RNA–Protein interactions for RNA: ENST00000507723.1

TMED9-204, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-204ENST00000507723 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
TMED9-204ENST00000507723 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
TMED9-204ENST00000507723 EFCAB2Q5VUJ9 269 aa23.72■■□□□ 1.39
TMED9-204ENST00000507723 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
TMED9-204ENST00000507723 ATP10AO60312 1499 aa23.69■■□□□ 1.38
TMED9-204ENST00000507723 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
TMED9-204ENST00000507723 C9orf84Q5VXU9 1444 aa23.68■■□□□ 1.38
TMED9-204ENST00000507723 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
TMED9-204ENST00000507723 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
TMED9-204ENST00000507723 CERKQ8TCT0 537 aa23.65■■□□□ 1.38
TMED9-204ENST00000507723 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.38
TMED9-204ENST00000507723 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.38
TMED9-204ENST00000507723 ZNF518AQ6AHZ1 1483 aa23.63■■□□□ 1.37
TMED9-204ENST00000507723 MYO5CQ9NQX4 1742 aa23.62■■□□□ 1.37
TMED9-204ENST00000507723 CLIP1P30622 1438 aa23.61■■□□□ 1.37
TMED9-204ENST00000507723 KIF14Q15058 1648 aa23.6■■□□□ 1.37
TMED9-204ENST00000507723 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
TMED9-204ENST00000507723 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
TMED9-204ENST00000507723 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
TMED9-204ENST00000507723 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.36
TMED9-204ENST00000507723 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
TMED9-204ENST00000507723 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
TMED9-204ENST00000507723 UHRF1BP1Q6BDS2 1440 aa23.54■■□□□ 1.36
TMED9-204ENST00000507723 KDM5CP41229 1560 aa23.53■■□□□ 1.36
TMED9-204ENST00000507723 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
TMED9-204ENST00000507723 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
TMED9-204ENST00000507723 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
TMED9-204ENST00000507723 ESF1Q9H501 851 aaKnown RBP23.51■■□□□ 1.35
TMED9-204ENST00000507723 REREQ9P2R6 1566 aa23.49■■□□□ 1.35
TMED9-204ENST00000507723 MLH3Q9UHC1 1453 aa23.47■■□□□ 1.35
TMED9-204ENST00000507723 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
TMED9-204ENST00000507723 SETD1BQ9UPS6 1966 aaKnown RBP23.43■■□□□ 1.34
TMED9-204ENST00000507723 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
TMED9-204ENST00000507723 AGLP35573 1532 aa23.42■■□□□ 1.34
TMED9-204ENST00000507723 PTPRTO14522 1441 aa23.4■■□□□ 1.34
TMED9-204ENST00000507723 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
TMED9-204ENST00000507723 ABCA6Q8N139 1617 aa23.39■■□□□ 1.33
TMED9-204ENST00000507723 TRAPPC8Q9Y2L5 1435 aa23.39■■□□□ 1.33
TMED9-204ENST00000507723 ABCC1P33527 1531 aa23.38■■□□□ 1.33
TMED9-204ENST00000507723 PREX2Q70Z35 1606 aa23.38■■□□□ 1.33
TMED9-204ENST00000507723 STRCQ7RTU9 1775 aa23.38■■□□□ 1.33
TMED9-204ENST00000507723 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
TMED9-204ENST00000507723 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
TMED9-204ENST00000507723 C3P01024 1663 aa23.35■■□□□ 1.33
TMED9-204ENST00000507723 DISP3Q9P2K9 1392 aa23.34■■□□□ 1.33
TMED9-204ENST00000507723 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
TMED9-204ENST00000507723 LRRIQ1Q96JM4 1722 aa23.32■■□□□ 1.32
TMED9-204ENST00000507723 NPATQ14207 1427 aa23.28■■□□□ 1.32
TMED9-204ENST00000507723 IQSEC2Q5JU85 1478 aa23.28■■□□□ 1.32
TMED9-204ENST00000507723 NCOA1Q15788 1441 aa23.27■■□□□ 1.32
TMED9-204ENST00000507723 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.32
TMED9-204ENST00000507723 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
TMED9-204ENST00000507723 ZNF777Q9ULD5 760 aaPredicted RBP23.26■■□□□ 1.31
TMED9-204ENST00000507723 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
TMED9-204ENST00000507723 SAMD9LQ8IVG5 1584 aa23.24■■□□□ 1.31
TMED9-204ENST00000507723 CDC42BPAQ5VT25 1732 aa23.23■■□□□ 1.31
TMED9-204ENST00000507723 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
TMED9-204ENST00000507723 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
TMED9-204ENST00000507723 PLEKHH2Q8IVE3 1493 aa23.22■■□□□ 1.31
TMED9-204ENST00000507723 SOCS7O14512 581 aa23.21■■□□□ 1.31
TMED9-204ENST00000507723 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
TMED9-204ENST00000507723 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
TMED9-204ENST00000507723 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
TMED9-204ENST00000507723 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
TMED9-204ENST00000507723 GPATCH8Q9UKJ3 1502 aaKnown RBP23.18■■□□□ 1.3
TMED9-204ENST00000507723 CFDP1Q9UEE9 299 aaPredicted RBP23.18■■□□□ 1.3
TMED9-204ENST00000507723 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.3
TMED9-204ENST00000507723 ILDR2Q71H61 639 aa23.17■■□□□ 1.3
TMED9-204ENST00000507723 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
TMED9-204ENST00000507723 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
TMED9-204ENST00000507723 PKD2Q13563 968 aa23.15■■□□□ 1.3
TMED9-204ENST00000507723 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
TMED9-204ENST00000507723 A2MP01023 1474 aa23.14■■□□□ 1.29
TMED9-204ENST00000507723 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
TMED9-204ENST00000507723 PLA2R1Q13018 1463 aa23.12■■□□□ 1.29
TMED9-204ENST00000507723 SUPT6HQ7KZ85 1726 aaKnown RBP23.12■■□□□ 1.29
TMED9-204ENST00000507723 PLXNC1O60486 1568 aa23.11■■□□□ 1.29
TMED9-204ENST00000507723 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
TMED9-204ENST00000507723 GGT6Q6P531 493 aa23.1■■□□□ 1.29
TMED9-204ENST00000507723 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
TMED9-204ENST00000507723 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
TMED9-204ENST00000507723 CLTCQ00610 1675 aaKnown RBP23.08■■□□□ 1.29
TMED9-204ENST00000507723 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
TMED9-204ENST00000507723 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
TMED9-204ENST00000507723 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
TMED9-204ENST00000507723 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
TMED9-204ENST00000507723 ZNF335Q9H4Z2 1342 aaPredicted RBP23.07■■□□□ 1.28
TMED9-204ENST00000507723 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
TMED9-204ENST00000507723 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
TMED9-204ENST00000507723 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
TMED9-204ENST00000507723 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
TMED9-204ENST00000507723 A2ML1A8K2U0 1454 aa22.98■■□□□ 1.27
TMED9-204ENST00000507723 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
TMED9-204ENST00000507723 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
TMED9-204ENST00000507723 MBD5Q9P267 1494 aa22.95■■□□□ 1.26
TMED9-204ENST00000507723 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
TMED9-204ENST00000507723 ZNF644Q9H582 1327 aaPredicted RBP22.94■■□□□ 1.26
TMED9-204ENST00000507723 FAM135AQ9P2D6 1515 aa22.93■■□□□ 1.26
TMED9-204ENST00000507723 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
TMED9-204ENST00000507723 CEP162Q5TB80 1403 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms