RNA–Protein interactions for RNA: ENST00000505699.5

ABCC3-207, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 5,271 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-207ENST00000505699 GOLGA6L4A6NEF3 574 aa15.6■□□□□ 0.09
ABCC3-207ENST00000505699 DCAF11Q8TEB1 546 aa15.59■□□□□ 0.09
ABCC3-207ENST00000505699 SOX12O15370 315 aa15.59■□□□□ 0.09
ABCC3-207ENST00000505699 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
ABCC3-207ENST00000505699 CCNB3Q8WWL7 1395 aa15.58■□□□□ 0.08
ABCC3-207ENST00000505699 NAP1L5Q96NT1 182 aaPredicted RBP15.57■□□□□ 0.08
ABCC3-207ENST00000505699 KANK1Q14678 1352 aa15.56■□□□□ 0.08
ABCC3-207ENST00000505699 MLECQ14165 292 aa15.55■□□□□ 0.08
ABCC3-207ENST00000505699 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
ABCC3-207ENST00000505699 MORC1Q86VD1 984 aa15.55■□□□□ 0.08
ABCC3-207ENST00000505699 HSCBQ8IWL3 235 aa15.54■□□□□ 0.08
ABCC3-207ENST00000505699 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
ABCC3-207ENST00000505699 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
ABCC3-207ENST00000505699 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
ABCC3-207ENST00000505699 MCCP23508 829 aa15.53■□□□□ 0.08
ABCC3-207ENST00000505699 B4GALNT3Q6L9W6 998 aa15.53■□□□□ 0.08
ABCC3-207ENST00000505699 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
ABCC3-207ENST00000505699 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.08
ABCC3-207ENST00000505699 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
ABCC3-207ENST00000505699 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
ABCC3-207ENST00000505699 ISY1Q9ULR0 285 aaKnown RBP15.49■□□□□ 0.07
ABCC3-207ENST00000505699 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
ABCC3-207ENST00000505699 CLSTN1O94985 981 aa15.47■□□□□ 0.07
ABCC3-207ENST00000505699 CHAF1AQ13111 956 aaPredicted RBP15.47■□□□□ 0.07
ABCC3-207ENST00000505699 GGT6Q6P531 493 aa15.46■□□□□ 0.07
ABCC3-207ENST00000505699 RTN4Q9NQC3 1192 aaKnown RBP15.46■□□□□ 0.07
ABCC3-207ENST00000505699 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
ABCC3-207ENST00000505699 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.06
ABCC3-207ENST00000505699 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
ABCC3-207ENST00000505699 STK26Q9P289 416 aa15.45■□□□□ 0.06
ABCC3-207ENST00000505699 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
ABCC3-207ENST00000505699 KIAA1211Q6ZU35 1233 aa15.44■□□□□ 0.06
ABCC3-207ENST00000505699 CFTRP13569 1480 aa15.43■□□□□ 0.06
ABCC3-207ENST00000505699 APBB1O00213 710 aa15.43■□□□□ 0.06
ABCC3-207ENST00000505699 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
ABCC3-207ENST00000505699 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
ABCC3-207ENST00000505699 SPRYD3Q8NCJ5 442 aa15.41■□□□□ 0.06
ABCC3-207ENST00000505699 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
ABCC3-207ENST00000505699 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
ABCC3-207ENST00000505699 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
ABCC3-207ENST00000505699 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
ABCC3-207ENST00000505699 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
ABCC3-207ENST00000505699 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
ABCC3-207ENST00000505699 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
ABCC3-207ENST00000505699 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
ABCC3-207ENST00000505699 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.063e-7■■■□□ 17.5
ABCC3-207ENST00000505699 PKD2Q13563 968 aa15.4■□□□□ 0.06
ABCC3-207ENST00000505699 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
ABCC3-207ENST00000505699 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
ABCC3-207ENST00000505699 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
ABCC3-207ENST00000505699 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
ABCC3-207ENST00000505699 GAPVD1Q14C86 1478 aa15.39■□□□□ 0.05
ABCC3-207ENST00000505699 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
ABCC3-207ENST00000505699 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
ABCC3-207ENST00000505699 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
ABCC3-207ENST00000505699 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
ABCC3-207ENST00000505699 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
ABCC3-207ENST00000505699 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
ABCC3-207ENST00000505699 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
ABCC3-207ENST00000505699 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
ABCC3-207ENST00000505699 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
ABCC3-207ENST00000505699 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
ABCC3-207ENST00000505699 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
ABCC3-207ENST00000505699 GBP4Q96PP9 640 aa15.33■□□□□ 0.04
ABCC3-207ENST00000505699 STK31Q9BXU1 1019 aa15.33■□□□□ 0.04
ABCC3-207ENST00000505699 HTATSF1O43719 755 aaKnown RBP15.32■□□□□ 0.04
ABCC3-207ENST00000505699 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
ABCC3-207ENST00000505699 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
ABCC3-207ENST00000505699 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
ABCC3-207ENST00000505699 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
ABCC3-207ENST00000505699 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
ABCC3-207ENST00000505699 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
ABCC3-207ENST00000505699 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
ABCC3-207ENST00000505699 FOXD1Q16676 465 aa15.3■□□□□ 0.04
ABCC3-207ENST00000505699 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
ABCC3-207ENST00000505699 RALBP1Q15311 655 aa15.3■□□□□ 0.04
ABCC3-207ENST00000505699 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
ABCC3-207ENST00000505699 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
ABCC3-207ENST00000505699 PTMSP20962 102 aa15.29■□□□□ 0.04
ABCC3-207ENST00000505699 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
ABCC3-207ENST00000505699 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
ABCC3-207ENST00000505699 CHMP3Q9Y3E7 222 aa15.28■□□□□ 0.04
ABCC3-207ENST00000505699 NUP155O75694 1391 aa15.27■□□□□ 0.04
ABCC3-207ENST00000505699 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.03
ABCC3-207ENST00000505699 HMMRO75330 724 aa15.26■□□□□ 0.03
ABCC3-207ENST00000505699 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
ABCC3-207ENST00000505699 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
ABCC3-207ENST00000505699 PTPRGP23470 1445 aa15.26■□□□□ 0.03
ABCC3-207ENST00000505699 SLKQ9H2G2 1235 aaPredicted RBP15.26■□□□□ 0.03
ABCC3-207ENST00000505699 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
ABCC3-207ENST00000505699 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
ABCC3-207ENST00000505699 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
ABCC3-207ENST00000505699 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
ABCC3-207ENST00000505699 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
ABCC3-207ENST00000505699 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
ABCC3-207ENST00000505699 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
ABCC3-207ENST00000505699 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
ABCC3-207ENST00000505699 TRIM6-TRIM34B2RNG4 842 aa15.23■□□□□ 0.03
ABCC3-207ENST00000505699 GZF1Q9H116 711 aaPredicted RBP15.23■□□□□ 0.03
ABCC3-207ENST00000505699 DEKP35659 375 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms