RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
SH3D21-205ENST00000505871 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
SH3D21-205ENST00000505871 ZNF644Q9H582 1327 aaPredicted RBP20.93■□□□□ 0.94
SH3D21-205ENST00000505871 RRP7BPQ9NSQ0 103 aa20.93■□□□□ 0.94
SH3D21-205ENST00000505871 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.94
SH3D21-205ENST00000505871 UHRF1BP1LA0JNW5 1464 aa20.89■□□□□ 0.93
SH3D21-205ENST00000505871 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
SH3D21-205ENST00000505871 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
SH3D21-205ENST00000505871 CROCC2H7BZ55 1655 aa20.86■□□□□ 0.93
SH3D21-205ENST00000505871 ADGBQ8N7X0 1667 aa20.85■□□□□ 0.93
SH3D21-205ENST00000505871 KDM6BO15054 1643 aa20.85■□□□□ 0.93
SH3D21-205ENST00000505871 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
SH3D21-205ENST00000505871 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.93
SH3D21-205ENST00000505871 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
SH3D21-205ENST00000505871 PREX2Q70Z35 1606 aa20.82■□□□□ 0.92
SH3D21-205ENST00000505871 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
SH3D21-205ENST00000505871 MYT1Q01538 1121 aa20.81■□□□□ 0.92
SH3D21-205ENST00000505871 ZCCHC11Q5TAX3 1644 aaKnown RBP20.8■□□□□ 0.92
SH3D21-205ENST00000505871 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
SH3D21-205ENST00000505871 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
SH3D21-205ENST00000505871 NCOA1Q15788 1441 aa20.79■□□□□ 0.92
SH3D21-205ENST00000505871 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
SH3D21-205ENST00000505871 ARHGEF5Q12774 1597 aa20.77■□□□□ 0.92
SH3D21-205ENST00000505871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.92
SH3D21-205ENST00000505871 TRIM52Q96A61 297 aa20.77■□□□□ 0.91
SH3D21-205ENST00000505871 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
SH3D21-205ENST00000505871 ANKRD30AQ9BXX3 1397 aa20.75■□□□□ 0.91
SH3D21-205ENST00000505871 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
SH3D21-205ENST00000505871 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
SH3D21-205ENST00000505871 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
SH3D21-205ENST00000505871 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
SH3D21-205ENST00000505871 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
SH3D21-205ENST00000505871 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
SH3D21-205ENST00000505871 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
SH3D21-205ENST00000505871 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
SH3D21-205ENST00000505871 RSPH4AQ5TD94 716 aa20.7■□□□□ 0.9
SH3D21-205ENST00000505871 ARHGAP5Q13017 1502 aa20.7■□□□□ 0.9
SH3D21-205ENST00000505871 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
SH3D21-205ENST00000505871 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
SH3D21-205ENST00000505871 TSPY4P0CV99 314 aa20.68■□□□□ 0.9
SH3D21-205ENST00000505871 TSPY10P0CW01 314 aa20.68■□□□□ 0.9
SH3D21-205ENST00000505871 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
SH3D21-205ENST00000505871 HNRNPMP52272 730 aaKnown RBP eCLIP20.66■□□□□ 0.9
SH3D21-205ENST00000505871 ANKRD50Q9ULJ7 1429 aa20.65■□□□□ 0.9
SH3D21-205ENST00000505871 PLCH2O75038 1416 aa20.64■□□□□ 0.89
SH3D21-205ENST00000505871 KIAA1107Q9UPP5 1409 aa20.64■□□□□ 0.89
SH3D21-205ENST00000505871 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
SH3D21-205ENST00000505871 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
SH3D21-205ENST00000505871 MAST1Q9Y2H9 1570 aa20.62■□□□□ 0.89
SH3D21-205ENST00000505871 PZPP20742 1482 aa20.62■□□□□ 0.89
SH3D21-205ENST00000505871 WDR7Q9Y4E6 1490 aa20.61■□□□□ 0.89
SH3D21-205ENST00000505871 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
SH3D21-205ENST00000505871 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
SH3D21-205ENST00000505871 ANKRD30BQ9BXX2 1392 aa20.6■□□□□ 0.89
SH3D21-205ENST00000505871 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
SH3D21-205ENST00000505871 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
SH3D21-205ENST00000505871 KDM5DQ9BY66 1539 aa20.56■□□□□ 0.88
SH3D21-205ENST00000505871 RPRD2Q5VT52 1461 aaKnown RBP20.54■□□□□ 0.88
SH3D21-205ENST00000505871 ABCC1P33527 1531 aa20.54■□□□□ 0.88
SH3D21-205ENST00000505871 FOXD1Q16676 465 aa20.54■□□□□ 0.88
SH3D21-205ENST00000505871 PLXNC1O60486 1568 aa20.54■□□□□ 0.88
SH3D21-205ENST00000505871 ARHGEF12Q9NZN5 1544 aa20.52■□□□□ 0.88
SH3D21-205ENST00000505871 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.88
SH3D21-205ENST00000505871 ASXL2Q76L83 1435 aa20.5■□□□□ 0.87
SH3D21-205ENST00000505871 NUP155O75694 1391 aa20.49■□□□□ 0.87
SH3D21-205ENST00000505871 MIER1Q8N108 512 aa20.48■□□□□ 0.87
SH3D21-205ENST00000505871 PKD2Q13563 968 aa20.46■□□□□ 0.87
SH3D21-205ENST00000505871 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
SH3D21-205ENST00000505871 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
SH3D21-205ENST00000505871 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.86
SH3D21-205ENST00000505871 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
SH3D21-205ENST00000505871 UNC13BO14795 1591 aa20.44■□□□□ 0.86
SH3D21-205ENST00000505871 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
SH3D21-205ENST00000505871 FANCAO15360 1455 aa20.42■□□□□ 0.86
SH3D21-205ENST00000505871 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
SH3D21-205ENST00000505871 RTEL1-TNFRSF6BF6WH68 1400 aa20.41■□□□□ 0.86
SH3D21-205ENST00000505871 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
SH3D21-205ENST00000505871 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
SH3D21-205ENST00000505871 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
SH3D21-205ENST00000505871 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
SH3D21-205ENST00000505871 IQGAP3Q86VI3 1631 aa20.35■□□□□ 0.85
SH3D21-205ENST00000505871 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
SH3D21-205ENST00000505871 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
SH3D21-205ENST00000505871 INO80Q9ULG1 1556 aaPredicted RBP20.33■□□□□ 0.84
SH3D21-205ENST00000505871 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
SH3D21-205ENST00000505871 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
SH3D21-205ENST00000505871 CFAP74Q9C0B2 1584 aa20.31■□□□□ 0.84
SH3D21-205ENST00000505871 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
SH3D21-205ENST00000505871 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
SH3D21-205ENST00000505871 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
SH3D21-205ENST00000505871 CD109Q6YHK3 1445 aa20.28■□□□□ 0.84
SH3D21-205ENST00000505871 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.84
SH3D21-205ENST00000505871 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
SH3D21-205ENST00000505871 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
SH3D21-205ENST00000505871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■□□□ 11.8
SH3D21-205ENST00000505871 HSPA5P11021 654 aaKnown RBP20.26■□□□□ 0.83
SH3D21-205ENST00000505871 ZNF518AQ6AHZ1 1483 aa20.23■□□□□ 0.83
SH3D21-205ENST00000505871 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
SH3D21-205ENST00000505871 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
SH3D21-205ENST00000505871 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms