RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
NR1I3-221ENST00000505944 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
NR1I3-221ENST00000505944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-221ENST00000505944 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
NR1I3-221ENST00000505944 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
NR1I3-221ENST00000505944 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
NR1I3-221ENST00000505944 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
NR1I3-221ENST00000505944 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
NR1I3-221ENST00000505944 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
NR1I3-221ENST00000505944 SIGLEC1Q9BZZ2 1709 aa11.26□□□□□ -0.61
NR1I3-221ENST00000505944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
NR1I3-221ENST00000505944 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
NR1I3-221ENST00000505944 EEA1Q15075 1411 aa11.26□□□□□ -0.61
NR1I3-221ENST00000505944 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
NR1I3-221ENST00000505944 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
NR1I3-221ENST00000505944 HSPA2P54652 639 aa11.24□□□□□ -0.61
NR1I3-221ENST00000505944 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
NR1I3-221ENST00000505944 SOCS7O14512 581 aa11.23□□□□□ -0.61
NR1I3-221ENST00000505944 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
NR1I3-221ENST00000505944 ATP10AO60312 1499 aa11.23□□□□□ -0.61
NR1I3-221ENST00000505944 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
NR1I3-221ENST00000505944 PLCH2O75038 1416 aa11.22□□□□□ -0.61
NR1I3-221ENST00000505944 HECW1Q76N89 1606 aa11.22□□□□□ -0.61
NR1I3-221ENST00000505944 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-221ENST00000505944 MYO5CQ9NQX4 1742 aa11.21□□□□□ -0.62
NR1I3-221ENST00000505944 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
NR1I3-221ENST00000505944 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
NR1I3-221ENST00000505944 SCAPERQ9BY12 1400 aa11.2□□□□□ -0.62
NR1I3-221ENST00000505944 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
NR1I3-221ENST00000505944 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-221ENST00000505944 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-221ENST00000505944 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
NR1I3-221ENST00000505944 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
NR1I3-221ENST00000505944 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
NR1I3-221ENST00000505944 PTPRTO14522 1441 aa11.18□□□□□ -0.62
NR1I3-221ENST00000505944 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
NR1I3-221ENST00000505944 MLECQ14165 292 aa11.16□□□□□ -0.62
NR1I3-221ENST00000505944 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
NR1I3-221ENST00000505944 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-221ENST00000505944 KDM5CP41229 1560 aa11.15□□□□□ -0.62
NR1I3-221ENST00000505944 KIF14Q15058 1648 aa11.14□□□□□ -0.63
NR1I3-221ENST00000505944 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
NR1I3-221ENST00000505944 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
NR1I3-221ENST00000505944 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
NR1I3-221ENST00000505944 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
NR1I3-221ENST00000505944 CLIP1P30622 1438 aa11.13□□□□□ -0.63
NR1I3-221ENST00000505944 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
NR1I3-221ENST00000505944 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
NR1I3-221ENST00000505944 AGLP35573 1532 aa11.12□□□□□ -0.63
NR1I3-221ENST00000505944 MLH3Q9UHC1 1453 aa11.12□□□□□ -0.63
NR1I3-221ENST00000505944 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
NR1I3-221ENST00000505944 UBTFP17480 764 aaKnown RBP11.11□□□□□ -0.63
NR1I3-221ENST00000505944 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
NR1I3-221ENST00000505944 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-221ENST00000505944 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 CDC42BPBQ9Y5S2 1711 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 ARHGAP35Q9NRY4 1499 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 ABCA6Q8N139 1617 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 NPATQ14207 1427 aa11.09□□□□□ -0.63
NR1I3-221ENST00000505944 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-221ENST00000505944 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
NR1I3-221ENST00000505944 C3P01024 1663 aa11.08□□□□□ -0.64
NR1I3-221ENST00000505944 PREX2Q70Z35 1606 aa11.07□□□□□ -0.64
NR1I3-221ENST00000505944 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
NR1I3-221ENST00000505944 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
NR1I3-221ENST00000505944 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
NR1I3-221ENST00000505944 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-221ENST00000505944 MROH2AA6NES4 1674 aa11.05□□□□□ -0.64
NR1I3-221ENST00000505944 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
NR1I3-221ENST00000505944 ABCC1P33527 1531 aa11.04□□□□□ -0.64
NR1I3-221ENST00000505944 CDC42BPAQ5VT25 1732 aa11.04□□□□□ -0.64
NR1I3-221ENST00000505944 PKD2Q13563 968 aa11.03□□□□□ -0.64
NR1I3-221ENST00000505944 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
NR1I3-221ENST00000505944 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
NR1I3-221ENST00000505944 PLA2R1Q13018 1463 aa11.02□□□□□ -0.65
NR1I3-221ENST00000505944 CCDC18Q5T9S5 1454 aa11.02□□□□□ -0.65
NR1I3-221ENST00000505944 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
NR1I3-221ENST00000505944 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
NR1I3-221ENST00000505944 DCAF8L1A6NGE4 600 aa10.98□□□□□ -0.65
NR1I3-221ENST00000505944 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
NR1I3-221ENST00000505944 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
NR1I3-221ENST00000505944 CASKIN1Q8WXD9 1431 aa10.97□□□□□ -0.65
NR1I3-221ENST00000505944 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
NR1I3-221ENST00000505944 SAMD9LQ8IVG5 1584 aa10.97□□□□□ -0.65
NR1I3-221ENST00000505944 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.65
NR1I3-221ENST00000505944 TCOF1Q13428 1488 aaKnown RBP10.96□□□□□ -0.65
NR1I3-221ENST00000505944 SYCP2Q9BX26 1530 aa10.95□□□□□ -0.66
NR1I3-221ENST00000505944 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
NR1I3-221ENST00000505944 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
NR1I3-221ENST00000505944 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
NR1I3-221ENST00000505944 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-221ENST00000505944 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
NR1I3-221ENST00000505944 SPAG9O60271 1321 aaKnown RBP10.94□□□□□ -0.66
NR1I3-221ENST00000505944 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-221ENST00000505944 CPS1P31327 1500 aa10.94□□□□□ -0.66
NR1I3-221ENST00000505944 CEP162Q5TB80 1403 aa10.93□□□□□ -0.66
NR1I3-221ENST00000505944 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
NR1I3-221ENST00000505944 ATP7AQ04656 1500 aa10.93□□□□□ -0.66
NR1I3-221ENST00000505944 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms