RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 HSPA2P54652 639 aa27.7■■■□□ 2.02
SNF8-205ENST00000507302 ATP10AO60312 1499 aa27.66■■■□□ 2.02
SNF8-205ENST00000507302 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
SNF8-205ENST00000507302 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
SNF8-205ENST00000507302 PREX1Q8TCU6 1659 aa27.62■■■□□ 2.01
SNF8-205ENST00000507302 KDM5CP41229 1560 aa27.6■■■□□ 2.01
SNF8-205ENST00000507302 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
SNF8-205ENST00000507302 CERKQ8TCT0 537 aa27.58■■■□□ 2.01
SNF8-205ENST00000507302 KIF14Q15058 1648 aa27.57■■■□□ 2
SNF8-205ENST00000507302 EFCAB2Q5VUJ9 269 aa27.57■■■□□ 2
SNF8-205ENST00000507302 ZNF518AQ6AHZ1 1483 aa27.56■■■□□ 2
SNF8-205ENST00000507302 MLECQ14165 292 aa27.55■■■□□ 2
SNF8-205ENST00000507302 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
SNF8-205ENST00000507302 REREQ9P2R6 1566 aa27.55■■■□□ 2
SNF8-205ENST00000507302 STRCQ7RTU9 1775 aa27.53■■■□□ 2
SNF8-205ENST00000507302 SETD1BQ9UPS6 1966 aaKnown RBP27.51■■■□□ 2
SNF8-205ENST00000507302 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
SNF8-205ENST00000507302 PLPPR3Q6T4P5 718 aa27.51■■□□□ 1.99
SNF8-205ENST00000507302 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
SNF8-205ENST00000507302 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
SNF8-205ENST00000507302 CDK11AQ9UQ88 783 aaPredicted RBP27.48■■□□□ 1.99
SNF8-205ENST00000507302 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
SNF8-205ENST00000507302 MLH3Q9UHC1 1453 aa27.45■■□□□ 1.99
SNF8-205ENST00000507302 ARHGAP5Q13017 1502 aa27.45■■□□□ 1.98
SNF8-205ENST00000507302 CEBPAP49715 358 aaPredicted RBP27.43■■□□□ 1.98
SNF8-205ENST00000507302 AFAP1Q8N556 730 aa27.43■■□□□ 1.98
SNF8-205ENST00000507302 AGLP35573 1532 aa27.42■■□□□ 1.98
SNF8-205ENST00000507302 ABCA6Q8N139 1617 aa27.42■■□□□ 1.98
SNF8-205ENST00000507302 C3P01024 1663 aa27.4■■□□□ 1.98
SNF8-205ENST00000507302 CLIP1P30622 1438 aa27.4■■□□□ 1.98
SNF8-205ENST00000507302 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
SNF8-205ENST00000507302 PREX2Q70Z35 1606 aa27.39■■□□□ 1.98
SNF8-205ENST00000507302 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
SNF8-205ENST00000507302 ABCC1P33527 1531 aa27.37■■□□□ 1.97
SNF8-205ENST00000507302 UBTFP17480 764 aaKnown RBP27.36■■□□□ 1.97
SNF8-205ENST00000507302 PTPRTO14522 1441 aa27.35■■□□□ 1.97
SNF8-205ENST00000507302 ATP1B4Q9UN42 357 aaPredicted RBP27.35■■□□□ 1.97
SNF8-205ENST00000507302 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
SNF8-205ENST00000507302 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.96
SNF8-205ENST00000507302 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
SNF8-205ENST00000507302 CDC42BPAQ5VT25 1732 aa27.28■■□□□ 1.96
SNF8-205ENST00000507302 CCDC18Q5T9S5 1454 aa27.28■■□□□ 1.96
SNF8-205ENST00000507302 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
SNF8-205ENST00000507302 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
SNF8-205ENST00000507302 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
SNF8-205ENST00000507302 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
SNF8-205ENST00000507302 IQSEC2Q5JU85 1478 aa27.23■■□□□ 1.95
SNF8-205ENST00000507302 NCOA1Q15788 1441 aa27.22■■□□□ 1.95
SNF8-205ENST00000507302 SAMD9LQ8IVG5 1584 aa27.21■■□□□ 1.95
SNF8-205ENST00000507302 NPATQ14207 1427 aa27.19■■□□□ 1.94
SNF8-205ENST00000507302 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
SNF8-205ENST00000507302 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
SNF8-205ENST00000507302 ILDR2Q71H61 639 aa27.15■■□□□ 1.94
SNF8-205ENST00000507302 FYCO1Q9BQS8 1478 aa27.14■■□□□ 1.94
SNF8-205ENST00000507302 DISP3Q9P2K9 1392 aa27.14■■□□□ 1.94
SNF8-205ENST00000507302 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
SNF8-205ENST00000507302 ESF1Q9H501 851 aaKnown RBP27.12■■□□□ 1.93
SNF8-205ENST00000507302 PLXNC1O60486 1568 aa27.12■■□□□ 1.93
SNF8-205ENST00000507302 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
SNF8-205ENST00000507302 CAMSAP1Q5T5Y3 1602 aa27.1■■□□□ 1.93
SNF8-205ENST00000507302 SYCP2Q9BX26 1530 aa27.1■■□□□ 1.93
SNF8-205ENST00000507302 ZNF142P52746 1687 aaPredicted RBP27.09■■□□□ 1.93
SNF8-205ENST00000507302 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
SNF8-205ENST00000507302 KIAA1107Q9UPP5 1409 aa27.08■■□□□ 1.93
SNF8-205ENST00000507302 SOCS7O14512 581 aa27.08■■□□□ 1.93
SNF8-205ENST00000507302 ZMYM3Q14202 1370 aa27.08■■□□□ 1.93
SNF8-205ENST00000507302 SPATA31D1Q6ZQQ2 1576 aa27.07■■□□□ 1.92
SNF8-205ENST00000507302 SUPT6HQ7KZ85 1726 aaKnown RBP27.06■■□□□ 1.92
SNF8-205ENST00000507302 ATP7AQ04656 1500 aa27.06■■□□□ 1.92
SNF8-205ENST00000507302 CLTCQ00610 1675 aaKnown RBP27.03■■□□□ 1.92
SNF8-205ENST00000507302 PLA2R1Q13018 1463 aa27.03■■□□□ 1.92
SNF8-205ENST00000507302 MYO3AQ8NEV4 1616 aa27.02■■□□□ 1.92
SNF8-205ENST00000507302 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
SNF8-205ENST00000507302 SPAG9O60271 1321 aaKnown RBP27.02■■□□□ 1.92
SNF8-205ENST00000507302 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
SNF8-205ENST00000507302 A2MP01023 1474 aa27■■□□□ 1.91
SNF8-205ENST00000507302 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
SNF8-205ENST00000507302 HNRNPMP52272 730 aaKnown RBP eCLIP26.98■■□□□ 1.91
SNF8-205ENST00000507302 CEP170BQ9Y4F5 1589 aaPredicted RBP26.97■■□□□ 1.91
SNF8-205ENST00000507302 ADGBQ8N7X0 1667 aa26.96■■□□□ 1.91
SNF8-205ENST00000507302 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
SNF8-205ENST00000507302 PKD2Q13563 968 aa26.94■■□□□ 1.9
SNF8-205ENST00000507302 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
SNF8-205ENST00000507302 NCKAP5LQ9HCH0 1330 aa26.92■■□□□ 1.9
SNF8-205ENST00000507302 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
SNF8-205ENST00000507302 CFDP1Q9UEE9 299 aaPredicted RBP26.9■■□□□ 1.9
SNF8-205ENST00000507302 MBD5Q9P267 1494 aa26.88■■□□□ 1.89
SNF8-205ENST00000507302 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
SNF8-205ENST00000507302 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
SNF8-205ENST00000507302 RTEL1-TNFRSF6BF6WH68 1400 aa26.85■■□□□ 1.89
SNF8-205ENST00000507302 DNMT1P26358 1616 aaKnown RBP26.85■■□□□ 1.89
SNF8-205ENST00000507302 A2ML1A8K2U0 1454 aa26.84■■□□□ 1.89
SNF8-205ENST00000507302 GGT6Q6P531 493 aa26.81■■□□□ 1.88
SNF8-205ENST00000507302 FAM135AQ9P2D6 1515 aa26.8■■□□□ 1.88
SNF8-205ENST00000507302 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
SNF8-205ENST00000507302 UBAP1LF5GYI3 381 aa26.78■■□□□ 1.88
SNF8-205ENST00000507302 DHX29Q7Z478 1369 aaKnown RBP26.78■■□□□ 1.88
SNF8-205ENST00000507302 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
SNF8-205ENST00000507302 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
SNF8-205ENST00000507302 POLR1AO95602 1720 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms