RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
SEC31A-228ENST00000509142 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
SEC31A-228ENST00000509142 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
SEC31A-228ENST00000509142 PLEKHD1A6NEE1 506 aa15.41■□□□□ 0.06
SEC31A-228ENST00000509142 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
SEC31A-228ENST00000509142 DAPK1P53355 1430 aa15.4■□□□□ 0.06
SEC31A-228ENST00000509142 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
SEC31A-228ENST00000509142 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
SEC31A-228ENST00000509142 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
SEC31A-228ENST00000509142 BCANQ96GW7 911 aa15.38■□□□□ 0.05
SEC31A-228ENST00000509142 KDM6BO15054 1643 aa15.38■□□□□ 0.05
SEC31A-228ENST00000509142 ABCC5O15440 1437 aa15.37■□□□□ 0.05
SEC31A-228ENST00000509142 ROCK1Q13464 1354 aa15.37■□□□□ 0.05
SEC31A-228ENST00000509142 GCC2Q8IWJ2 1684 aa15.36■□□□□ 0.05
SEC31A-228ENST00000509142 L3MBTL2Q969R5 705 aa15.35■□□□□ 0.05
SEC31A-228ENST00000509142 FKBP8Q14318 412 aa15.34■□□□□ 0.05
SEC31A-228ENST00000509142 NUP160Q12769 1436 aa15.34■□□□□ 0.05
SEC31A-228ENST00000509142 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
SEC31A-228ENST00000509142 CCER2I3L3R5 266 aa15.33■□□□□ 0.05
SEC31A-228ENST00000509142 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
SEC31A-228ENST00000509142 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SEC31A-228ENST00000509142 CAMSAP2Q08AD1 1489 aa15.3■□□□□ 0.04
SEC31A-228ENST00000509142 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
SEC31A-228ENST00000509142 TSPY4P0CV99 314 aa15.29■□□□□ 0.04
SEC31A-228ENST00000509142 TSPY10P0CW01 314 aa15.29■□□□□ 0.04
SEC31A-228ENST00000509142 ANKRD30AQ9BXX3 1397 aa15.28■□□□□ 0.04
SEC31A-228ENST00000509142 PTPRGP23470 1445 aa15.27■□□□□ 0.04
SEC31A-228ENST00000509142 ANKRD30BQ9BXX2 1392 aa15.27■□□□□ 0.04
SEC31A-228ENST00000509142 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
SEC31A-228ENST00000509142 MYT1Q01538 1121 aa15.26■□□□□ 0.03
SEC31A-228ENST00000509142 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
SEC31A-228ENST00000509142 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
SEC31A-228ENST00000509142 ZNF326Q5BKZ1 582 aaKnown RBP15.24■□□□□ 0.03
SEC31A-228ENST00000509142 KIF14Q15058 1648 aa15.24■□□□□ 0.03
SEC31A-228ENST00000509142 PKD2Q13563 968 aa15.24■□□□□ 0.03
SEC31A-228ENST00000509142 ATP10BO94823 1461 aa15.24■□□□□ 0.03
SEC31A-228ENST00000509142 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
SEC31A-228ENST00000509142 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.038e-7■■■■□ 21
SEC31A-228ENST00000509142 RPRD2Q5VT52 1461 aaKnown RBP15.22■□□□□ 0.03
SEC31A-228ENST00000509142 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.03
SEC31A-228ENST00000509142 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
SEC31A-228ENST00000509142 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
SEC31A-228ENST00000509142 NEFLP07196 543 aa15.2■□□□□ 0.02
SEC31A-228ENST00000509142 ABCA8O94911 1581 aa15.19■□□□□ 0.02
SEC31A-228ENST00000509142 NUP155O75694 1391 aa15.19■□□□□ 0.02
SEC31A-228ENST00000509142 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
SEC31A-228ENST00000509142 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
SEC31A-228ENST00000509142 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
SEC31A-228ENST00000509142 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
SEC31A-228ENST00000509142 PZPP20742 1482 aa15.16■□□□□ 0.02
SEC31A-228ENST00000509142 ADGRL2O95490 1459 aa15.16■□□□□ 0.02
SEC31A-228ENST00000509142 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEC31A-228ENST00000509142 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
SEC31A-228ENST00000509142 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
SEC31A-228ENST00000509142 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
SEC31A-228ENST00000509142 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
SEC31A-228ENST00000509142 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
SEC31A-228ENST00000509142 RSPH4AQ5TD94 716 aa15.12■□□□□ 0.01
SEC31A-228ENST00000509142 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
SEC31A-228ENST00000509142 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
SEC31A-228ENST00000509142 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
SEC31A-228ENST00000509142 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
SEC31A-228ENST00000509142 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
SEC31A-228ENST00000509142 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
SEC31A-228ENST00000509142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.014e-7■■□□□ 12.2
SEC31A-228ENST00000509142 SHANK2Q9UPX8 1470 aa15.09■□□□□ 0.01
SEC31A-228ENST00000509142 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0.01
SEC31A-228ENST00000509142 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
SEC31A-228ENST00000509142 CROCC2H7BZ55 1655 aa15.08■□□□□ 0
SEC31A-228ENST00000509142 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
SEC31A-228ENST00000509142 MRS2Q9HD23 443 aa15.07■□□□□ 0
SEC31A-228ENST00000509142 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
SEC31A-228ENST00000509142 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
SEC31A-228ENST00000509142 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
SEC31A-228ENST00000509142 CHD1O14646 1710 aa15.06■□□□□ 0
SEC31A-228ENST00000509142 CCDC141Q6ZP82 1450 aa15.05■□□□□ 0
SEC31A-228ENST00000509142 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
SEC31A-228ENST00000509142 USP47Q96K76 1375 aa15.05■□□□□ -0
SEC31A-228ENST00000509142 ARHGAP5Q13017 1502 aa15.04■□□□□ -0
SEC31A-228ENST00000509142 MBD5Q9P267 1494 aa15.03■□□□□ -0
SEC31A-228ENST00000509142 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
SEC31A-228ENST00000509142 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
SEC31A-228ENST00000509142 EFCAB2Q5VUJ9 269 aa15□□□□□ -0.01
SEC31A-228ENST00000509142 MSH5O43196 834 aa14.99□□□□□ -0.01
SEC31A-228ENST00000509142 SAMD9LQ8IVG5 1584 aa14.99□□□□□ -0.01
SEC31A-228ENST00000509142 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
SEC31A-228ENST00000509142 BCORL1Q5H9F3 1711 aa14.98□□□□□ -0.01
SEC31A-228ENST00000509142 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
SEC31A-228ENST00000509142 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
SEC31A-228ENST00000509142 PREX2Q70Z35 1606 aa14.97□□□□□ -0.01
SEC31A-228ENST00000509142 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
SEC31A-228ENST00000509142 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
SEC31A-228ENST00000509142 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
SEC31A-228ENST00000509142 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
SEC31A-228ENST00000509142 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
SEC31A-228ENST00000509142 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
SEC31A-228ENST00000509142 DHX29Q7Z478 1369 aaKnown RBP14.95□□□□□ -0.02
SEC31A-228ENST00000509142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.95□□□□□ -0.02
SEC31A-228ENST00000509142 ROCK2O75116 1388 aaKnown RBP14.94□□□□□ -0.02
SEC31A-228ENST00000509142 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms