RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 KANK1Q14678 1352 aa11.6□□□□□ -0.55
KLHL3-209ENST00000508657 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
KLHL3-209ENST00000508657 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
KLHL3-209ENST00000508657 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
KLHL3-209ENST00000508657 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
KLHL3-209ENST00000508657 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
KLHL3-209ENST00000508657 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
KLHL3-209ENST00000508657 PIP4K2BP78356 416 aa11.56□□□□□ -0.56
KLHL3-209ENST00000508657 MORC1Q86VD1 984 aa11.55□□□□□ -0.56
KLHL3-209ENST00000508657 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
KLHL3-209ENST00000508657 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
KLHL3-209ENST00000508657 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
KLHL3-209ENST00000508657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
KLHL3-209ENST00000508657 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
KLHL3-209ENST00000508657 NUTM2BA6NNL0 878 aaPredicted RBP11.53□□□□□ -0.56
KLHL3-209ENST00000508657 NUTM2EB1AL46 878 aaPredicted RBP11.53□□□□□ -0.56
KLHL3-209ENST00000508657 NUTM2AQ8IVF1 878 aaPredicted RBP11.53□□□□□ -0.56
KLHL3-209ENST00000508657 GOLGA6L4A6NEF3 574 aa11.53□□□□□ -0.56
KLHL3-209ENST00000508657 BECN1Q14457 450 aa11.52□□□□□ -0.56
KLHL3-209ENST00000508657 MARCH6O60337 910 aa11.52□□□□□ -0.57
KLHL3-209ENST00000508657 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
KLHL3-209ENST00000508657 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
KLHL3-209ENST00000508657 AMPHP49418 695 aa11.52□□□□□ -0.57
KLHL3-209ENST00000508657 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
KLHL3-209ENST00000508657 RASSF8Q8NHQ8 419 aa11.51□□□□□ -0.57
KLHL3-209ENST00000508657 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
KLHL3-209ENST00000508657 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
KLHL3-209ENST00000508657 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
KLHL3-209ENST00000508657 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
KLHL3-209ENST00000508657 FOXD1Q16676 465 aa11.48□□□□□ -0.57
KLHL3-209ENST00000508657 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
KLHL3-209ENST00000508657 KIF3BO15066 747 aa11.47□□□□□ -0.57
KLHL3-209ENST00000508657 NOC3LQ8WTT2 800 aaKnown RBP11.47□□□□□ -0.57
KLHL3-209ENST00000508657 TCEAL9Q9UHQ7 104 aa11.47□□□□□ -0.57
KLHL3-209ENST00000508657 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
KLHL3-209ENST00000508657 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
KLHL3-209ENST00000508657 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
KLHL3-209ENST00000508657 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
KLHL3-209ENST00000508657 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
KLHL3-209ENST00000508657 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
KLHL3-209ENST00000508657 TMF1P82094 1093 aa11.44□□□□□ -0.58
KLHL3-209ENST00000508657 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
KLHL3-209ENST00000508657 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
KLHL3-209ENST00000508657 U2AF1L5P0DN76 240 aaPredicted RBP11.44□□□□□ -0.58
KLHL3-209ENST00000508657 U2AF1Q01081 240 aaKnown RBP eCLIP11.44□□□□□ -0.58
KLHL3-209ENST00000508657 KIAA2012Q0VF49 1180 aa11.44□□□□□ -0.58
KLHL3-209ENST00000508657 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
KLHL3-209ENST00000508657 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
KLHL3-209ENST00000508657 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
KLHL3-209ENST00000508657 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
KLHL3-209ENST00000508657 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
KLHL3-209ENST00000508657 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
KLHL3-209ENST00000508657 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
KLHL3-209ENST00000508657 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
KLHL3-209ENST00000508657 CLIP1P30622 1438 aa11.41□□□□□ -0.58
KLHL3-209ENST00000508657 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
KLHL3-209ENST00000508657 DHX16O60231 1041 aaKnown RBP11.4□□□□□ -0.58
KLHL3-209ENST00000508657 CCAR1Q8IX12 1150 aaKnown RBP11.4□□□□□ -0.58
KLHL3-209ENST00000508657 BAZ1BQ9UIG0 1483 aaKnown RBP11.4□□□□□ -0.59
KLHL3-209ENST00000508657 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
KLHL3-209ENST00000508657 MCCP23508 829 aa11.39□□□□□ -0.59
KLHL3-209ENST00000508657 MTMR7Q9Y216 660 aa11.39□□□□□ -0.59
KLHL3-209ENST00000508657 HNRNPMP52272 730 aaKnown RBP eCLIP11.39□□□□□ -0.59
KLHL3-209ENST00000508657 PSME1Q06323 249 aa11.39□□□□□ -0.59
KLHL3-209ENST00000508657 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
KLHL3-209ENST00000508657 STK31Q9BXU1 1019 aa11.39□□□□□ -0.59
KLHL3-209ENST00000508657 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
KLHL3-209ENST00000508657 FYB1O15117 783 aa11.38□□□□□ -0.59
KLHL3-209ENST00000508657 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
KLHL3-209ENST00000508657 ATF3P18847 181 aa11.38□□□□□ -0.59
KLHL3-209ENST00000508657 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
KLHL3-209ENST00000508657 PES1O00541 588 aaKnown RBP11.37□□□□□ -0.59
KLHL3-209ENST00000508657 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
KLHL3-209ENST00000508657 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
KLHL3-209ENST00000508657 EIF2S2P20042 333 aaKnown RBP11.37□□□□□ -0.59
KLHL3-209ENST00000508657 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
KLHL3-209ENST00000508657 SUPT16HQ9Y5B9 1047 aaKnown RBP11.36□□□□□ -0.59
KLHL3-209ENST00000508657 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
KLHL3-209ENST00000508657 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
KLHL3-209ENST00000508657 RBM33Q96EV2 1170 aaKnown RBP11.35□□□□□ -0.59
KLHL3-209ENST00000508657 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
KLHL3-209ENST00000508657 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
KLHL3-209ENST00000508657 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
KLHL3-209ENST00000508657 ANP32EQ9BTT0 268 aa11.35□□□□□ -0.59
KLHL3-209ENST00000508657 DDRGK1Q96HY6 314 aa11.35□□□□□ -0.59
KLHL3-209ENST00000508657 CCDC146Q8IYE0 955 aa11.34□□□□□ -0.59
KLHL3-209ENST00000508657 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
KLHL3-209ENST00000508657 MIER1Q8N108 512 aa11.34□□□□□ -0.59
KLHL3-209ENST00000508657 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
KLHL3-209ENST00000508657 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
KLHL3-209ENST00000508657 PKD2Q13563 968 aa11.33□□□□□ -0.6
KLHL3-209ENST00000508657 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
KLHL3-209ENST00000508657 CHMP4BQ9H444 224 aaKnown RBP11.33□□□□□ -0.6
KLHL3-209ENST00000508657 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
KLHL3-209ENST00000508657 NRDCO43847 1150 aa11.32□□□□□ -0.6
KLHL3-209ENST00000508657 RB1CC1Q8TDY2 1594 aa11.32□□□□□ -0.6
KLHL3-209ENST00000508657 EFCAB2Q5VUJ9 269 aa11.32□□□□□ -0.6
KLHL3-209ENST00000508657 PLIN1O60240 522 aa11.32□□□□□ -0.6
KLHL3-209ENST00000508657 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
KLHL3-209ENST00000508657 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms