RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
COPS4-206ENST00000509093 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
COPS4-206ENST00000509093 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
COPS4-206ENST00000509093 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
COPS4-206ENST00000509093 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
COPS4-206ENST00000509093 ZCCHC11Q5TAX3 1644 aaKnown RBP16.15■□□□□ 0.18
COPS4-206ENST00000509093 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
COPS4-206ENST00000509093 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
COPS4-206ENST00000509093 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
COPS4-206ENST00000509093 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
COPS4-206ENST00000509093 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
COPS4-206ENST00000509093 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
COPS4-206ENST00000509093 RRP7BPQ9NSQ0 103 aa16.11■□□□□ 0.17
COPS4-206ENST00000509093 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
COPS4-206ENST00000509093 ABCC5O15440 1437 aa16.1■□□□□ 0.17
COPS4-206ENST00000509093 DAPK1P53355 1430 aa16.1■□□□□ 0.17
COPS4-206ENST00000509093 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
COPS4-206ENST00000509093 NAIPQ13075 1403 aa16.09■□□□□ 0.17
COPS4-206ENST00000509093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS4-206ENST00000509093 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.17
COPS4-206ENST00000509093 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
COPS4-206ENST00000509093 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
COPS4-206ENST00000509093 PREX2Q70Z35 1606 aa16.02■□□□□ 0.16
COPS4-206ENST00000509093 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.16
COPS4-206ENST00000509093 KDM6BO15054 1643 aa16.02■□□□□ 0.15
COPS4-206ENST00000509093 AKNAQ7Z591 1439 aa16.01■□□□□ 0.15
COPS4-206ENST00000509093 MAPKBP1O60336 1514 aa16.01■□□□□ 0.15
COPS4-206ENST00000509093 SAMD9LQ8IVG5 1584 aa16.01■□□□□ 0.15
COPS4-206ENST00000509093 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
COPS4-206ENST00000509093 ASXL2Q76L83 1435 aa16■□□□□ 0.15
COPS4-206ENST00000509093 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
COPS4-206ENST00000509093 ROCK1Q13464 1354 aa15.99■□□□□ 0.15
COPS4-206ENST00000509093 GCC2Q8IWJ2 1684 aa15.98■□□□□ 0.15
COPS4-206ENST00000509093 MBD5Q9P267 1494 aa15.98■□□□□ 0.15
COPS4-206ENST00000509093 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
COPS4-206ENST00000509093 PLCH2O75038 1416 aa15.97■□□□□ 0.15
COPS4-206ENST00000509093 MYO5CQ9NQX4 1742 aa15.96■□□□□ 0.15
COPS4-206ENST00000509093 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
COPS4-206ENST00000509093 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.15
COPS4-206ENST00000509093 NCOA1Q15788 1441 aa15.96■□□□□ 0.14
COPS4-206ENST00000509093 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
COPS4-206ENST00000509093 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
COPS4-206ENST00000509093 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
COPS4-206ENST00000509093 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
COPS4-206ENST00000509093 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
COPS4-206ENST00000509093 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
COPS4-206ENST00000509093 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
COPS4-206ENST00000509093 ADGRL2O95490 1459 aa15.92■□□□□ 0.14
COPS4-206ENST00000509093 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
COPS4-206ENST00000509093 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
COPS4-206ENST00000509093 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
COPS4-206ENST00000509093 ADGBQ8N7X0 1667 aa15.91■□□□□ 0.14
COPS4-206ENST00000509093 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
COPS4-206ENST00000509093 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
COPS4-206ENST00000509093 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
COPS4-206ENST00000509093 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
COPS4-206ENST00000509093 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
COPS4-206ENST00000509093 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
COPS4-206ENST00000509093 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
COPS4-206ENST00000509093 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
COPS4-206ENST00000509093 RSPH4AQ5TD94 716 aa15.86■□□□□ 0.13
COPS4-206ENST00000509093 PLEKHH2Q8IVE3 1493 aa15.86■□□□□ 0.13
COPS4-206ENST00000509093 TRAPPC8Q9Y2L5 1435 aa15.86■□□□□ 0.13
COPS4-206ENST00000509093 MPHOSPH9Q99550 1183 aa15.85■□□□□ 0.13
COPS4-206ENST00000509093 ABCC1P33527 1531 aa15.85■□□□□ 0.13
COPS4-206ENST00000509093 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
COPS4-206ENST00000509093 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
COPS4-206ENST00000509093 FOXD1Q16676 465 aa15.84■□□□□ 0.13
COPS4-206ENST00000509093 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
COPS4-206ENST00000509093 FANCAO15360 1455 aa15.84■□□□□ 0.13
COPS4-206ENST00000509093 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
COPS4-206ENST00000509093 MAST1Q9Y2H9 1570 aa15.8■□□□□ 0.12
COPS4-206ENST00000509093 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
COPS4-206ENST00000509093 PZPP20742 1482 aa15.8■□□□□ 0.12
COPS4-206ENST00000509093 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
COPS4-206ENST00000509093 SCAPERQ9BY12 1400 aa15.78■□□□□ 0.12
COPS4-206ENST00000509093 ADGRL1O94910 1474 aa15.77■□□□□ 0.12
COPS4-206ENST00000509093 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
COPS4-206ENST00000509093 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
COPS4-206ENST00000509093 NUP155O75694 1391 aa15.75■□□□□ 0.11
COPS4-206ENST00000509093 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
COPS4-206ENST00000509093 BCANQ96GW7 911 aa15.74■□□□□ 0.11
COPS4-206ENST00000509093 FKBP8Q14318 412 aa15.73■□□□□ 0.11
COPS4-206ENST00000509093 ANKRD30BQ9BXX2 1392 aa15.73■□□□□ 0.11
COPS4-206ENST00000509093 ZFYVE16Q7Z3T8 1539 aa15.72■□□□□ 0.11
COPS4-206ENST00000509093 PKD2Q13563 968 aa15.71■□□□□ 0.11
COPS4-206ENST00000509093 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
COPS4-206ENST00000509093 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
COPS4-206ENST00000509093 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
COPS4-206ENST00000509093 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
COPS4-206ENST00000509093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPS4-206ENST00000509093 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
COPS4-206ENST00000509093 MYT1LQ9UL68 1186 aa15.69■□□□□ 0.1
COPS4-206ENST00000509093 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
COPS4-206ENST00000509093 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
COPS4-206ENST00000509093 INO80Q9ULG1 1556 aaPredicted RBP15.68■□□□□ 0.1
COPS4-206ENST00000509093 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
COPS4-206ENST00000509093 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
COPS4-206ENST00000509093 GLI2P10070 1586 aa15.67■□□□□ 0.1
COPS4-206ENST00000509093 NEFLP07196 543 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms