 ABCC1P33527 1531 aa13.18□□□□□ -0.3
SLC1A3-210ENST00000509272 LRP6O75581 1613 aa13.18□□□□□ -0.3
SLC1A3-210ENST00000509272 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
SLC1A3-210ENST00000509272 JCADQ9P266 1359 aa13.17□□□□□ -0.3
SLC1A3-210ENST00000509272 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms