RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 UACAQ9BZF9 1416 aa16.77■□□□□ 0.28
USP46-204ENST00000503060 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
USP46-204ENST00000503060 ADCY10Q96PN6 1610 aa16.76■□□□□ 0.27
USP46-204ENST00000503060 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
USP46-204ENST00000503060 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
USP46-204ENST00000503060 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
USP46-204ENST00000503060 KIF14Q15058 1648 aa16.72■□□□□ 0.27
USP46-204ENST00000503060 ATP10BO94823 1461 aa16.72■□□□□ 0.27
USP46-204ENST00000503060 SHROOM2Q13796 1616 aa16.72■□□□□ 0.27
USP46-204ENST00000503060 PTPRGP23470 1445 aa16.72■□□□□ 0.27
USP46-204ENST00000503060 DNMT1P26358 1616 aaKnown RBP16.72■□□□□ 0.27
USP46-204ENST00000503060 DAPK1P53355 1430 aa16.71■□□□□ 0.27
USP46-204ENST00000503060 ITSN2Q9NZM3 1697 aa16.71■□□□□ 0.27
USP46-204ENST00000503060 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
USP46-204ENST00000503060 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
USP46-204ENST00000503060 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
USP46-204ENST00000503060 ABCC5O15440 1437 aa16.7■□□□□ 0.26
USP46-204ENST00000503060 ZNF644Q9H582 1327 aaPredicted RBP16.69■□□□□ 0.26
USP46-204ENST00000503060 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
USP46-204ENST00000503060 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
USP46-204ENST00000503060 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
USP46-204ENST00000503060 KDM6BO15054 1643 aa16.67■□□□□ 0.26
USP46-204ENST00000503060 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
USP46-204ENST00000503060 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
USP46-204ENST00000503060 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
USP46-204ENST00000503060 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
USP46-204ENST00000503060 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
USP46-204ENST00000503060 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
USP46-204ENST00000503060 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
USP46-204ENST00000503060 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
USP46-204ENST00000503060 MIER1Q8N108 512 aa16.6■□□□□ 0.25
USP46-204ENST00000503060 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
USP46-204ENST00000503060 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
USP46-204ENST00000503060 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
USP46-204ENST00000503060 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
USP46-204ENST00000503060 CROCC2H7BZ55 1655 aa16.58■□□□□ 0.24
USP46-204ENST00000503060 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
USP46-204ENST00000503060 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
USP46-204ENST00000503060 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
USP46-204ENST00000503060 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
USP46-204ENST00000503060 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.23
USP46-204ENST00000503060 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
USP46-204ENST00000503060 KDM5BQ9UGL1 1544 aa16.5■□□□□ 0.23
USP46-204ENST00000503060 PREX2Q70Z35 1606 aa16.5■□□□□ 0.23
USP46-204ENST00000503060 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
USP46-204ENST00000503060 UHRF1BP1LA0JNW5 1464 aa16.48■□□□□ 0.23
USP46-204ENST00000503060 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
USP46-204ENST00000503060 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
USP46-204ENST00000503060 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
USP46-204ENST00000503060 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
USP46-204ENST00000503060 BCANQ96GW7 911 aa16.47■□□□□ 0.23
USP46-204ENST00000503060 SAMD9LQ8IVG5 1584 aa16.46■□□□□ 0.23
USP46-204ENST00000503060 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
USP46-204ENST00000503060 ANKRD30BQ9BXX2 1392 aa16.46■□□□□ 0.23
USP46-204ENST00000503060 TTC37Q6PGP7 1564 aa16.46■□□□□ 0.23
USP46-204ENST00000503060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.46■□□□□ 0.23
USP46-204ENST00000503060 PZPP20742 1482 aa16.46■□□□□ 0.23
USP46-204ENST00000503060 FOXD1Q16676 465 aa16.45■□□□□ 0.22
USP46-204ENST00000503060 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
USP46-204ENST00000503060 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
USP46-204ENST00000503060 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
USP46-204ENST00000503060 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
USP46-204ENST00000503060 HNRNPMP52272 730 aaKnown RBP eCLIP16.44■□□□□ 0.221e-7■■■□□ 14.8
USP46-204ENST00000503060 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
USP46-204ENST00000503060 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
USP46-204ENST00000503060 RPRD2Q5VT52 1461 aaKnown RBP16.42■□□□□ 0.22
USP46-204ENST00000503060 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
USP46-204ENST00000503060 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
USP46-204ENST00000503060 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
USP46-204ENST00000503060 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
USP46-204ENST00000503060 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
USP46-204ENST00000503060 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
USP46-204ENST00000503060 SYCP2Q9BX26 1530 aa16.38■□□□□ 0.21
USP46-204ENST00000503060 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
USP46-204ENST00000503060 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
USP46-204ENST00000503060 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
USP46-204ENST00000503060 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
USP46-204ENST00000503060 HIRIP3Q9BW71 556 aaPredicted RBP16.37■□□□□ 0.21
USP46-204ENST00000503060 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
USP46-204ENST00000503060 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
USP46-204ENST00000503060 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
USP46-204ENST00000503060 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
USP46-204ENST00000503060 TEX14Q8IWB6 1497 aa16.35■□□□□ 0.21
USP46-204ENST00000503060 PLCH2O75038 1416 aa16.35■□□□□ 0.21
USP46-204ENST00000503060 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
USP46-204ENST00000503060 PKD2Q13563 968 aa16.34■□□□□ 0.21
USP46-204ENST00000503060 NUP155O75694 1391 aa16.34■□□□□ 0.21
USP46-204ENST00000503060 ARHGEF12Q9NZN5 1544 aa16.3■□□□□ 0.2
USP46-204ENST00000503060 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
USP46-204ENST00000503060 PLXNC1O60486 1568 aa16.29■□□□□ 0.2
USP46-204ENST00000503060 WDR7Q9Y4E6 1490 aa16.28■□□□□ 0.2
USP46-204ENST00000503060 ABCC1P33527 1531 aa16.27■□□□□ 0.2
USP46-204ENST00000503060 ARAP3Q8WWN8 1544 aa16.27■□□□□ 0.2
USP46-204ENST00000503060 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.19
USP46-204ENST00000503060 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.19
USP46-204ENST00000503060 OSCARQ8IYS5 282 aa16.27■□□□□ 0.19
USP46-204ENST00000503060 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.19
USP46-204ENST00000503060 UNC13BO14795 1591 aa16.25■□□□□ 0.19
USP46-204ENST00000503060 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
USP46-204ENST00000503060 DUOX2Q9NRD8 1548 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms