RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 FER1L4A9Z1Z3 1794 aa28.15■■■□□ 2.1
POLR2J3-208ENST00000504101 MLECQ14165 292 aa28.14■■■□□ 2.1
POLR2J3-208ENST00000504101 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
POLR2J3-208ENST00000504101 ATP1B4Q9UN42 357 aaPredicted RBP28.11■■■□□ 2.09
POLR2J3-208ENST00000504101 MYO5CQ9NQX4 1742 aa28.11■■■□□ 2.09
POLR2J3-208ENST00000504101 UBTFP17480 764 aaKnown RBP28.08■■■□□ 2.09
POLR2J3-208ENST00000504101 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
POLR2J3-208ENST00000504101 C9orf84Q5VXU9 1444 aa28.08■■■□□ 2.09
POLR2J3-208ENST00000504101 ATP10AO60312 1499 aa28.08■■■□□ 2.09
POLR2J3-208ENST00000504101 EFCAB2Q5VUJ9 269 aa28.07■■■□□ 2.08
POLR2J3-208ENST00000504101 ARHGAP35Q9NRY4 1499 aa28.06■■■□□ 2.08
POLR2J3-208ENST00000504101 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
POLR2J3-208ENST00000504101 KIF14Q15058 1648 aa28.05■■■□□ 2.08
POLR2J3-208ENST00000504101 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
POLR2J3-208ENST00000504101 ZNF518AQ6AHZ1 1483 aa28.01■■■□□ 2.07
POLR2J3-208ENST00000504101 TROQ12816 1431 aaPredicted RBP28■■■□□ 2.07
POLR2J3-208ENST00000504101 ARHGAP5Q13017 1502 aa27.99■■■□□ 2.07
POLR2J3-208ENST00000504101 CLIP1P30622 1438 aa27.97■■■□□ 2.07
POLR2J3-208ENST00000504101 KDM5CP41229 1560 aa27.97■■■□□ 2.07
POLR2J3-208ENST00000504101 PREX1Q8TCU6 1659 aa27.97■■■□□ 2.07
POLR2J3-208ENST00000504101 CERKQ8TCT0 537 aa27.94■■■□□ 2.06
POLR2J3-208ENST00000504101 AFAP1Q8N556 730 aa27.92■■■□□ 2.06
POLR2J3-208ENST00000504101 LRRIQ1Q96JM4 1722 aa27.92■■■□□ 2.06
POLR2J3-208ENST00000504101 CEBPAP49715 358 aaPredicted RBP27.91■■■□□ 2.06
POLR2J3-208ENST00000504101 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
POLR2J3-208ENST00000504101 MYT1LQ9UL68 1186 aa27.89■■■□□ 2.06
POLR2J3-208ENST00000504101 CDC42BPBQ9Y5S2 1711 aa27.87■■■□□ 2.05
POLR2J3-208ENST00000504101 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
POLR2J3-208ENST00000504101 ABCA6Q8N139 1617 aa27.85■■■□□ 2.05
POLR2J3-208ENST00000504101 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
POLR2J3-208ENST00000504101 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.05
POLR2J3-208ENST00000504101 PREX2Q70Z35 1606 aa27.83■■■□□ 2.05
POLR2J3-208ENST00000504101 ABCC1P33527 1531 aa27.82■■■□□ 2.04
POLR2J3-208ENST00000504101 SETD1BQ9UPS6 1966 aaKnown RBP27.81■■■□□ 2.04
POLR2J3-208ENST00000504101 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
POLR2J3-208ENST00000504101 CCDC18Q5T9S5 1454 aa27.8■■■□□ 2.04
POLR2J3-208ENST00000504101 TRAPPC8Q9Y2L5 1435 aa27.79■■■□□ 2.04
POLR2J3-208ENST00000504101 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
POLR2J3-208ENST00000504101 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
POLR2J3-208ENST00000504101 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
POLR2J3-208ENST00000504101 AGLP35573 1532 aa27.77■■■□□ 2.04
POLR2J3-208ENST00000504101 CASKIN1Q8WXD9 1431 aa27.77■■■□□ 2.04
POLR2J3-208ENST00000504101 C3P01024 1663 aa27.77■■■□□ 2.04
POLR2J3-208ENST00000504101 ESF1Q9H501 851 aaKnown RBP27.73■■■□□ 2.03
POLR2J3-208ENST00000504101 KIDINS220Q9ULH0 1771 aa27.71■■■□□ 2.03
POLR2J3-208ENST00000504101 CDC42BPAQ5VT25 1732 aa27.71■■■□□ 2.03
POLR2J3-208ENST00000504101 FYCO1Q9BQS8 1478 aa27.66■■■□□ 2.02
POLR2J3-208ENST00000504101 PTPRTO14522 1441 aa27.66■■■□□ 2.02
POLR2J3-208ENST00000504101 CNTLNQ9NXG0 1405 aa27.66■■■□□ 2.02
POLR2J3-208ENST00000504101 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.01
POLR2J3-208ENST00000504101 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
POLR2J3-208ENST00000504101 ZNF777Q9ULD5 760 aaPredicted RBP27.61■■■□□ 2.01
POLR2J3-208ENST00000504101 NCOA1Q15788 1441 aa27.58■■■□□ 2
POLR2J3-208ENST00000504101 MROH2AA6NES4 1674 aa27.57■■■□□ 2
POLR2J3-208ENST00000504101 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
POLR2J3-208ENST00000504101 SPAG9O60271 1321 aaKnown RBP27.56■■■□□ 2
POLR2J3-208ENST00000504101 NPATQ14207 1427 aa27.55■■■□□ 2
POLR2J3-208ENST00000504101 SUPT6HQ7KZ85 1726 aaKnown RBP27.53■■■□□ 2
POLR2J3-208ENST00000504101 LTBP4Q8N2S1 1624 aa27.53■■■□□ 2
POLR2J3-208ENST00000504101 DISP3Q9P2K9 1392 aa27.53■■■□□ 2
POLR2J3-208ENST00000504101 ATP7AQ04656 1500 aa27.52■■■□□ 2
POLR2J3-208ENST00000504101 HNRNPMP52272 730 aaKnown RBP eCLIP27.52■■■□□ 2
POLR2J3-208ENST00000504101 ZMYM3Q14202 1370 aa27.5■■□□□ 1.99
POLR2J3-208ENST00000504101 CAMSAP1Q5T5Y3 1602 aa27.5■■□□□ 1.99
POLR2J3-208ENST00000504101 PLEKHH2Q8IVE3 1493 aa27.5■■□□□ 1.99
POLR2J3-208ENST00000504101 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
POLR2J3-208ENST00000504101 INO80Q9ULG1 1556 aaPredicted RBP27.49■■□□□ 1.99
POLR2J3-208ENST00000504101 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
POLR2J3-208ENST00000504101 IQSEC2Q5JU85 1478 aa27.47■■□□□ 1.99
POLR2J3-208ENST00000504101 CFDP1Q9UEE9 299 aaPredicted RBP27.47■■□□□ 1.99
POLR2J3-208ENST00000504101 CLTCQ00610 1675 aaKnown RBP27.46■■□□□ 1.99
POLR2J3-208ENST00000504101 A2MP01023 1474 aa27.46■■□□□ 1.99
POLR2J3-208ENST00000504101 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
POLR2J3-208ENST00000504101 ILDR2Q71H61 639 aa27.43■■□□□ 1.98
POLR2J3-208ENST00000504101 MYO3AQ8NEV4 1616 aa27.42■■□□□ 1.98
POLR2J3-208ENST00000504101 ZNF142P52746 1687 aaPredicted RBP27.42■■□□□ 1.98
POLR2J3-208ENST00000504101 SPATA31D1Q6ZQQ2 1576 aa27.41■■□□□ 1.98
POLR2J3-208ENST00000504101 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
POLR2J3-208ENST00000504101 PTPRKQ15262 1439 aa27.39■■□□□ 1.97
POLR2J3-208ENST00000504101 NCKAP5LQ9HCH0 1330 aa27.39■■□□□ 1.97
POLR2J3-208ENST00000504101 GGT6Q6P531 493 aa27.38■■□□□ 1.97
POLR2J3-208ENST00000504101 CEP170BQ9Y4F5 1589 aaPredicted RBP27.38■■□□□ 1.97
POLR2J3-208ENST00000504101 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
POLR2J3-208ENST00000504101 ADGBQ8N7X0 1667 aa27.37■■□□□ 1.97
POLR2J3-208ENST00000504101 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
POLR2J3-208ENST00000504101 ZNF335Q9H4Z2 1342 aaPredicted RBP27.34■■□□□ 1.97
POLR2J3-208ENST00000504101 PKD2Q13563 968 aa27.33■■□□□ 1.97
POLR2J3-208ENST00000504101 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
POLR2J3-208ENST00000504101 SOCS7O14512 581 aa27.32■■□□□ 1.96
POLR2J3-208ENST00000504101 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
POLR2J3-208ENST00000504101 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
POLR2J3-208ENST00000504101 ZNF644Q9H582 1327 aaPredicted RBP27.31■■□□□ 1.96
POLR2J3-208ENST00000504101 MBD5Q9P267 1494 aa27.29■■□□□ 1.96
POLR2J3-208ENST00000504101 RTEL1-TNFRSF6BF6WH68 1400 aa27.26■■□□□ 1.95
POLR2J3-208ENST00000504101 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
POLR2J3-208ENST00000504101 UBAP1LF5GYI3 381 aa27.24■■□□□ 1.95
POLR2J3-208ENST00000504101 A2ML1A8K2U0 1454 aa27.24■■□□□ 1.95
POLR2J3-208ENST00000504101 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
POLR2J3-208ENST00000504101 DNMT1P26358 1616 aaKnown RBP27.22■■□□□ 1.95
POLR2J3-208ENST00000504101 CCDC141Q6ZP82 1450 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms