RNA–Protein interactions for RNA: ENST00000502798.6

SV2C-202, Transcript of synaptic vesicle glycoprotein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2C, Length 11,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2C-202ENST00000502798 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SV2C-202ENST00000502798 MIER1Q8N108 512 aa12.67□□□□□ -0.38
SV2C-202ENST00000502798 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
SV2C-202ENST00000502798 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SV2C-202ENST00000502798 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
SV2C-202ENST00000502798 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
SV2C-202ENST00000502798 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
SV2C-202ENST00000502798 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
SV2C-202ENST00000502798 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
SV2C-202ENST00000502798 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
SV2C-202ENST00000502798 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
SV2C-202ENST00000502798 TAF7LQ5H9L4 462 aa12.64□□□□□ -0.39
SV2C-202ENST00000502798 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
SV2C-202ENST00000502798 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
SV2C-202ENST00000502798 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
SV2C-202ENST00000502798 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
SV2C-202ENST00000502798 PES1O00541 588 aaKnown RBP12.62□□□□□ -0.39
SV2C-202ENST00000502798 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
SV2C-202ENST00000502798 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
SV2C-202ENST00000502798 MLECQ14165 292 aa12.61□□□□□ -0.39
SV2C-202ENST00000502798 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
SV2C-202ENST00000502798 MARCH6O60337 910 aa12.6□□□□□ -0.39
SV2C-202ENST00000502798 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
SV2C-202ENST00000502798 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
SV2C-202ENST00000502798 GZF1Q9H116 711 aaPredicted RBP12.6□□□□□ -0.39
SV2C-202ENST00000502798 FRAT2O75474 233 aaPredicted RBP12.6□□□□□ -0.39
SV2C-202ENST00000502798 GBP4Q96PP9 640 aa12.6□□□□□ -0.39
SV2C-202ENST00000502798 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
SV2C-202ENST00000502798 TPM3P06753 285 aa12.59□□□□□ -0.39
SV2C-202ENST00000502798 SETQ01105 290 aaPredicted RBP12.59□□□□□ -0.39
SV2C-202ENST00000502798 KANK1Q14678 1352 aa12.58□□□□□ -0.4
SV2C-202ENST00000502798 PTMSP20962 102 aa12.57□□□□□ -0.4
SV2C-202ENST00000502798 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
SV2C-202ENST00000502798 PATL2C9JE40 543 aaKnown RBP12.57□□□□□ -0.4
SV2C-202ENST00000502798 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SV2C-202ENST00000502798 B4GALNT3Q6L9W6 998 aa12.56□□□□□ -0.4
SV2C-202ENST00000502798 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
SV2C-202ENST00000502798 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
SV2C-202ENST00000502798 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
SV2C-202ENST00000502798 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
SV2C-202ENST00000502798 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SV2C-202ENST00000502798 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
SV2C-202ENST00000502798 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
SV2C-202ENST00000502798 CLIP1P30622 1438 aa12.53□□□□□ -0.4
SV2C-202ENST00000502798 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
SV2C-202ENST00000502798 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
SV2C-202ENST00000502798 TMF1P82094 1093 aa12.53□□□□□ -0.4
SV2C-202ENST00000502798 ITPRIPQ8IWB1 547 aa12.52□□□□□ -0.41
SV2C-202ENST00000502798 STK26Q9P289 416 aa12.52□□□□□ -0.41
SV2C-202ENST00000502798 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
SV2C-202ENST00000502798 PHF14O94880 888 aa12.51□□□□□ -0.41
SV2C-202ENST00000502798 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
SV2C-202ENST00000502798 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
SV2C-202ENST00000502798 RAD21O60216 631 aa12.5□□□□□ -0.41
SV2C-202ENST00000502798 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
SV2C-202ENST00000502798 TRIM34Q9BYJ4 488 aa12.49□□□□□ -0.41
SV2C-202ENST00000502798 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
SV2C-202ENST00000502798 CCDC70Q6NSX1 233 aa12.49□□□□□ -0.41
SV2C-202ENST00000502798 SF3A1Q15459 793 aaKnown RBP12.49□□□□□ -0.41
SV2C-202ENST00000502798 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
SV2C-202ENST00000502798 TPM2P07951 284 aa12.48□□□□□ -0.41
SV2C-202ENST00000502798 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
SV2C-202ENST00000502798 CTDP1Q9Y5B0 961 aaPredicted RBP12.48□□□□□ -0.41
SV2C-202ENST00000502798 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
SV2C-202ENST00000502798 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
SV2C-202ENST00000502798 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
SV2C-202ENST00000502798 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
SV2C-202ENST00000502798 NOL8Q76FK4 1167 aaKnown RBP12.47□□□□□ -0.41
SV2C-202ENST00000502798 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
SV2C-202ENST00000502798 KIF3AQ9Y496 699 aa12.46□□□□□ -0.41
SV2C-202ENST00000502798 TPM1P09493 284 aa12.46□□□□□ -0.42
SV2C-202ENST00000502798 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.42
SV2C-202ENST00000502798 AKAP17AQ02040 695 aaKnown RBP12.45□□□□□ -0.42
SV2C-202ENST00000502798 H3BQV1 296 aa12.45□□□□□ -0.42
SV2C-202ENST00000502798 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
SV2C-202ENST00000502798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.42
SV2C-202ENST00000502798 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
SV2C-202ENST00000502798 MSH5O43196 834 aa12.45□□□□□ -0.42
SV2C-202ENST00000502798 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
SV2C-202ENST00000502798 SLC4A10Q6U841 1118 aa12.44□□□□□ -0.42
SV2C-202ENST00000502798 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
SV2C-202ENST00000502798 HMMRO75330 724 aa12.43□□□□□ -0.42
SV2C-202ENST00000502798 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
SV2C-202ENST00000502798 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
SV2C-202ENST00000502798 GOLGA6L19H0YKK7 550 aa12.42□□□□□ -0.42
SV2C-202ENST00000502798 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
SV2C-202ENST00000502798 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
SV2C-202ENST00000502798 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
SV2C-202ENST00000502798 RWDD1Q9H446 243 aaPredicted RBP12.41□□□□□ -0.42
SV2C-202ENST00000502798 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
SV2C-202ENST00000502798 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
SV2C-202ENST00000502798 GPS2Q13227 327 aa12.4□□□□□ -0.42
SV2C-202ENST00000502798 ODF2Q5BJF6 829 aa12.4□□□□□ -0.42
SV2C-202ENST00000502798 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.43
SV2C-202ENST00000502798 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.43
SV2C-202ENST00000502798 ST18O60284 1047 aa12.39□□□□□ -0.43
SV2C-202ENST00000502798 GOLGA6L3A6NEY3 463 aa12.39□□□□□ -0.43
SV2C-202ENST00000502798 IPO7O95373 1038 aaKnown RBP12.39□□□□□ -0.43
SV2C-202ENST00000502798 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
SV2C-202ENST00000502798 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms