RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 FER1L4A9Z1Z3 1794 aa28.13■■■□□ 2.09
DDR1-257ENST00000505534 MLECQ14165 292 aa28.11■■■□□ 2.09
DDR1-257ENST00000505534 MYO5CQ9NQX4 1742 aa28.09■■■□□ 2.09
DDR1-257ENST00000505534 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
DDR1-257ENST00000505534 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
DDR1-257ENST00000505534 ATP1B4Q9UN42 357 aaPredicted RBP28.07■■■□□ 2.08
DDR1-257ENST00000505534 CDK11AQ9UQ88 783 aaPredicted RBP28.07■■■□□ 2.08
DDR1-257ENST00000505534 ATP10AO60312 1499 aa28.07■■■□□ 2.08
DDR1-257ENST00000505534 UBTFP17480 764 aaKnown RBP28.05■■■□□ 2.08
DDR1-257ENST00000505534 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
DDR1-257ENST00000505534 C9orf84Q5VXU9 1444 aa28.02■■■□□ 2.08
DDR1-257ENST00000505534 ARHGAP35Q9NRY4 1499 aa27.99■■■□□ 2.07
DDR1-257ENST00000505534 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
DDR1-257ENST00000505534 KIF14Q15058 1648 aa27.96■■■□□ 2.07
DDR1-257ENST00000505534 ZNF518AQ6AHZ1 1483 aa27.96■■■□□ 2.07
DDR1-257ENST00000505534 CERKQ8TCT0 537 aa27.96■■■□□ 2.07
DDR1-257ENST00000505534 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
DDR1-257ENST00000505534 PREX1Q8TCU6 1659 aa27.96■■■□□ 2.07
DDR1-257ENST00000505534 TROQ12816 1431 aaPredicted RBP27.95■■■□□ 2.07
DDR1-257ENST00000505534 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
DDR1-257ENST00000505534 CLIP1P30622 1438 aa27.92■■■□□ 2.06
DDR1-257ENST00000505534 KDM5CP41229 1560 aa27.91■■■□□ 2.06
DDR1-257ENST00000505534 AFAP1Q8N556 730 aa27.91■■■□□ 2.06
DDR1-257ENST00000505534 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
DDR1-257ENST00000505534 LRRIQ1Q96JM4 1722 aa27.88■■■□□ 2.05
DDR1-257ENST00000505534 MYT1LQ9UL68 1186 aa27.87■■■□□ 2.05
DDR1-257ENST00000505534 CDC42BPBQ9Y5S2 1711 aa27.87■■■□□ 2.05
DDR1-257ENST00000505534 DMRT2Q9Y5R5 561 aa27.84■■■□□ 2.05
DDR1-257ENST00000505534 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
DDR1-257ENST00000505534 DIP2CQ9Y2E4 1556 aa27.84■■■□□ 2.05
DDR1-257ENST00000505534 STRCQ7RTU9 1775 aa27.83■■■□□ 2.05
DDR1-257ENST00000505534 MLH3Q9UHC1 1453 aa27.82■■■□□ 2.04
DDR1-257ENST00000505534 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
DDR1-257ENST00000505534 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
DDR1-257ENST00000505534 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
DDR1-257ENST00000505534 C3P01024 1663 aa27.75■■■□□ 2.03
DDR1-257ENST00000505534 AGLP35573 1532 aa27.75■■■□□ 2.03
DDR1-257ENST00000505534 ABCC1P33527 1531 aa27.74■■■□□ 2.03
DDR1-257ENST00000505534 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
DDR1-257ENST00000505534 CCDC18Q5T9S5 1454 aa27.74■■■□□ 2.03
DDR1-257ENST00000505534 TRAPPC8Q9Y2L5 1435 aa27.74■■■□□ 2.03
DDR1-257ENST00000505534 ITSN2Q9NZM3 1697 aa27.73■■■□□ 2.03
DDR1-257ENST00000505534 ESF1Q9H501 851 aaKnown RBP27.73■■■□□ 2.03
DDR1-257ENST00000505534 CASKIN1Q8WXD9 1431 aa27.72■■■□□ 2.03
DDR1-257ENST00000505534 KIDINS220Q9ULH0 1771 aa27.69■■■□□ 2.02
DDR1-257ENST00000505534 CDC42BPAQ5VT25 1732 aa27.69■■■□□ 2.02
DDR1-257ENST00000505534 PTPRTO14522 1441 aa27.67■■■□□ 2.02
DDR1-257ENST00000505534 CNTLNQ9NXG0 1405 aa27.65■■■□□ 2.02
DDR1-257ENST00000505534 SAMD9LQ8IVG5 1584 aa27.59■■■□□ 2.01
DDR1-257ENST00000505534 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2.01
DDR1-257ENST00000505534 ZNF777Q9ULD5 760 aaPredicted RBP27.57■■■□□ 2
DDR1-257ENST00000505534 MROH2AA6NES4 1674 aa27.56■■■□□ 2
DDR1-257ENST00000505534 NCOA1Q15788 1441 aa27.54■■■□□ 2
DDR1-257ENST00000505534 GPATCH8Q9UKJ3 1502 aaKnown RBP27.53■■■□□ 2
DDR1-257ENST00000505534 NPATQ14207 1427 aa27.53■■■□□ 2
DDR1-257ENST00000505534 DISP3Q9P2K9 1392 aa27.53■■■□□ 2
DDR1-257ENST00000505534 SPAG9O60271 1321 aaKnown RBP27.53■■■□□ 2
DDR1-257ENST00000505534 LTBP4Q8N2S1 1624 aa27.52■■■□□ 2
DDR1-257ENST00000505534 SYCP2Q9BX26 1530 aa27.51■■■□□ 2
DDR1-257ENST00000505534 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
DDR1-257ENST00000505534 SUPT6HQ7KZ85 1726 aaKnown RBP27.51■■□□□ 1.99
DDR1-257ENST00000505534 HNRNPMP52272 730 aaKnown RBP eCLIP27.5■■□□□ 1.99
DDR1-257ENST00000505534 IQSEC2Q5JU85 1478 aa27.49■■□□□ 1.99
DDR1-257ENST00000505534 KIAA1107Q9UPP5 1409 aa27.48■■□□□ 1.99
DDR1-257ENST00000505534 CAMSAP1Q5T5Y3 1602 aa27.48■■□□□ 1.99
DDR1-257ENST00000505534 PLEKHH2Q8IVE3 1493 aa27.46■■□□□ 1.99
DDR1-257ENST00000505534 ATP7AQ04656 1500 aa27.46■■□□□ 1.99
DDR1-257ENST00000505534 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
DDR1-257ENST00000505534 ILDR2Q71H61 639 aa27.44■■□□□ 1.98
DDR1-257ENST00000505534 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
DDR1-257ENST00000505534 PLXNC1O60486 1568 aa27.43■■□□□ 1.98
DDR1-257ENST00000505534 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
DDR1-257ENST00000505534 A2MP01023 1474 aa27.42■■□□□ 1.98
DDR1-257ENST00000505534 CCNB3Q8WWL7 1395 aa27.41■■□□□ 1.98
DDR1-257ENST00000505534 NCKAP5LQ9HCH0 1330 aa27.39■■□□□ 1.97
DDR1-257ENST00000505534 ZNF142P52746 1687 aaPredicted RBP27.38■■□□□ 1.97
DDR1-257ENST00000505534 SOCS7O14512 581 aa27.38■■□□□ 1.97
DDR1-257ENST00000505534 GGT6Q6P531 493 aa27.37■■□□□ 1.97
DDR1-257ENST00000505534 PTPRKQ15262 1439 aa27.36■■□□□ 1.97
DDR1-257ENST00000505534 PKD2Q13563 968 aa27.36■■□□□ 1.97
DDR1-257ENST00000505534 PPP6R1Q9UPN7 881 aa27.36■■□□□ 1.97
DDR1-257ENST00000505534 MYO3AQ8NEV4 1616 aa27.36■■□□□ 1.97
DDR1-257ENST00000505534 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
DDR1-257ENST00000505534 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
DDR1-257ENST00000505534 PLA2R1Q13018 1463 aa27.35■■□□□ 1.97
DDR1-257ENST00000505534 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
DDR1-257ENST00000505534 CEP170BQ9Y4F5 1589 aaPredicted RBP27.32■■□□□ 1.96
DDR1-257ENST00000505534 ZNF335Q9H4Z2 1342 aaPredicted RBP27.31■■□□□ 1.96
DDR1-257ENST00000505534 TCOF1Q13428 1488 aaKnown RBP27.29■■□□□ 1.96
DDR1-257ENST00000505534 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
DDR1-257ENST00000505534 TIAM1Q13009 1591 aa27.26■■□□□ 1.95
DDR1-257ENST00000505534 MBD5Q9P267 1494 aa27.25■■□□□ 1.95
DDR1-257ENST00000505534 RTEL1-TNFRSF6BF6WH68 1400 aa27.25■■□□□ 1.95
DDR1-257ENST00000505534 UBAP1LF5GYI3 381 aa27.24■■□□□ 1.95
DDR1-257ENST00000505534 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
DDR1-257ENST00000505534 A2ML1A8K2U0 1454 aa27.22■■□□□ 1.95
DDR1-257ENST00000505534 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
DDR1-257ENST00000505534 DNMT1P26358 1616 aaKnown RBP27.19■■□□□ 1.94
DDR1-257ENST00000505534 CEP162Q5TB80 1403 aa27.19■■□□□ 1.94
DDR1-257ENST00000505534 KIF3BO15066 747 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms