RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
COPS4-204ENST00000506443 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
COPS4-204ENST00000506443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
COPS4-204ENST00000506443 MLECQ14165 292 aa15.43■□□□□ 0.06
COPS4-204ENST00000506443 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
COPS4-204ENST00000506443 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
COPS4-204ENST00000506443 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
COPS4-204ENST00000506443 PREX1Q8TCU6 1659 aa15.42■□□□□ 0.06
COPS4-204ENST00000506443 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
COPS4-204ENST00000506443 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
COPS4-204ENST00000506443 EFCAB5A4FU69 1503 aa15.41■□□□□ 0.06
COPS4-204ENST00000506443 SPATA31D1Q6ZQQ2 1576 aa15.41■□□□□ 0.06
COPS4-204ENST00000506443 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.05
COPS4-204ENST00000506443 POGZQ7Z3K3 1410 aa15.37■□□□□ 0.05
COPS4-204ENST00000506443 CEBPAP49715 358 aaPredicted RBP15.36■□□□□ 0.05
COPS4-204ENST00000506443 KIF14Q15058 1648 aa15.35■□□□□ 0.05
COPS4-204ENST00000506443 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
COPS4-204ENST00000506443 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
COPS4-204ENST00000506443 SOCS7O14512 581 aa15.3■□□□□ 0.04
COPS4-204ENST00000506443 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
COPS4-204ENST00000506443 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
COPS4-204ENST00000506443 C3P01024 1663 aa15.29■□□□□ 0.04
COPS4-204ENST00000506443 C9orf84Q5VXU9 1444 aa15.29■□□□□ 0.04
COPS4-204ENST00000506443 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
COPS4-204ENST00000506443 LRRIQ1Q96JM4 1722 aa15.28■□□□□ 0.04
COPS4-204ENST00000506443 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
COPS4-204ENST00000506443 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.04
COPS4-204ENST00000506443 ATP10AO60312 1499 aa15.27■□□□□ 0.03
COPS4-204ENST00000506443 KDM5CP41229 1560 aa15.25■□□□□ 0.03
COPS4-204ENST00000506443 PLEKHD1A6NEE1 506 aa15.25■□□□□ 0.03
COPS4-204ENST00000506443 PLCH2O75038 1416 aa15.25■□□□□ 0.03
COPS4-204ENST00000506443 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
COPS4-204ENST00000506443 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
COPS4-204ENST00000506443 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
COPS4-204ENST00000506443 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
COPS4-204ENST00000506443 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
COPS4-204ENST00000506443 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
COPS4-204ENST00000506443 ITSN2Q9NZM3 1697 aa15.17■□□□□ 0.02
COPS4-204ENST00000506443 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
COPS4-204ENST00000506443 REREQ9P2R6 1566 aa15.16■□□□□ 0.02
COPS4-204ENST00000506443 PTPRTO14522 1441 aa15.16■□□□□ 0.02
COPS4-204ENST00000506443 NCOA1Q15788 1441 aa15.16■□□□□ 0.02
COPS4-204ENST00000506443 ABCC1P33527 1531 aa15.15■□□□□ 0.02
COPS4-204ENST00000506443 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
COPS4-204ENST00000506443 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
COPS4-204ENST00000506443 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
COPS4-204ENST00000506443 SETD1BQ9UPS6 1966 aaKnown RBP15.14■□□□□ 0.01
COPS4-204ENST00000506443 CAMSAP1Q5T5Y3 1602 aa15.14■□□□□ 0.01
COPS4-204ENST00000506443 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
COPS4-204ENST00000506443 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
COPS4-204ENST00000506443 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
COPS4-204ENST00000506443 MYO3AQ8NEV4 1616 aa15.1■□□□□ 0.01
COPS4-204ENST00000506443 TROQ12816 1431 aaPredicted RBP15.1■□□□□ 0.01
COPS4-204ENST00000506443 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
COPS4-204ENST00000506443 AGLP35573 1532 aa15.09■□□□□ 0.01
COPS4-204ENST00000506443 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
COPS4-204ENST00000506443 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
COPS4-204ENST00000506443 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0
COPS4-204ENST00000506443 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
COPS4-204ENST00000506443 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
COPS4-204ENST00000506443 ZNF142P52746 1687 aaPredicted RBP15.07■□□□□ 0
COPS4-204ENST00000506443 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
COPS4-204ENST00000506443 IQSEC2Q5JU85 1478 aa15.07■□□□□ 0
COPS4-204ENST00000506443 EEA1Q15075 1411 aa15.06■□□□□ 0
COPS4-204ENST00000506443 MROH2AA6NES4 1674 aa15.06■□□□□ 0
COPS4-204ENST00000506443 NCKAP5LQ9HCH0 1330 aa15.05■□□□□ -0
COPS4-204ENST00000506443 MED1Q15648 1581 aaPredicted RBP15.05■□□□□ -0
COPS4-204ENST00000506443 SAMD9LQ8IVG5 1584 aa15.05■□□□□ -0
COPS4-204ENST00000506443 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
COPS4-204ENST00000506443 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
COPS4-204ENST00000506443 FMN1Q68DA7 1419 aa15.02■□□□□ -0
COPS4-204ENST00000506443 PLXNC1O60486 1568 aa15□□□□□ -0.01
COPS4-204ENST00000506443 CLIP1P30622 1438 aa15□□□□□ -0.01
COPS4-204ENST00000506443 INO80Q9ULG1 1556 aaPredicted RBP14.99□□□□□ -0.01
COPS4-204ENST00000506443 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
COPS4-204ENST00000506443 UBAP1LF5GYI3 381 aa14.99□□□□□ -0.01
COPS4-204ENST00000506443 TCOF1Q13428 1488 aaKnown RBP14.99□□□□□ -0.01
COPS4-204ENST00000506443 NEURL4Q96JN8 1562 aa14.98□□□□□ -0.01
COPS4-204ENST00000506443 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
COPS4-204ENST00000506443 NPATQ14207 1427 aa14.97□□□□□ -0.01
COPS4-204ENST00000506443 CNTLNQ9NXG0 1405 aa14.97□□□□□ -0.01
COPS4-204ENST00000506443 ATP7AQ04656 1500 aa14.97□□□□□ -0.01
COPS4-204ENST00000506443 PTPRKQ15262 1439 aa14.96□□□□□ -0.01
COPS4-204ENST00000506443 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
COPS4-204ENST00000506443 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
COPS4-204ENST00000506443 POLR1AO95602 1720 aaPredicted RBP14.95□□□□□ -0.02
COPS4-204ENST00000506443 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
COPS4-204ENST00000506443 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
COPS4-204ENST00000506443 HSPA1LP34931 641 aa14.93□□□□□ -0.02
COPS4-204ENST00000506443 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
COPS4-204ENST00000506443 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
COPS4-204ENST00000506443 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
COPS4-204ENST00000506443 CDK11AQ9UQ88 783 aaPredicted RBP14.91□□□□□ -0.02
COPS4-204ENST00000506443 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
COPS4-204ENST00000506443 PIP4K2BP78356 416 aa14.89□□□□□ -0.03
COPS4-204ENST00000506443 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
COPS4-204ENST00000506443 ADGBQ8N7X0 1667 aa14.89□□□□□ -0.03
COPS4-204ENST00000506443 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
COPS4-204ENST00000506443 A2MP01023 1474 aa14.89□□□□□ -0.03
COPS4-204ENST00000506443 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms