RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 MAGI2Q86UL8 1455 aa17.72■□□□□ 0.43
TUSC3-208ENST00000509177 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
TUSC3-208ENST00000509177 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
TUSC3-208ENST00000509177 MLECQ14165 292 aa17.69■□□□□ 0.42
TUSC3-208ENST00000509177 PLCH2O75038 1416 aa17.69■□□□□ 0.42
TUSC3-208ENST00000509177 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
TUSC3-208ENST00000509177 FER1L4A9Z1Z3 1794 aa17.67■□□□□ 0.42
TUSC3-208ENST00000509177 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
TUSC3-208ENST00000509177 ATP10AO60312 1499 aa17.64■□□□□ 0.41
TUSC3-208ENST00000509177 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
TUSC3-208ENST00000509177 FMN1Q68DA7 1419 aa17.64■□□□□ 0.41
TUSC3-208ENST00000509177 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
TUSC3-208ENST00000509177 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
TUSC3-208ENST00000509177 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
TUSC3-208ENST00000509177 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
TUSC3-208ENST00000509177 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
TUSC3-208ENST00000509177 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
TUSC3-208ENST00000509177 KIF14Q15058 1648 aa17.58■□□□□ 0.41
TUSC3-208ENST00000509177 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
TUSC3-208ENST00000509177 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
TUSC3-208ENST00000509177 AFAP1Q8N556 730 aa17.56■□□□□ 0.4
TUSC3-208ENST00000509177 ZNF518AQ6AHZ1 1483 aa17.56■□□□□ 0.4
TUSC3-208ENST00000509177 KDM5CP41229 1560 aa17.54■□□□□ 0.4
TUSC3-208ENST00000509177 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
TUSC3-208ENST00000509177 TROQ12816 1431 aaPredicted RBP17.53■□□□□ 0.4
TUSC3-208ENST00000509177 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
TUSC3-208ENST00000509177 DIP2CQ9Y2E4 1556 aa17.51■□□□□ 0.39
TUSC3-208ENST00000509177 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
TUSC3-208ENST00000509177 CLIP1P30622 1438 aa17.48■□□□□ 0.39
TUSC3-208ENST00000509177 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
TUSC3-208ENST00000509177 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
TUSC3-208ENST00000509177 REREQ9P2R6 1566 aa17.48■□□□□ 0.39
TUSC3-208ENST00000509177 ABCA6Q8N139 1617 aa17.47■□□□□ 0.39
TUSC3-208ENST00000509177 CDC42BPBQ9Y5S2 1711 aa17.47■□□□□ 0.39
TUSC3-208ENST00000509177 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
TUSC3-208ENST00000509177 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
TUSC3-208ENST00000509177 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
TUSC3-208ENST00000509177 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
TUSC3-208ENST00000509177 C3P01024 1663 aa17.45■□□□□ 0.38
TUSC3-208ENST00000509177 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
TUSC3-208ENST00000509177 ABCC1P33527 1531 aa17.43■□□□□ 0.38
TUSC3-208ENST00000509177 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
TUSC3-208ENST00000509177 AGLP35573 1532 aa17.42■□□□□ 0.38
TUSC3-208ENST00000509177 PTPRTO14522 1441 aa17.41■□□□□ 0.38
TUSC3-208ENST00000509177 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
TUSC3-208ENST00000509177 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
TUSC3-208ENST00000509177 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
TUSC3-208ENST00000509177 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
TUSC3-208ENST00000509177 KIDINS220Q9ULH0 1771 aa17.39■□□□□ 0.37
TUSC3-208ENST00000509177 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
TUSC3-208ENST00000509177 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
TUSC3-208ENST00000509177 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
TUSC3-208ENST00000509177 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
TUSC3-208ENST00000509177 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
TUSC3-208ENST00000509177 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
TUSC3-208ENST00000509177 SAMD9LQ8IVG5 1584 aa17.33■□□□□ 0.37
TUSC3-208ENST00000509177 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
TUSC3-208ENST00000509177 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
TUSC3-208ENST00000509177 SOCS7O14512 581 aa17.31■□□□□ 0.36
TUSC3-208ENST00000509177 NPATQ14207 1427 aa17.3■□□□□ 0.36
TUSC3-208ENST00000509177 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
TUSC3-208ENST00000509177 MROH2AA6NES4 1674 aa17.29■□□□□ 0.36
TUSC3-208ENST00000509177 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
TUSC3-208ENST00000509177 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
TUSC3-208ENST00000509177 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
TUSC3-208ENST00000509177 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
TUSC3-208ENST00000509177 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
TUSC3-208ENST00000509177 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
TUSC3-208ENST00000509177 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
TUSC3-208ENST00000509177 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
TUSC3-208ENST00000509177 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
TUSC3-208ENST00000509177 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.35
TUSC3-208ENST00000509177 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
TUSC3-208ENST00000509177 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
TUSC3-208ENST00000509177 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
TUSC3-208ENST00000509177 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
TUSC3-208ENST00000509177 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
TUSC3-208ENST00000509177 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
TUSC3-208ENST00000509177 KIAA1107Q9UPP5 1409 aa17.22■□□□□ 0.35
TUSC3-208ENST00000509177 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
TUSC3-208ENST00000509177 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
TUSC3-208ENST00000509177 A2MP01023 1474 aa17.22■□□□□ 0.35
TUSC3-208ENST00000509177 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
TUSC3-208ENST00000509177 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
TUSC3-208ENST00000509177 PTPRKQ15262 1439 aa17.21■□□□□ 0.34
TUSC3-208ENST00000509177 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
TUSC3-208ENST00000509177 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
TUSC3-208ENST00000509177 GGT6Q6P531 493 aa17.19■□□□□ 0.34
TUSC3-208ENST00000509177 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
TUSC3-208ENST00000509177 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
TUSC3-208ENST00000509177 PKD2Q13563 968 aa17.18■□□□□ 0.34
TUSC3-208ENST00000509177 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
TUSC3-208ENST00000509177 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
TUSC3-208ENST00000509177 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
TUSC3-208ENST00000509177 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
TUSC3-208ENST00000509177 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
TUSC3-208ENST00000509177 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
TUSC3-208ENST00000509177 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
TUSC3-208ENST00000509177 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
TUSC3-208ENST00000509177 A2ML1A8K2U0 1454 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms