RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
TRAPPC11-204ENST00000505676 ADGRL2O95490 1459 aa24.97■■□□□ 1.59
TRAPPC11-204ENST00000505676 ADGBQ8N7X0 1667 aa24.97■■□□□ 1.59
TRAPPC11-204ENST00000505676 CROCC2H7BZ55 1655 aa24.95■■□□□ 1.59
TRAPPC11-204ENST00000505676 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
TRAPPC11-204ENST00000505676 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
TRAPPC11-204ENST00000505676 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
TRAPPC11-204ENST00000505676 UHRF1BP1LA0JNW5 1464 aa24.94■■□□□ 1.58
TRAPPC11-204ENST00000505676 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
TRAPPC11-204ENST00000505676 TONSLQ96HA7 1378 aa24.88■■□□□ 1.57
TRAPPC11-204ENST00000505676 ARHGEF5Q12774 1597 aa24.88■■□□□ 1.57
TRAPPC11-204ENST00000505676 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
TRAPPC11-204ENST00000505676 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC11-204ENST00000505676 ANKRD30AQ9BXX3 1397 aa24.86■■□□□ 1.57
TRAPPC11-204ENST00000505676 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
TRAPPC11-204ENST00000505676 PREX2Q70Z35 1606 aa24.86■■□□□ 1.57
TRAPPC11-204ENST00000505676 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
TRAPPC11-204ENST00000505676 KDM6BO15054 1643 aa24.84■■□□□ 1.57
TRAPPC11-204ENST00000505676 RSPH4AQ5TD94 716 aa24.84■■□□□ 1.57
TRAPPC11-204ENST00000505676 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC11-204ENST00000505676 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.56
TRAPPC11-204ENST00000505676 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
TRAPPC11-204ENST00000505676 KDM5BQ9UGL1 1544 aa24.8■■□□□ 1.56
TRAPPC11-204ENST00000505676 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
TRAPPC11-204ENST00000505676 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
TRAPPC11-204ENST00000505676 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC11-204ENST00000505676 ZNF777Q9ULD5 760 aaPredicted RBP24.77■■□□□ 1.56
TRAPPC11-204ENST00000505676 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
TRAPPC11-204ENST00000505676 CDC42BPBQ9Y5S2 1711 aa24.74■■□□□ 1.55
TRAPPC11-204ENST00000505676 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
TRAPPC11-204ENST00000505676 ZCCHC11Q5TAX3 1644 aaKnown RBP24.73■■□□□ 1.55
TRAPPC11-204ENST00000505676 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
TRAPPC11-204ENST00000505676 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
TRAPPC11-204ENST00000505676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
TRAPPC11-204ENST00000505676 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
TRAPPC11-204ENST00000505676 SAMD9LQ8IVG5 1584 aa24.72■■□□□ 1.55
TRAPPC11-204ENST00000505676 MYO5CQ9NQX4 1742 aa24.71■■□□□ 1.55
TRAPPC11-204ENST00000505676 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
TRAPPC11-204ENST00000505676 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
TRAPPC11-204ENST00000505676 MAST1Q9Y2H9 1570 aa24.71■■□□□ 1.55
TRAPPC11-204ENST00000505676 TTC37Q6PGP7 1564 aa24.69■■□□□ 1.54
TRAPPC11-204ENST00000505676 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
TRAPPC11-204ENST00000505676 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC11-204ENST00000505676 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
TRAPPC11-204ENST00000505676 ARHGAP5Q13017 1502 aa24.67■■□□□ 1.54
TRAPPC11-204ENST00000505676 ARAP3Q8WWN8 1544 aa24.67■■□□□ 1.54
TRAPPC11-204ENST00000505676 PZPP20742 1482 aa24.66■■□□□ 1.54
TRAPPC11-204ENST00000505676 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
TRAPPC11-204ENST00000505676 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
TRAPPC11-204ENST00000505676 PLCH2O75038 1416 aa24.63■■□□□ 1.53
TRAPPC11-204ENST00000505676 MIER1Q8N108 512 aa24.63■■□□□ 1.53
TRAPPC11-204ENST00000505676 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
TRAPPC11-204ENST00000505676 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
TRAPPC11-204ENST00000505676 SYCP2Q9BX26 1530 aa24.58■■□□□ 1.53
TRAPPC11-204ENST00000505676 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAPPC11-204ENST00000505676 EFCAB2Q5VUJ9 269 aa24.54■■□□□ 1.52
TRAPPC11-204ENST00000505676 WDR7Q9Y4E6 1490 aa24.54■■□□□ 1.52
TRAPPC11-204ENST00000505676 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
TRAPPC11-204ENST00000505676 TEX14Q8IWB6 1497 aa24.52■■□□□ 1.52
TRAPPC11-204ENST00000505676 ABCC1P33527 1531 aa24.51■■□□□ 1.51
TRAPPC11-204ENST00000505676 NUP155O75694 1391 aa24.49■■□□□ 1.51
TRAPPC11-204ENST00000505676 DUOX2Q9NRD8 1548 aa24.48■■□□□ 1.51
TRAPPC11-204ENST00000505676 UNC13BO14795 1591 aa24.47■■□□□ 1.51
TRAPPC11-204ENST00000505676 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
TRAPPC11-204ENST00000505676 L3MBTL2Q969R5 705 aa24.46■■□□□ 1.51
TRAPPC11-204ENST00000505676 ERBINQ96RT1 1412 aa24.46■■□□□ 1.51
TRAPPC11-204ENST00000505676 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.51
TRAPPC11-204ENST00000505676 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
TRAPPC11-204ENST00000505676 PKD2Q13563 968 aa24.44■■□□□ 1.5
TRAPPC11-204ENST00000505676 FOXD1Q16676 465 aa24.43■■□□□ 1.5
TRAPPC11-204ENST00000505676 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
TRAPPC11-204ENST00000505676 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
TRAPPC11-204ENST00000505676 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
TRAPPC11-204ENST00000505676 MAGI2Q86UL8 1455 aa24.38■■□□□ 1.49
TRAPPC11-204ENST00000505676 IQGAP3Q86VI3 1631 aa24.36■■□□□ 1.49
TRAPPC11-204ENST00000505676 ASXL2Q76L83 1435 aa24.35■■□□□ 1.49
TRAPPC11-204ENST00000505676 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.49
TRAPPC11-204ENST00000505676 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
TRAPPC11-204ENST00000505676 FANCAO15360 1455 aa24.32■■□□□ 1.48
TRAPPC11-204ENST00000505676 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
TRAPPC11-204ENST00000505676 TRAPPC8Q9Y2L5 1435 aa24.3■■□□□ 1.48
TRAPPC11-204ENST00000505676 ZFYVE16Q7Z3T8 1539 aa24.29■■□□□ 1.48
TRAPPC11-204ENST00000505676 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
TRAPPC11-204ENST00000505676 HSPA5P11021 654 aaKnown RBP24.29■■□□□ 1.48
TRAPPC11-204ENST00000505676 SPAG9O60271 1321 aaKnown RBP24.28■■□□□ 1.48
TRAPPC11-204ENST00000505676 ATP10AO60312 1499 aa24.27■■□□□ 1.48
TRAPPC11-204ENST00000505676 INO80Q9ULG1 1556 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC11-204ENST00000505676 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
TRAPPC11-204ENST00000505676 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
TRAPPC11-204ENST00000505676 ANP32CO43423 234 aa24.23■■□□□ 1.47
TRAPPC11-204ENST00000505676 ADGRL1O94910 1474 aa24.23■■□□□ 1.47
TRAPPC11-204ENST00000505676 SPATA31E1Q6ZUB1 1445 aa24.23■■□□□ 1.47
TRAPPC11-204ENST00000505676 ATP7AQ04656 1500 aa24.22■■□□□ 1.47
TRAPPC11-204ENST00000505676 CCDC144AA2RUR9 1427 aa24.22■■□□□ 1.47
TRAPPC11-204ENST00000505676 RALGAPBQ86X10 1494 aa24.22■■□□□ 1.47
TRAPPC11-204ENST00000505676 YTHDC1Q96MU7 727 aaKnown RBP24.22■■□□□ 1.47
TRAPPC11-204ENST00000505676 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
TRAPPC11-204ENST00000505676 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
TRAPPC11-204ENST00000505676 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
TRAPPC11-204ENST00000505676 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms