RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 ATP10BO94823 1461 aa14.14□□□□□ -0.15
RACK1-213ENST00000506312 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
RACK1-213ENST00000506312 FHOD3Q2V2M9 1422 aa14.13□□□□□ -0.15
RACK1-213ENST00000506312 GOLGA3Q08378 1498 aa14.11□□□□□ -0.15
RACK1-213ENST00000506312 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
RACK1-213ENST00000506312 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
RACK1-213ENST00000506312 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
RACK1-213ENST00000506312 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
RACK1-213ENST00000506312 HECW1Q76N89 1606 aa14.08□□□□□ -0.15
RACK1-213ENST00000506312 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
RACK1-213ENST00000506312 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
RACK1-213ENST00000506312 C9orf84Q5VXU9 1444 aa14.04□□□□□ -0.16
RACK1-213ENST00000506312 ATP10AO60312 1499 aa14.04□□□□□ -0.16
RACK1-213ENST00000506312 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
RACK1-213ENST00000506312 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
RACK1-213ENST00000506312 CTTNBP2Q8WZ74 1663 aa14.02□□□□□ -0.16
RACK1-213ENST00000506312 CFAP74Q9C0B2 1584 aa14.02□□□□□ -0.16
RACK1-213ENST00000506312 SETD1BQ9UPS6 1966 aaKnown RBP14.01□□□□□ -0.17
RACK1-213ENST00000506312 C3P01024 1663 aa14.01□□□□□ -0.17
RACK1-213ENST00000506312 TOM1O60784 492 aa14□□□□□ -0.17
RACK1-213ENST00000506312 ESF1Q9H501 851 aaKnown RBP14□□□□□ -0.17
RACK1-213ENST00000506312 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
RACK1-213ENST00000506312 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
RACK1-213ENST00000506312 RGS17Q9UGC6 210 aaPredicted RBP13.98□□□□□ -0.17
RACK1-213ENST00000506312 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
RACK1-213ENST00000506312 RAPGEF6Q8TEU7 1601 aa13.94□□□□□ -0.18
RACK1-213ENST00000506312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.181e-34■■□□□ 13
RACK1-213ENST00000506312 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
RACK1-213ENST00000506312 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
RACK1-213ENST00000506312 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
RACK1-213ENST00000506312 POTEAQ6S8J7 498 aa13.9□□□□□ -0.18
RACK1-213ENST00000506312 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
RACK1-213ENST00000506312 PKD2Q13563 968 aa13.88□□□□□ -0.19
RACK1-213ENST00000506312 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
RACK1-213ENST00000506312 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
RACK1-213ENST00000506312 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
RACK1-213ENST00000506312 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
RACK1-213ENST00000506312 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
RACK1-213ENST00000506312 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
RACK1-213ENST00000506312 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
RACK1-213ENST00000506312 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
RACK1-213ENST00000506312 CPS1P31327 1500 aa13.83□□□□□ -0.2
RACK1-213ENST00000506312 NPATQ14207 1427 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 MYO3AQ8NEV4 1616 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 PLCH2O75038 1416 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
RACK1-213ENST00000506312 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
RACK1-213ENST00000506312 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
RACK1-213ENST00000506312 AGLP35573 1532 aa13.78□□□□□ -0.2
RACK1-213ENST00000506312 ZNF142P52746 1687 aaPredicted RBP13.77□□□□□ -0.21
RACK1-213ENST00000506312 ZMYM3Q14202 1370 aa13.77□□□□□ -0.21
RACK1-213ENST00000506312 KDM5CP41229 1560 aa13.76□□□□□ -0.21
RACK1-213ENST00000506312 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
RACK1-213ENST00000506312 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
RACK1-213ENST00000506312 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
RACK1-213ENST00000506312 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
RACK1-213ENST00000506312 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
RACK1-213ENST00000506312 ARHGAP5Q13017 1502 aa13.73□□□□□ -0.21
RACK1-213ENST00000506312 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
RACK1-213ENST00000506312 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
RACK1-213ENST00000506312 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.22
RACK1-213ENST00000506312 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
RACK1-213ENST00000506312 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
RACK1-213ENST00000506312 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
RACK1-213ENST00000506312 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
RACK1-213ENST00000506312 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
RACK1-213ENST00000506312 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
RACK1-213ENST00000506312 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
RACK1-213ENST00000506312 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
RACK1-213ENST00000506312 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
RACK1-213ENST00000506312 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
RACK1-213ENST00000506312 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
RACK1-213ENST00000506312 KIF14Q15058 1648 aa13.65□□□□□ -0.22
RACK1-213ENST00000506312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
RACK1-213ENST00000506312 GGT6Q6P531 493 aa13.62□□□□□ -0.23
RACK1-213ENST00000506312 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
RACK1-213ENST00000506312 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
RACK1-213ENST00000506312 KIDINS220Q9ULH0 1771 aa13.61□□□□□ -0.23
RACK1-213ENST00000506312 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
RACK1-213ENST00000506312 ABCC1P33527 1531 aa13.58□□□□□ -0.24
RACK1-213ENST00000506312 SYNMO15061 1565 aa13.58□□□□□ -0.24
RACK1-213ENST00000506312 ITSN2Q9NZM3 1697 aa13.57□□□□□ -0.24
RACK1-213ENST00000506312 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
RACK1-213ENST00000506312 TNRQ92752 1358 aa13.56□□□□□ -0.24
RACK1-213ENST00000506312 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
RACK1-213ENST00000506312 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
RACK1-213ENST00000506312 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
RACK1-213ENST00000506312 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
RACK1-213ENST00000506312 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
RACK1-213ENST00000506312 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
RACK1-213ENST00000506312 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
RACK1-213ENST00000506312 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
RACK1-213ENST00000506312 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
RACK1-213ENST00000506312 MED14O60244 1454 aa13.5□□□□□ -0.25
RACK1-213ENST00000506312 CLIP1P30622 1438 aa13.5□□□□□ -0.25
RACK1-213ENST00000506312 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
RACK1-213ENST00000506312 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms