RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
SNF8-204ENST00000506104 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
SNF8-204ENST00000506104 HECW1Q76N89 1606 aa13.63□□□□□ -0.23
SNF8-204ENST00000506104 SCAPERQ9BY12 1400 aa13.63□□□□□ -0.23
SNF8-204ENST00000506104 SIGLEC1Q9BZZ2 1709 aa13.62□□□□□ -0.23
SNF8-204ENST00000506104 CDK11AQ9UQ88 783 aaPredicted RBP13.6□□□□□ -0.23
SNF8-204ENST00000506104 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
SNF8-204ENST00000506104 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
SNF8-204ENST00000506104 KIF14Q15058 1648 aa13.58□□□□□ -0.24
SNF8-204ENST00000506104 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
SNF8-204ENST00000506104 PLCH2O75038 1416 aa13.57□□□□□ -0.24
SNF8-204ENST00000506104 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
SNF8-204ENST00000506104 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
SNF8-204ENST00000506104 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
SNF8-204ENST00000506104 CLIP1P30622 1438 aa13.55□□□□□ -0.24
SNF8-204ENST00000506104 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
SNF8-204ENST00000506104 ATP10AO60312 1499 aa13.55□□□□□ -0.24
SNF8-204ENST00000506104 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
SNF8-204ENST00000506104 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
SNF8-204ENST00000506104 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
SNF8-204ENST00000506104 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
SNF8-204ENST00000506104 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
SNF8-204ENST00000506104 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
SNF8-204ENST00000506104 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
SNF8-204ENST00000506104 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
SNF8-204ENST00000506104 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
SNF8-204ENST00000506104 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
SNF8-204ENST00000506104 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
SNF8-204ENST00000506104 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
SNF8-204ENST00000506104 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.25
SNF8-204ENST00000506104 UHRF1BP1Q6BDS2 1440 aa13.46□□□□□ -0.26
SNF8-204ENST00000506104 ABCA6Q8N139 1617 aa13.46□□□□□ -0.26
SNF8-204ENST00000506104 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
SNF8-204ENST00000506104 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
SNF8-204ENST00000506104 C3P01024 1663 aa13.44□□□□□ -0.26
SNF8-204ENST00000506104 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
SNF8-204ENST00000506104 KDM5CP41229 1560 aa13.43□□□□□ -0.26
SNF8-204ENST00000506104 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
SNF8-204ENST00000506104 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
SNF8-204ENST00000506104 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
SNF8-204ENST00000506104 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
SNF8-204ENST00000506104 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
SNF8-204ENST00000506104 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
SNF8-204ENST00000506104 ABCC1P33527 1531 aa13.4□□□□□ -0.26
SNF8-204ENST00000506104 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
SNF8-204ENST00000506104 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
SNF8-204ENST00000506104 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
SNF8-204ENST00000506104 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNF8-204ENST00000506104 MLH3Q9UHC1 1453 aa13.37□□□□□ -0.27
SNF8-204ENST00000506104 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
SNF8-204ENST00000506104 SPAG9O60271 1321 aaKnown RBP13.36□□□□□ -0.27
SNF8-204ENST00000506104 REREQ9P2R6 1566 aa13.35□□□□□ -0.27
SNF8-204ENST00000506104 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
SNF8-204ENST00000506104 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
SNF8-204ENST00000506104 FYCO1Q9BQS8 1478 aa13.34□□□□□ -0.27
SNF8-204ENST00000506104 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
SNF8-204ENST00000506104 GGT6Q6P531 493 aa13.33□□□□□ -0.28
SNF8-204ENST00000506104 AGLP35573 1532 aa13.33□□□□□ -0.28
SNF8-204ENST00000506104 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
SNF8-204ENST00000506104 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
SNF8-204ENST00000506104 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
SNF8-204ENST00000506104 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
SNF8-204ENST00000506104 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
SNF8-204ENST00000506104 ATP7AQ04656 1500 aa13.3□□□□□ -0.28
SNF8-204ENST00000506104 PTPRTO14522 1441 aa13.3□□□□□ -0.28
SNF8-204ENST00000506104 MROH2AA6NES4 1674 aa13.29□□□□□ -0.28
SNF8-204ENST00000506104 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
SNF8-204ENST00000506104 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
SNF8-204ENST00000506104 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
SNF8-204ENST00000506104 NCOA1Q15788 1441 aa13.27□□□□□ -0.29
SNF8-204ENST00000506104 A2MP01023 1474 aa13.27□□□□□ -0.29
SNF8-204ENST00000506104 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.29
SNF8-204ENST00000506104 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
SNF8-204ENST00000506104 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
SNF8-204ENST00000506104 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
SNF8-204ENST00000506104 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
SNF8-204ENST00000506104 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
SNF8-204ENST00000506104 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
SNF8-204ENST00000506104 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
SNF8-204ENST00000506104 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
SNF8-204ENST00000506104 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
SNF8-204ENST00000506104 NPATQ14207 1427 aa13.23□□□□□ -0.29
SNF8-204ENST00000506104 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
SNF8-204ENST00000506104 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
SNF8-204ENST00000506104 ZNF142P52746 1687 aaPredicted RBP13.21□□□□□ -0.3
SNF8-204ENST00000506104 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.3
SNF8-204ENST00000506104 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
SNF8-204ENST00000506104 KIF3BO15066 747 aa13.2□□□□□ -0.3
SNF8-204ENST00000506104 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 SOCS7O14512 581 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 PKD2Q13563 968 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
SNF8-204ENST00000506104 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
SNF8-204ENST00000506104 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
SNF8-204ENST00000506104 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
SNF8-204ENST00000506104 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
SNF8-204ENST00000506104 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
SNF8-204ENST00000506104 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms