RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 ADCY10Q96PN6 1610 aa13.12□□□□□ -0.31
LINC02239-201ENST00000504339 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
LINC02239-201ENST00000504339 DNMT1P26358 1616 aaKnown RBP13.11□□□□□ -0.31
LINC02239-201ENST00000504339 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
LINC02239-201ENST00000504339 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
LINC02239-201ENST00000504339 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
LINC02239-201ENST00000504339 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
LINC02239-201ENST00000504339 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
LINC02239-201ENST00000504339 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
LINC02239-201ENST00000504339 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
LINC02239-201ENST00000504339 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
LINC02239-201ENST00000504339 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
LINC02239-201ENST00000504339 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
LINC02239-201ENST00000504339 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
LINC02239-201ENST00000504339 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
LINC02239-201ENST00000504339 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
LINC02239-201ENST00000504339 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
LINC02239-201ENST00000504339 FOXD1Q16676 465 aa13.04□□□□□ -0.32
LINC02239-201ENST00000504339 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
LINC02239-201ENST00000504339 CDC42BPAQ5VT25 1732 aa13.02□□□□□ -0.32
LINC02239-201ENST00000504339 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
LINC02239-201ENST00000504339 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
LINC02239-201ENST00000504339 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
LINC02239-201ENST00000504339 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
LINC02239-201ENST00000504339 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
LINC02239-201ENST00000504339 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
LINC02239-201ENST00000504339 PZPP20742 1482 aa12.98□□□□□ -0.33
LINC02239-201ENST00000504339 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
LINC02239-201ENST00000504339 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
LINC02239-201ENST00000504339 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
LINC02239-201ENST00000504339 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
LINC02239-201ENST00000504339 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
LINC02239-201ENST00000504339 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC02239-201ENST00000504339 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
LINC02239-201ENST00000504339 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
LINC02239-201ENST00000504339 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
LINC02239-201ENST00000504339 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
LINC02239-201ENST00000504339 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
LINC02239-201ENST00000504339 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
LINC02239-201ENST00000504339 CDC42BPBQ9Y5S2 1711 aa12.94□□□□□ -0.34
LINC02239-201ENST00000504339 SAMD9LQ8IVG5 1584 aa12.93□□□□□ -0.34
LINC02239-201ENST00000504339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC02239-201ENST00000504339 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
LINC02239-201ENST00000504339 ANKRD50Q9ULJ7 1429 aa12.93□□□□□ -0.34
LINC02239-201ENST00000504339 DDX10Q13206 875 aaKnown RBP12.92□□□□□ -0.34
LINC02239-201ENST00000504339 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
LINC02239-201ENST00000504339 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
LINC02239-201ENST00000504339 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
LINC02239-201ENST00000504339 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
LINC02239-201ENST00000504339 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
LINC02239-201ENST00000504339 TEX14Q8IWB6 1497 aa12.9□□□□□ -0.34
LINC02239-201ENST00000504339 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
LINC02239-201ENST00000504339 TSPY4P0CV99 314 aa12.88□□□□□ -0.35
LINC02239-201ENST00000504339 TSPY10P0CW01 314 aa12.88□□□□□ -0.35
LINC02239-201ENST00000504339 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
LINC02239-201ENST00000504339 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
LINC02239-201ENST00000504339 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
LINC02239-201ENST00000504339 PKD2Q13563 968 aa12.87□□□□□ -0.35
LINC02239-201ENST00000504339 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
LINC02239-201ENST00000504339 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
LINC02239-201ENST00000504339 ARHGEF12Q9NZN5 1544 aa12.87□□□□□ -0.35
LINC02239-201ENST00000504339 SYCP2Q9BX26 1530 aa12.86□□□□□ -0.35
LINC02239-201ENST00000504339 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
LINC02239-201ENST00000504339 NUP155O75694 1391 aa12.85□□□□□ -0.35
LINC02239-201ENST00000504339 HSPA5P11021 654 aaKnown RBP12.85□□□□□ -0.35
LINC02239-201ENST00000504339 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
LINC02239-201ENST00000504339 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
LINC02239-201ENST00000504339 PLCH2O75038 1416 aa12.84□□□□□ -0.35
LINC02239-201ENST00000504339 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
LINC02239-201ENST00000504339 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
LINC02239-201ENST00000504339 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
LINC02239-201ENST00000504339 MYO5CQ9NQX4 1742 aa12.8□□□□□ -0.36
LINC02239-201ENST00000504339 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
LINC02239-201ENST00000504339 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02239-201ENST00000504339 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
LINC02239-201ENST00000504339 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
LINC02239-201ENST00000504339 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.36
LINC02239-201ENST00000504339 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
LINC02239-201ENST00000504339 ABCC1P33527 1531 aa12.76□□□□□ -0.37
LINC02239-201ENST00000504339 WDR7Q9Y4E6 1490 aa12.76□□□□□ -0.37
LINC02239-201ENST00000504339 PLXNC1O60486 1568 aa12.75□□□□□ -0.37
LINC02239-201ENST00000504339 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
LINC02239-201ENST00000504339 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
LINC02239-201ENST00000504339 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
LINC02239-201ENST00000504339 UNC13BO14795 1591 aa12.73□□□□□ -0.37
LINC02239-201ENST00000504339 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
LINC02239-201ENST00000504339 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
LINC02239-201ENST00000504339 CCDC7Q96M83 1385 aa12.72□□□□□ -0.37
LINC02239-201ENST00000504339 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.37
LINC02239-201ENST00000504339 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
LINC02239-201ENST00000504339 ANP32CO43423 234 aa12.71□□□□□ -0.37
LINC02239-201ENST00000504339 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
LINC02239-201ENST00000504339 ASXL2Q76L83 1435 aa12.71□□□□□ -0.38
LINC02239-201ENST00000504339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.38
LINC02239-201ENST00000504339 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
LINC02239-201ENST00000504339 ZNF326Q5BKZ1 582 aaKnown RBP12.69□□□□□ -0.38
LINC02239-201ENST00000504339 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
LINC02239-201ENST00000504339 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
LINC02239-201ENST00000504339 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
LINC02239-201ENST00000504339 FANCAO15360 1455 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms