RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 GCC2Q8IWJ2 1684 aa31.19■■■□□ 2.58
SPCS3-203ENST00000507678 CFDP1Q9UEE9 299 aaPredicted RBP31.18■■■□□ 2.58
SPCS3-203ENST00000507678 DENND4BO75064 1496 aaPredicted RBP31.17■■■□□ 2.58
SPCS3-203ENST00000507678 ABCC5O15440 1437 aa31.15■■■□□ 2.58
SPCS3-203ENST00000507678 CARMIL2Q6F5E8 1435 aa31.14■■■□□ 2.58
SPCS3-203ENST00000507678 AKNAQ7Z591 1439 aa31.12■■■□□ 2.57
SPCS3-203ENST00000507678 TROQ12816 1431 aaPredicted RBP31.11■■■□□ 2.57
SPCS3-203ENST00000507678 ANP32CO43423 234 aa31.08■■■□□ 2.57
SPCS3-203ENST00000507678 SLC4A1APQ9BWU0 796 aaKnown RBP31.07■■■□□ 2.56
SPCS3-203ENST00000507678 NUP160Q12769 1436 aa31.06■■■□□ 2.56
SPCS3-203ENST00000507678 KDM5BQ9UGL1 1544 aa31.06■■■□□ 2.56
SPCS3-203ENST00000507678 L3MBTL2Q969R5 705 aa31.05■■■□□ 2.56
SPCS3-203ENST00000507678 DNMT1P26358 1616 aaKnown RBP31.04■■■□□ 2.56
SPCS3-203ENST00000507678 KIF14Q15058 1648 aa31.04■■■□□ 2.56
SPCS3-203ENST00000507678 ROCK1Q13464 1354 aa31.01■■■□□ 2.56
SPCS3-203ENST00000507678 CAMSAP2Q08AD1 1489 aa31.01■■■□□ 2.56
SPCS3-203ENST00000507678 PLEKHD1A6NEE1 506 aa31.01■■■□□ 2.55
SPCS3-203ENST00000507678 HSPA5P11021 654 aaKnown RBP31■■■□□ 2.55
SPCS3-203ENST00000507678 GPATCH8Q9UKJ3 1502 aaKnown RBP30.99■■■□□ 2.55
SPCS3-203ENST00000507678 SUPT16HQ9Y5B9 1047 aaKnown RBP30.91■■■□□ 2.54
SPCS3-203ENST00000507678 ANKRD30BQ9BXX2 1392 aa30.9■■■□□ 2.54
SPCS3-203ENST00000507678 EIF4G2P78344 907 aaKnown RBP eCLIP30.9■■■□□ 2.54
SPCS3-203ENST00000507678 ATP10BO94823 1461 aa30.88■■■□□ 2.53
SPCS3-203ENST00000507678 NCOA1Q15788 1441 aa30.87■■■□□ 2.53
SPCS3-203ENST00000507678 ITSN2Q9NZM3 1697 aa30.87■■■□□ 2.53
SPCS3-203ENST00000507678 WASHC2AQ641Q2 1341 aa30.87■■■□□ 2.53
SPCS3-203ENST00000507678 NBPF8Q3BBV2 869 aa30.85■■■□□ 2.53
SPCS3-203ENST00000507678 CCER2I3L3R5 266 aa30.83■■■□□ 2.53
SPCS3-203ENST00000507678 PTPRGP23470 1445 aa30.82■■■□□ 2.52
SPCS3-203ENST00000507678 ABCA8O94911 1581 aa30.82■■■□□ 2.52
SPCS3-203ENST00000507678 ZNF326Q5BKZ1 582 aaKnown RBP30.81■■■□□ 2.52
SPCS3-203ENST00000507678 RPRD2Q5VT52 1461 aaKnown RBP30.81■■■□□ 2.52
SPCS3-203ENST00000507678 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.52
SPCS3-203ENST00000507678 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
SPCS3-203ENST00000507678 ADCY10Q96PN6 1610 aa30.79■■■□□ 2.52
SPCS3-203ENST00000507678 PKD2Q13563 968 aa30.79■■■□□ 2.52
SPCS3-203ENST00000507678 PZPP20742 1482 aa30.77■■■□□ 2.52
SPCS3-203ENST00000507678 C11orf95C9JLR9 678 aaPredicted RBP30.75■■■□□ 2.51
SPCS3-203ENST00000507678 TSPY4P0CV99 314 aa30.74■■■□□ 2.51
SPCS3-203ENST00000507678 TSPY10P0CW01 314 aa30.74■■■□□ 2.51
SPCS3-203ENST00000507678 ANKRD50Q9ULJ7 1429 aa30.73■■■□□ 2.51
SPCS3-203ENST00000507678 CDC42BPAQ5VT25 1732 aa30.72■■■□□ 2.51
SPCS3-203ENST00000507678 BCANQ96GW7 911 aa30.71■■■□□ 2.51
SPCS3-203ENST00000507678 ADGBQ8N7X0 1667 aa30.71■■■□□ 2.51
SPCS3-203ENST00000507678 ABCC10Q5T3U5 1492 aa30.71■■■□□ 2.51
SPCS3-203ENST00000507678 TEX14Q8IWB6 1497 aa30.71■■■□□ 2.51
SPCS3-203ENST00000507678 C9orf84Q5VXU9 1444 aa30.69■■■□□ 2.5
SPCS3-203ENST00000507678 ADGRL2O95490 1459 aa30.67■■■□□ 2.5
SPCS3-203ENST00000507678 NUP155O75694 1391 aa30.67■■■□□ 2.5
SPCS3-203ENST00000507678 CROCC2H7BZ55 1655 aa30.67■■■□□ 2.5
SPCS3-203ENST00000507678 CHD1O14646 1710 aa30.65■■■□□ 2.5
SPCS3-203ENST00000507678 KIAA1107Q9UPP5 1409 aa30.65■■■□□ 2.5
SPCS3-203ENST00000507678 POLR3GLQ9BT43 218 aa30.63■■■□□ 2.49
SPCS3-203ENST00000507678 CNGB1Q14028 1251 aaPredicted RBP30.63■■■□□ 2.49
SPCS3-203ENST00000507678 FKBP8Q14318 412 aa30.62■■■□□ 2.49
SPCS3-203ENST00000507678 CCDC7Q96M83 1385 aa30.6■■■□□ 2.49
SPCS3-203ENST00000507678 KIF15Q9NS87 1388 aa30.58■■■□□ 2.49
SPCS3-203ENST00000507678 HNRNPUQ00839 825 aaKnown RBP eCLIP30.58■■■□□ 2.49
SPCS3-203ENST00000507678 CNTLNQ9NXG0 1405 aa30.56■■■□□ 2.48
SPCS3-203ENST00000507678 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
SPCS3-203ENST00000507678 KDM2AQ9Y2K7 1162 aa30.54■■■□□ 2.48
SPCS3-203ENST00000507678 KIF7Q2M1P5 1343 aa30.53■■■□□ 2.48
SPCS3-203ENST00000507678 ERCC6L2Q5T890 1561 aa30.53■■■□□ 2.48
SPCS3-203ENST00000507678 SHANK2Q9UPX8 1470 aa30.5■■■□□ 2.47
SPCS3-203ENST00000507678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.48■■■□□ 2.472e-9■■■■■ 27.9
SPCS3-203ENST00000507678 MBD5Q9P267 1494 aa30.48■■■□□ 2.47
SPCS3-203ENST00000507678 NEFLP07196 543 aa30.47■■■□□ 2.47
SPCS3-203ENST00000507678 SAMD9LQ8IVG5 1584 aa30.46■■■□□ 2.47
SPCS3-203ENST00000507678 SPATA31E1Q6ZUB1 1445 aa30.46■■■□□ 2.47
SPCS3-203ENST00000507678 FAM9BQ8IZU0 186 aa30.45■■■□□ 2.46
SPCS3-203ENST00000507678 PRKRIP1Q9H875 184 aaPredicted RBP30.45■■■□□ 2.46
SPCS3-203ENST00000507678 CDC42BPBQ9Y5S2 1711 aa30.44■■■□□ 2.46
SPCS3-203ENST00000507678 ARHGAP5Q13017 1502 aa30.44■■■□□ 2.46
SPCS3-203ENST00000507678 CCDC141Q6ZP82 1450 aa30.44■■■□□ 2.46
SPCS3-203ENST00000507678 USP47Q96K76 1375 aa30.43■■■□□ 2.46
SPCS3-203ENST00000507678 DCAF11Q8TEB1 546 aa30.41■■■□□ 2.46
SPCS3-203ENST00000507678 SYCP2Q9BX26 1530 aa30.41■■■□□ 2.46
SPCS3-203ENST00000507678 MRS2Q9HD23 443 aa30.4■■■□□ 2.46
SPCS3-203ENST00000507678 TTC37Q6PGP7 1564 aa30.4■■■□□ 2.46
SPCS3-203ENST00000507678 PREX2Q70Z35 1606 aa30.39■■■□□ 2.46
SPCS3-203ENST00000507678 CARD11Q9BXL7 1154 aa30.38■■■□□ 2.45
SPCS3-203ENST00000507678 BCL11AQ9H165 835 aa30.38■■■□□ 2.45
SPCS3-203ENST00000507678 ARHGEF5Q12774 1597 aa30.37■■■□□ 2.45
SPCS3-203ENST00000507678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.36■■■□□ 2.452e-6■■■□□ 18.3
SPCS3-203ENST00000507678 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
SPCS3-203ENST00000507678 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
SPCS3-203ENST00000507678 RSPH4AQ5TD94 716 aa30.32■■■□□ 2.44
SPCS3-203ENST00000507678 ABCC2Q92887 1545 aa30.32■■■□□ 2.44
SPCS3-203ENST00000507678 IRX6P78412 446 aaPredicted RBP30.29■■■□□ 2.44
SPCS3-203ENST00000507678 FAM135AQ9P2D6 1515 aa30.28■■■□□ 2.44
SPCS3-203ENST00000507678 KDM5DQ9BY66 1539 aa30.26■■■□□ 2.43
SPCS3-203ENST00000507678 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
SPCS3-203ENST00000507678 ST20-MTHFSA0A0A6YYL1 179 aa30.24■■■□□ 2.43
SPCS3-203ENST00000507678 ANP32EQ9BTT0 268 aa30.23■■■□□ 2.43
SPCS3-203ENST00000507678 TSHZ2Q9NRE2 1034 aa30.21■■■□□ 2.43
SPCS3-203ENST00000507678 PLEKHH2Q8IVE3 1493 aa30.21■■■□□ 2.43
SPCS3-203ENST00000507678 KDM5CP41229 1560 aa30.21■■■□□ 2.43
SPCS3-203ENST00000507678 CCDC144AA2RUR9 1427 aa30.2■■■□□ 2.43
SPCS3-203ENST00000507678 SENP3-EIF4A1A0A087X0R7 540 aa30.2■■■□□ 2.43
SPCS3-203ENST00000507678 RALGAPBQ86X10 1494 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms