RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 TROQ12816 1431 aaPredicted RBP26.62■■□□□ 1.85
LPCAT1-203ENST00000503252 DENND4BO75064 1496 aaPredicted RBP26.62■■□□□ 1.85
LPCAT1-203ENST00000503252 HIRIP3Q9BW71 556 aaPredicted RBP26.62■■□□□ 1.85
LPCAT1-203ENST00000503252 ABCC5O15440 1437 aa26.6■■□□□ 1.85
LPCAT1-203ENST00000503252 DNMT1P26358 1616 aaKnown RBP26.58■■□□□ 1.85
LPCAT1-203ENST00000503252 DDX10Q13206 875 aaKnown RBP26.58■■□□□ 1.85
LPCAT1-203ENST00000503252 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
LPCAT1-203ENST00000503252 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
LPCAT1-203ENST00000503252 KIF14Q15058 1648 aa26.53■■□□□ 1.84
LPCAT1-203ENST00000503252 KDM5BQ9UGL1 1544 aa26.53■■□□□ 1.84
LPCAT1-203ENST00000503252 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
LPCAT1-203ENST00000503252 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
LPCAT1-203ENST00000503252 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
LPCAT1-203ENST00000503252 ADCY10Q96PN6 1610 aa26.49■■□□□ 1.83
LPCAT1-203ENST00000503252 ABCA8O94911 1581 aa26.49■■□□□ 1.83
LPCAT1-203ENST00000503252 FOXD1Q16676 465 aa26.48■■□□□ 1.83
LPCAT1-203ENST00000503252 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
LPCAT1-203ENST00000503252 ZNF777Q9ULD5 760 aaPredicted RBP26.46■■□□□ 1.83
LPCAT1-203ENST00000503252 KCNH8Q96L42 1107 aa26.46■■□□□ 1.83
LPCAT1-203ENST00000503252 ATP10BO94823 1461 aa26.44■■□□□ 1.82
LPCAT1-203ENST00000503252 PLEKHD1A6NEE1 506 aa26.42■■□□□ 1.82
LPCAT1-203ENST00000503252 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
LPCAT1-203ENST00000503252 ANKRD30BQ9BXX2 1392 aa26.36■■□□□ 1.81
LPCAT1-203ENST00000503252 PTPRGP23470 1445 aa26.36■■□□□ 1.81
LPCAT1-203ENST00000503252 SLC4A1APQ9BWU0 796 aaKnown RBP26.35■■□□□ 1.81
LPCAT1-203ENST00000503252 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
LPCAT1-203ENST00000503252 CHD1O14646 1710 aa26.34■■□□□ 1.81
LPCAT1-203ENST00000503252 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
LPCAT1-203ENST00000503252 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
LPCAT1-203ENST00000503252 ADGBQ8N7X0 1667 aa26.33■■□□□ 1.81
LPCAT1-203ENST00000503252 CROCC2H7BZ55 1655 aa26.32■■□□□ 1.8
LPCAT1-203ENST00000503252 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
LPCAT1-203ENST00000503252 PZPP20742 1482 aa26.28■■□□□ 1.8
LPCAT1-203ENST00000503252 RPRD2Q5VT52 1461 aaKnown RBP26.28■■□□□ 1.8
LPCAT1-203ENST00000503252 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
LPCAT1-203ENST00000503252 HSPA5P11021 654 aaKnown RBP26.26■■□□□ 1.79
LPCAT1-203ENST00000503252 ANP32CO43423 234 aa26.24■■□□□ 1.79
LPCAT1-203ENST00000503252 TEX14Q8IWB6 1497 aa26.22■■□□□ 1.79
LPCAT1-203ENST00000503252 ANKRD50Q9ULJ7 1429 aa26.2■■□□□ 1.78
LPCAT1-203ENST00000503252 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
LPCAT1-203ENST00000503252 SHROOM2Q13796 1616 aa26.19■■□□□ 1.78
LPCAT1-203ENST00000503252 EIF4G2P78344 907 aaKnown RBP eCLIP26.19■■□□□ 1.78
LPCAT1-203ENST00000503252 NBPF8Q3BBV2 869 aa26.19■■□□□ 1.78
LPCAT1-203ENST00000503252 CCER2I3L3R5 266 aa26.18■■□□□ 1.78
LPCAT1-203ENST00000503252 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
LPCAT1-203ENST00000503252 HNRNPMP52272 730 aaKnown RBP eCLIP26.17■■□□□ 1.78
LPCAT1-203ENST00000503252 WASHC2AQ641Q2 1341 aa26.17■■□□□ 1.78
LPCAT1-203ENST00000503252 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
LPCAT1-203ENST00000503252 KIAA1107Q9UPP5 1409 aa26.15■■□□□ 1.78
LPCAT1-203ENST00000503252 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
LPCAT1-203ENST00000503252 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
LPCAT1-203ENST00000503252 PKD2Q13563 968 aa26.14■■□□□ 1.77
LPCAT1-203ENST00000503252 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
LPCAT1-203ENST00000503252 CDC42BPBQ9Y5S2 1711 aa26.1■■□□□ 1.77
LPCAT1-203ENST00000503252 ARHGEF5Q12774 1597 aa26.09■■□□□ 1.77
LPCAT1-203ENST00000503252 SAMD9LQ8IVG5 1584 aa26.09■■□□□ 1.77
LPCAT1-203ENST00000503252 PREX2Q70Z35 1606 aa26.08■■□□□ 1.77
LPCAT1-203ENST00000503252 NUP155O75694 1391 aa26.08■■□□□ 1.77
LPCAT1-203ENST00000503252 KIF15Q9NS87 1388 aa26.07■■□□□ 1.76
LPCAT1-203ENST00000503252 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
LPCAT1-203ENST00000503252 ABCC2Q92887 1545 aa26.04■■□□□ 1.76
LPCAT1-203ENST00000503252 TTC37Q6PGP7 1564 aa26.03■■□□□ 1.76
LPCAT1-203ENST00000503252 CCDC141Q6ZP82 1450 aa26.03■■□□□ 1.76
LPCAT1-203ENST00000503252 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
LPCAT1-203ENST00000503252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.01■■□□□ 1.75
LPCAT1-203ENST00000503252 SPATA31E1Q6ZUB1 1445 aa26■■□□□ 1.75
LPCAT1-203ENST00000503252 CCDC7Q96M83 1385 aa25.99■■□□□ 1.75
LPCAT1-203ENST00000503252 ARHGAP5Q13017 1502 aa25.99■■□□□ 1.75
LPCAT1-203ENST00000503252 KDM5DQ9BY66 1539 aa25.99■■□□□ 1.75
LPCAT1-203ENST00000503252 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
LPCAT1-203ENST00000503252 RSPH4AQ5TD94 716 aa25.97■■□□□ 1.75
LPCAT1-203ENST00000503252 CNTLNQ9NXG0 1405 aa25.96■■□□□ 1.75
LPCAT1-203ENST00000503252 ERICH6Q7L0X2 663 aa25.96■■□□□ 1.75
LPCAT1-203ENST00000503252 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
LPCAT1-203ENST00000503252 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
LPCAT1-203ENST00000503252 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
LPCAT1-203ENST00000503252 MYO5CQ9NQX4 1742 aa25.9■■□□□ 1.74
LPCAT1-203ENST00000503252 ZCCHC11Q5TAX3 1644 aaKnown RBP25.88■■□□□ 1.73
LPCAT1-203ENST00000503252 FAM135AQ9P2D6 1515 aa25.86■■□□□ 1.73
LPCAT1-203ENST00000503252 MAST1Q9Y2H9 1570 aa25.86■■□□□ 1.73
LPCAT1-203ENST00000503252 USP47Q96K76 1375 aa25.85■■□□□ 1.73
LPCAT1-203ENST00000503252 UHRF1BP1LA0JNW5 1464 aa25.84■■□□□ 1.73
LPCAT1-203ENST00000503252 POLR1AO95602 1720 aaPredicted RBP25.83■■□□□ 1.73
LPCAT1-203ENST00000503252 UHRF1BP1Q6BDS2 1440 aa25.83■■□□□ 1.73
LPCAT1-203ENST00000503252 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
LPCAT1-203ENST00000503252 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
LPCAT1-203ENST00000503252 PLCH2O75038 1416 aa25.81■■□□□ 1.72
LPCAT1-203ENST00000503252 PRKRIP1Q9H875 184 aaPredicted RBP25.81■■□□□ 1.72
LPCAT1-203ENST00000503252 KDM2AQ9Y2K7 1162 aa25.8■■□□□ 1.72
LPCAT1-203ENST00000503252 CCDC184Q52MB2 194 aa25.8■■□□□ 1.72
LPCAT1-203ENST00000503252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.79■■□□□ 1.721e-9■□□□□ 9.2
LPCAT1-203ENST00000503252 ANP32EQ9BTT0 268 aa25.79■■□□□ 1.72
LPCAT1-203ENST00000503252 RALGAPBQ86X10 1494 aa25.78■■□□□ 1.72
LPCAT1-203ENST00000503252 KDM5CP41229 1560 aa25.78■■□□□ 1.72
LPCAT1-203ENST00000503252 BCORL1Q5H9F3 1711 aa25.78■■□□□ 1.72
LPCAT1-203ENST00000503252 PLXNC1O60486 1568 aa25.77■■□□□ 1.72
LPCAT1-203ENST00000503252 UNC13BO14795 1591 aa25.77■■□□□ 1.72
LPCAT1-203ENST00000503252 DCAF11Q8TEB1 546 aa25.77■■□□□ 1.72
LPCAT1-203ENST00000503252 EFCAB2Q5VUJ9 269 aa25.76■■□□□ 1.71
LPCAT1-203ENST00000503252 HNRNPUQ00839 825 aaKnown RBP eCLIP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms