RNA–Protein interactions for RNA: ENST00000504020.2

CCDC110-203, Transcript of coiled-coil domain containing 110, humanhuman

TSL 5

Gene CCDC110, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-203ENST00000504020 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCDC110-203ENST00000504020 POTEAQ6S8J7 498 aa9.73□□□□□ -0.85
CCDC110-203ENST00000504020 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
CCDC110-203ENST00000504020 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
CCDC110-203ENST00000504020 ZCCHC11Q5TAX3 1644 aaKnown RBP9.71□□□□□ -0.85
CCDC110-203ENST00000504020 UHRF1BP1Q6BDS2 1440 aa9.69□□□□□ -0.86
CCDC110-203ENST00000504020 AKT1S1Q96B36 256 aa9.69□□□□□ -0.86
CCDC110-203ENST00000504020 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
CCDC110-203ENST00000504020 WDR7Q9Y4E6 1490 aa9.68□□□□□ -0.86
CCDC110-203ENST00000504020 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
CCDC110-203ENST00000504020 TOM1O60784 492 aa9.68□□□□□ -0.86
CCDC110-203ENST00000504020 POGZQ7Z3K3 1410 aa9.67□□□□□ -0.86
CCDC110-203ENST00000504020 UACAQ9BZF9 1416 aa9.65□□□□□ -0.86
CCDC110-203ENST00000504020 EVX2Q03828 476 aa9.65□□□□□ -0.86
CCDC110-203ENST00000504020 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.86
CCDC110-203ENST00000504020 ARHGEF40Q8TER5 1519 aa9.65□□□□□ -0.86
CCDC110-203ENST00000504020 SIGLEC1Q9BZZ2 1709 aa9.65□□□□□ -0.87
CCDC110-203ENST00000504020 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
CCDC110-203ENST00000504020 TTBK1Q5TCY1 1321 aaPredicted RBP9.64□□□□□ -0.87
CCDC110-203ENST00000504020 FRMPD1Q5SYB0 1578 aa9.64□□□□□ -0.87
CCDC110-203ENST00000504020 FANCAO15360 1455 aa9.64□□□□□ -0.87
CCDC110-203ENST00000504020 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
CCDC110-203ENST00000504020 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
CCDC110-203ENST00000504020 RAPGEF3O95398 923 aa9.63□□□□□ -0.87
CCDC110-203ENST00000504020 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
CCDC110-203ENST00000504020 CEBPAP49715 358 aaPredicted RBP9.59□□□□□ -0.87
CCDC110-203ENST00000504020 ALKQ9UM73 1620 aa9.59□□□□□ -0.87
CCDC110-203ENST00000504020 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC110-203ENST00000504020 ARHGEF12Q9NZN5 1544 aa9.56□□□□□ -0.88
CCDC110-203ENST00000504020 RBM33Q96EV2 1170 aaKnown RBP9.56□□□□□ -0.88
CCDC110-203ENST00000504020 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
CCDC110-203ENST00000504020 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
CCDC110-203ENST00000504020 PTPRKQ15262 1439 aa9.55□□□□□ -0.88
CCDC110-203ENST00000504020 MLECQ14165 292 aa9.54□□□□□ -0.88
CCDC110-203ENST00000504020 KCNH8Q96L42 1107 aa9.54□□□□□ -0.88
CCDC110-203ENST00000504020 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
CCDC110-203ENST00000504020 AKNAQ7Z591 1439 aa9.53□□□□□ -0.88
CCDC110-203ENST00000504020 SETBP1Q9Y6X0 1596 aa9.53□□□□□ -0.88
CCDC110-203ENST00000504020 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
CCDC110-203ENST00000504020 NEO1Q92859 1461 aa9.52□□□□□ -0.89
CCDC110-203ENST00000504020 CPS1P31327 1500 aa9.51□□□□□ -0.89
CCDC110-203ENST00000504020 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
CCDC110-203ENST00000504020 C3P01024 1663 aa9.48□□□□□ -0.89
CCDC110-203ENST00000504020 KCNA4P22459 653 aa9.48□□□□□ -0.89
CCDC110-203ENST00000504020 LHX8Q68G74 356 aa9.48□□□□□ -0.89
CCDC110-203ENST00000504020 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
CCDC110-203ENST00000504020 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
CCDC110-203ENST00000504020 ABCA9Q8IUA7 1624 aa9.46□□□□□ -0.89
CCDC110-203ENST00000504020 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.9
CCDC110-203ENST00000504020 PKD2Q13563 968 aa9.45□□□□□ -0.9
CCDC110-203ENST00000504020 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
CCDC110-203ENST00000504020 ZFYVE16Q7Z3T8 1539 aa9.45□□□□□ -0.9
CCDC110-203ENST00000504020 LRP5O75197 1615 aa9.45□□□□□ -0.9
CCDC110-203ENST00000504020 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
CCDC110-203ENST00000504020 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
CCDC110-203ENST00000504020 SUPT6HQ7KZ85 1726 aaKnown RBP9.44□□□□□ -0.9
CCDC110-203ENST00000504020 FHOD3Q2V2M9 1422 aa9.43□□□□□ -0.9
CCDC110-203ENST00000504020 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
CCDC110-203ENST00000504020 LRRC7Q96NW7 1537 aa9.42□□□□□ -0.9
CCDC110-203ENST00000504020 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
CCDC110-203ENST00000504020 TCOF1Q13428 1488 aaKnown RBP9.42□□□□□ -0.9
CCDC110-203ENST00000504020 DISP1Q96F81 1524 aa9.41□□□□□ -0.9
CCDC110-203ENST00000504020 DENND4BO75064 1496 aaPredicted RBP9.41□□□□□ -0.9
CCDC110-203ENST00000504020 SLC34A2O95436 690 aa9.41□□□□□ -0.9
CCDC110-203ENST00000504020 MYCNP04198 464 aaPredicted RBP9.41□□□□□ -0.9
CCDC110-203ENST00000504020 YY1P25490 414 aa9.41□□□□□ -0.9
CCDC110-203ENST00000504020 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.9
CCDC110-203ENST00000504020 SHANK2Q9UPX8 1470 aa9.4□□□□□ -0.9
CCDC110-203ENST00000504020 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
CCDC110-203ENST00000504020 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
CCDC110-203ENST00000504020 ZBTB12Q9Y330 459 aaPredicted RBP9.39□□□□□ -0.91
CCDC110-203ENST00000504020 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
CCDC110-203ENST00000504020 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
CCDC110-203ENST00000504020 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
CCDC110-203ENST00000504020 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
CCDC110-203ENST00000504020 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
CCDC110-203ENST00000504020 PCDH10Q9P2E7 1040 aa9.36□□□□□ -0.91
CCDC110-203ENST00000504020 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
CCDC110-203ENST00000504020 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
CCDC110-203ENST00000504020 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
CCDC110-203ENST00000504020 C9orf84Q5VXU9 1444 aa9.34□□□□□ -0.91
CCDC110-203ENST00000504020 GABBR2O75899 941 aa9.34□□□□□ -0.91
CCDC110-203ENST00000504020 ATP10AO60312 1499 aa9.34□□□□□ -0.91
CCDC110-203ENST00000504020 ZNF772Q68DY9 489 aaPredicted RBP9.33□□□□□ -0.92
CCDC110-203ENST00000504020 POLR1AO95602 1720 aaPredicted RBP9.32□□□□□ -0.92
CCDC110-203ENST00000504020 RXRBP28702 533 aa9.32□□□□□ -0.92
CCDC110-203ENST00000504020 VWDEQ8N2E2 1590 aa9.32□□□□□ -0.92
CCDC110-203ENST00000504020 CEP350Q5VT06 3117 aa9.31□□□□□ -0.92
CCDC110-203ENST00000504020 ABCA8O94911 1581 aa9.3□□□□□ -0.92
CCDC110-203ENST00000504020 CFAP74Q9C0B2 1584 aa9.3□□□□□ -0.92
CCDC110-203ENST00000504020 NPATQ14207 1427 aa9.3□□□□□ -0.92
CCDC110-203ENST00000504020 C19orf67A6NJJ6 358 aa9.29□□□□□ -0.92
CCDC110-203ENST00000504020 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
CCDC110-203ENST00000504020 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
CCDC110-203ENST00000504020 STRCP1A6NGW2 1772 aa9.28□□□□□ -0.92
CCDC110-203ENST00000504020 CEP170BQ9Y4F5 1589 aaPredicted RBP9.28□□□□□ -0.92
CCDC110-203ENST00000504020 FAM135BQ49AJ0 1406 aa9.27□□□□□ -0.93
CCDC110-203ENST00000504020 SYNMO15061 1565 aa9.27□□□□□ -0.93
CCDC110-203ENST00000504020 NEURL4Q96JN8 1562 aa9.27□□□□□ -0.93
CCDC110-203ENST00000504020 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms