RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
SDHA-204ENST00000504309 CAMSAP2Q08AD1 1489 aa25.94■■□□□ 1.74
SDHA-204ENST00000504309 CENPBP07199 599 aaPredicted RBP25.93■■□□□ 1.74
SDHA-204ENST00000504309 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
SDHA-204ENST00000504309 GPATCH8Q9UKJ3 1502 aaKnown RBP25.92■■□□□ 1.74
SDHA-204ENST00000504309 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
SDHA-204ENST00000504309 ROCK1Q13464 1354 aa25.91■■□□□ 1.74
SDHA-204ENST00000504309 ATP10BO94823 1461 aa25.89■■□□□ 1.74
SDHA-204ENST00000504309 TONSLQ96HA7 1378 aa25.88■■□□□ 1.73
SDHA-204ENST00000504309 PPP1R15AO75807 674 aaPredicted RBP25.87■■□□□ 1.73
SDHA-204ENST00000504309 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SDHA-204ENST00000504309 YTHDC1Q96MU7 727 aaKnown RBP25.84■■□□□ 1.73
SDHA-204ENST00000504309 ABCC10Q5T3U5 1492 aa25.83■■□□□ 1.73
SDHA-204ENST00000504309 CFDP1Q9UEE9 299 aaPredicted RBP25.83■■□□□ 1.72
SDHA-204ENST00000504309 TRIM52Q96A61 297 aa25.81■■□□□ 1.72
SDHA-204ENST00000504309 PTPRGP23470 1445 aa25.81■■□□□ 1.72
SDHA-204ENST00000504309 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
SDHA-204ENST00000504309 PLEKHD1A6NEE1 506 aa25.76■■□□□ 1.71
SDHA-204ENST00000504309 ADGRL2O95490 1459 aa25.75■■□□□ 1.71
SDHA-204ENST00000504309 MPHOSPH9Q99550 1183 aa25.75■■□□□ 1.71
SDHA-204ENST00000504309 ZNF777Q9ULD5 760 aaPredicted RBP25.73■■□□□ 1.71
SDHA-204ENST00000504309 NCOA1Q15788 1441 aa25.72■■□□□ 1.71
SDHA-204ENST00000504309 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
SDHA-204ENST00000504309 PREX2Q70Z35 1606 aa25.7■■□□□ 1.7
SDHA-204ENST00000504309 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
SDHA-204ENST00000504309 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
SDHA-204ENST00000504309 FOXD1Q16676 465 aa25.65■■□□□ 1.7
SDHA-204ENST00000504309 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
SDHA-204ENST00000504309 PZPP20742 1482 aa25.64■■□□□ 1.7
SDHA-204ENST00000504309 ABCC2Q92887 1545 aa25.64■■□□□ 1.7
SDHA-204ENST00000504309 SAMD9LQ8IVG5 1584 aa25.63■■□□□ 1.69
SDHA-204ENST00000504309 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
SDHA-204ENST00000504309 TTC37Q6PGP7 1564 aa25.62■■□□□ 1.69
SDHA-204ENST00000504309 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
SDHA-204ENST00000504309 GTF3C3Q9Y5Q9 886 aa25.62■■□□□ 1.69
SDHA-204ENST00000504309 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
SDHA-204ENST00000504309 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
SDHA-204ENST00000504309 C9orf84Q5VXU9 1444 aa25.6■■□□□ 1.69
SDHA-204ENST00000504309 DDX10Q13206 875 aaKnown RBP25.59■■□□□ 1.69
SDHA-204ENST00000504309 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
SDHA-204ENST00000504309 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
SDHA-204ENST00000504309 TEX14Q8IWB6 1497 aa25.56■■□□□ 1.68
SDHA-204ENST00000504309 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
SDHA-204ENST00000504309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.55■■□□□ 1.682e-7■■□□□ 12
SDHA-204ENST00000504309 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
SDHA-204ENST00000504309 ZCCHC11Q5TAX3 1644 aaKnown RBP25.54■■□□□ 1.68
SDHA-204ENST00000504309 CCDC141Q6ZP82 1450 aa25.5■■□□□ 1.67
SDHA-204ENST00000504309 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
SDHA-204ENST00000504309 ARHGAP5Q13017 1502 aa25.49■■□□□ 1.67
SDHA-204ENST00000504309 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
SDHA-204ENST00000504309 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
SDHA-204ENST00000504309 KIAA1107Q9UPP5 1409 aa25.47■■□□□ 1.67
SDHA-204ENST00000504309 KDM5DQ9BY66 1539 aa25.47■■□□□ 1.67
SDHA-204ENST00000504309 UHRF1BP1LA0JNW5 1464 aa25.44■■□□□ 1.66
SDHA-204ENST00000504309 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
SDHA-204ENST00000504309 TSPY4P0CV99 314 aa25.44■■□□□ 1.66
SDHA-204ENST00000504309 TSPY10P0CW01 314 aa25.44■■□□□ 1.66
SDHA-204ENST00000504309 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
SDHA-204ENST00000504309 KCNH8Q96L42 1107 aa25.41■■□□□ 1.66
SDHA-204ENST00000504309 HSPA5P11021 654 aaKnown RBP25.39■■□□□ 1.65
SDHA-204ENST00000504309 PKD2Q13563 968 aa25.38■■□□□ 1.65
SDHA-204ENST00000504309 POLR1AO95602 1720 aaPredicted RBP25.37■■□□□ 1.65
SDHA-204ENST00000504309 NUP155O75694 1391 aa25.37■■□□□ 1.65
SDHA-204ENST00000504309 NBPF8Q3BBV2 869 aa25.36■■□□□ 1.65
SDHA-204ENST00000504309 PLXNC1O60486 1568 aa25.36■■□□□ 1.65
SDHA-204ENST00000504309 EIF4G2P78344 907 aaKnown RBP eCLIP25.33■■□□□ 1.65
SDHA-204ENST00000504309 PLEKHH2Q8IVE3 1493 aa25.32■■□□□ 1.64
SDHA-204ENST00000504309 RSPH4AQ5TD94 716 aa25.32■■□□□ 1.64
SDHA-204ENST00000504309 UNC13BO14795 1591 aa25.32■■□□□ 1.64
SDHA-204ENST00000504309 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
SDHA-204ENST00000504309 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
SDHA-204ENST00000504309 FAM135AQ9P2D6 1515 aa25.3■■□□□ 1.64
SDHA-204ENST00000504309 ANP32CO43423 234 aa25.28■■□□□ 1.64
SDHA-204ENST00000504309 PLCH2O75038 1416 aa25.28■■□□□ 1.64
SDHA-204ENST00000504309 ABCC1P33527 1531 aa25.28■■□□□ 1.64
SDHA-204ENST00000504309 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
SDHA-204ENST00000504309 CCER2I3L3R5 266 aa25.23■■□□□ 1.63
SDHA-204ENST00000504309 IQGAP3Q86VI3 1631 aa25.22■■□□□ 1.63
SDHA-204ENST00000504309 DUOX2Q9NRD8 1548 aa25.2■■□□□ 1.62
SDHA-204ENST00000504309 ARAP3Q8WWN8 1544 aa25.19■■□□□ 1.62
SDHA-204ENST00000504309 CNTLNQ9NXG0 1405 aa25.18■■□□□ 1.62
SDHA-204ENST00000504309 CCDC7Q96M83 1385 aa25.18■■□□□ 1.62
SDHA-204ENST00000504309 C11orf95C9JLR9 678 aaPredicted RBP25.17■■□□□ 1.62
SDHA-204ENST00000504309 KDM5CP41229 1560 aa25.17■■□□□ 1.62
SDHA-204ENST00000504309 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
SDHA-204ENST00000504309 UHRF1BP1Q6BDS2 1440 aa25.16■■□□□ 1.62
SDHA-204ENST00000504309 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
SDHA-204ENST00000504309 EFCAB2Q5VUJ9 269 aa25.15■■□□□ 1.62
SDHA-204ENST00000504309 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
SDHA-204ENST00000504309 ABCA9Q8IUA7 1624 aa25.15■■□□□ 1.62
SDHA-204ENST00000504309 TRAPPC8Q9Y2L5 1435 aa25.14■■□□□ 1.62
SDHA-204ENST00000504309 RALGAPBQ86X10 1494 aa25.13■■□□□ 1.61
SDHA-204ENST00000504309 ERBINQ96RT1 1412 aa25.13■■□□□ 1.61
SDHA-204ENST00000504309 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
SDHA-204ENST00000504309 ZFYVE16Q7Z3T8 1539 aa25.11■■□□□ 1.61
SDHA-204ENST00000504309 USP47Q96K76 1375 aa25.09■■□□□ 1.61
SDHA-204ENST00000504309 KIF7Q2M1P5 1343 aa25.08■■□□□ 1.6
SDHA-204ENST00000504309 PLA2R1Q13018 1463 aa25.07■■□□□ 1.6
SDHA-204ENST00000504309 CCDC144AA2RUR9 1427 aa25.06■■□□□ 1.6
SDHA-204ENST00000504309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.05■■□□□ 1.61e-11■■■■□ 21.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms