RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 MRC2Q9UBG0 1479 aa22.26■■□□□ 1.15
DDX41-205ENST00000505081 ABCC5O15440 1437 aa22.25■■□□□ 1.15
DDX41-205ENST00000505081 ANKRD30BQ9BXX2 1392 aa22.23■■□□□ 1.15
DDX41-205ENST00000505081 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
DDX41-205ENST00000505081 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
DDX41-205ENST00000505081 SLC4A1APQ9BWU0 796 aaKnown RBP22.23■■□□□ 1.15
DDX41-205ENST00000505081 RBM19Q9Y4C8 960 aaKnown RBP22.23■■□□□ 1.15
DDX41-205ENST00000505081 NUP153P49790 1475 aaKnown RBP22.22■■□□□ 1.15
DDX41-205ENST00000505081 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
DDX41-205ENST00000505081 KIAA0556O60303 1618 aa22.2■■□□□ 1.14
DDX41-205ENST00000505081 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
DDX41-205ENST00000505081 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
DDX41-205ENST00000505081 NCOA1Q15788 1441 aa22.18■■□□□ 1.14
DDX41-205ENST00000505081 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
DDX41-205ENST00000505081 ROCK1Q13464 1354 aa22.18■■□□□ 1.14
DDX41-205ENST00000505081 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
DDX41-205ENST00000505081 PRKRIP1Q9H875 184 aaPredicted RBP22.17■■□□□ 1.14
DDX41-205ENST00000505081 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
DDX41-205ENST00000505081 TEX14Q8IWB6 1497 aa22.17■■□□□ 1.14
DDX41-205ENST00000505081 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
DDX41-205ENST00000505081 ZNF777Q9ULD5 760 aaPredicted RBP22.15■■□□□ 1.14
DDX41-205ENST00000505081 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
DDX41-205ENST00000505081 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.13
DDX41-205ENST00000505081 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
DDX41-205ENST00000505081 MRS2Q9HD23 443 aa22.13■■□□□ 1.13
DDX41-205ENST00000505081 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
DDX41-205ENST00000505081 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
DDX41-205ENST00000505081 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
DDX41-205ENST00000505081 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
DDX41-205ENST00000505081 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
DDX41-205ENST00000505081 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.13
DDX41-205ENST00000505081 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.13
DDX41-205ENST00000505081 PZPP20742 1482 aa22.08■■□□□ 1.13
DDX41-205ENST00000505081 FBLN2P98095 1184 aa22.08■■□□□ 1.12
DDX41-205ENST00000505081 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
DDX41-205ENST00000505081 POLR3GLQ9BT43 218 aa22.07■■□□□ 1.12
DDX41-205ENST00000505081 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
DDX41-205ENST00000505081 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
DDX41-205ENST00000505081 KIF14Q15058 1648 aa22.03■■□□□ 1.12
DDX41-205ENST00000505081 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
DDX41-205ENST00000505081 GPATCH8Q9UKJ3 1502 aaKnown RBP22.03■■□□□ 1.12
DDX41-205ENST00000505081 PKD2Q13563 968 aa22.02■■□□□ 1.12
DDX41-205ENST00000505081 SENP3-EIF4A1A0A087X0R7 540 aa22■■□□□ 1.11
DDX41-205ENST00000505081 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
DDX41-205ENST00000505081 ZBED9Q6R2W3 1325 aa21.97■■□□□ 1.11
DDX41-205ENST00000505081 MSH5O43196 834 aa21.96■■□□□ 1.11
DDX41-205ENST00000505081 KIAA1107Q9UPP5 1409 aa21.96■■□□□ 1.11
DDX41-205ENST00000505081 USP47Q96K76 1375 aa21.95■■□□□ 1.1
DDX41-205ENST00000505081 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
DDX41-205ENST00000505081 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
DDX41-205ENST00000505081 B4GALNT3Q6L9W6 998 aa21.93■■□□□ 1.1
DDX41-205ENST00000505081 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
DDX41-205ENST00000505081 JPH4Q96JJ6 628 aa21.93■■□□□ 1.1
DDX41-205ENST00000505081 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
DDX41-205ENST00000505081 POLR1AO95602 1720 aaPredicted RBP21.93■■□□□ 1.1
DDX41-205ENST00000505081 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
DDX41-205ENST00000505081 DHX29Q7Z478 1369 aaKnown RBP21.92■■□□□ 1.1
DDX41-205ENST00000505081 ANKRD30AQ9BXX3 1397 aa21.92■■□□□ 1.1
DDX41-205ENST00000505081 ANKRD50Q9ULJ7 1429 aa21.91■■□□□ 1.1
DDX41-205ENST00000505081 ADGRL2O95490 1459 aa21.9■■□□□ 1.1
DDX41-205ENST00000505081 CROCC2H7BZ55 1655 aa21.89■■□□□ 1.09
DDX41-205ENST00000505081 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
DDX41-205ENST00000505081 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
DDX41-205ENST00000505081 NUP155O75694 1391 aa21.88■■□□□ 1.09
DDX41-205ENST00000505081 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
DDX41-205ENST00000505081 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
DDX41-205ENST00000505081 ADCY10Q96PN6 1610 aa21.86■■□□□ 1.09
DDX41-205ENST00000505081 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
DDX41-205ENST00000505081 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
DDX41-205ENST00000505081 ERICH6BQ5W0A0 696 aa21.85■■□□□ 1.09
DDX41-205ENST00000505081 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.09
DDX41-205ENST00000505081 KDM5CP41229 1560 aa21.83■■□□□ 1.09
DDX41-205ENST00000505081 CARD11Q9BXL7 1154 aa21.83■■□□□ 1.08
DDX41-205ENST00000505081 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.08
DDX41-205ENST00000505081 CDC42BPAQ5VT25 1732 aa21.82■■□□□ 1.08
DDX41-205ENST00000505081 ATP10BO94823 1461 aa21.81■■□□□ 1.08
DDX41-205ENST00000505081 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
DDX41-205ENST00000505081 NUP160Q12769 1436 aa21.79■■□□□ 1.08
DDX41-205ENST00000505081 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
DDX41-205ENST00000505081 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
DDX41-205ENST00000505081 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
DDX41-205ENST00000505081 ST20-MTHFSA0A0A6YYL1 179 aa21.78■■□□□ 1.08
DDX41-205ENST00000505081 DCAF11Q8TEB1 546 aa21.78■■□□□ 1.08
DDX41-205ENST00000505081 ABCA8O94911 1581 aa21.75■■□□□ 1.07
DDX41-205ENST00000505081 RALGAPBQ86X10 1494 aa21.75■■□□□ 1.07
DDX41-205ENST00000505081 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
DDX41-205ENST00000505081 KIF15Q9NS87 1388 aa21.75■■□□□ 1.07
DDX41-205ENST00000505081 SMG6Q86US8 1419 aaKnown RBP21.74■■□□□ 1.07
DDX41-205ENST00000505081 PNISRQ8TF01 805 aaKnown RBP21.74■■□□□ 1.07
DDX41-205ENST00000505081 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
DDX41-205ENST00000505081 NUDCQ9Y266 331 aa21.73■■□□□ 1.07
DDX41-205ENST00000505081 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
DDX41-205ENST00000505081 ARID4BQ4LE39 1312 aaPredicted RBP21.7■■□□□ 1.06
DDX41-205ENST00000505081 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
DDX41-205ENST00000505081 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
DDX41-205ENST00000505081 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
DDX41-205ENST00000505081 KDM5DQ9BY66 1539 aa21.65■■□□□ 1.06
DDX41-205ENST00000505081 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
DDX41-205ENST00000505081 PTPRGP23470 1445 aa21.64■■□□□ 1.05
DDX41-205ENST00000505081 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms