RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 DPY19L2Q6NUT2 758 aa14.82□□□□□ -0.04
CRNDE-202ENST00000502066 C3orf67Q6ZVT6 689 aa14.82□□□□□ -0.04
CRNDE-202ENST00000502066 MARVELD3Q96A59 401 aa14.82□□□□□ -0.04
CRNDE-202ENST00000502066 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
CRNDE-202ENST00000502066 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
CRNDE-202ENST00000502066 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
CRNDE-202ENST00000502066 WDR62O43379 1518 aa14.79□□□□□ -0.04
CRNDE-202ENST00000502066 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
CRNDE-202ENST00000502066 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
CRNDE-202ENST00000502066 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
CRNDE-202ENST00000502066 SNPHO15079 494 aa14.78□□□□□ -0.04
CRNDE-202ENST00000502066 TMEM121BQ9BXQ6 578 aaPredicted RBP14.72□□□□□ -0.05
CRNDE-202ENST00000502066 BOLA1Q9Y3E2 137 aa14.64□□□□□ -0.07
CRNDE-202ENST00000502066 EMP3P54852 163 aa14.63□□□□□ -0.07
CRNDE-202ENST00000502066 G3V3G9 751 aa14.61□□□□□ -0.07
CRNDE-202ENST00000502066 EFCAB3Q8N7B9 438 aa14.61□□□□□ -0.07
CRNDE-202ENST00000502066 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
CRNDE-202ENST00000502066 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
CRNDE-202ENST00000502066 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
CRNDE-202ENST00000502066 POTEBQ6S5H4 581 aa14.58□□□□□ -0.08
CRNDE-202ENST00000502066 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
CRNDE-202ENST00000502066 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
CRNDE-202ENST00000502066 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
CRNDE-202ENST00000502066 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
CRNDE-202ENST00000502066 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
CRNDE-202ENST00000502066 HS3ST6Q96QI5 342 aa14.52□□□□□ -0.09
CRNDE-202ENST00000502066 HOXB3P14651 431 aaPredicted RBP14.51□□□□□ -0.09
CRNDE-202ENST00000502066 RNF25Q96BH1 459 aaPredicted RBP14.5□□□□□ -0.09
CRNDE-202ENST00000502066 SPATA31D1Q6ZQQ2 1576 aa14.5□□□□□ -0.09
CRNDE-202ENST00000502066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
CRNDE-202ENST00000502066 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
CRNDE-202ENST00000502066 ZFP91Q96JP5 570 aaPredicted RBP14.46□□□□□ -0.09
CRNDE-202ENST00000502066 KRTAP3-3Q9BYR6 98 aa14.45□□□□□ -0.1
CRNDE-202ENST00000502066 KRTAP3-2Q9BYR7 98 aa14.45□□□□□ -0.1
CRNDE-202ENST00000502066 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
CRNDE-202ENST00000502066 CHD1O14646 1710 aa14.43□□□□□ -0.1
CRNDE-202ENST00000502066 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
CRNDE-202ENST00000502066 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
CRNDE-202ENST00000502066 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
CRNDE-202ENST00000502066 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
CRNDE-202ENST00000502066 ADGRL1O94910 1474 aa14.39□□□□□ -0.11
CRNDE-202ENST00000502066 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
CRNDE-202ENST00000502066 KIF13AQ9H1H9 1805 aa14.37□□□□□ -0.11
CRNDE-202ENST00000502066 VGFO15240 615 aaPredicted RBP14.37□□□□□ -0.11
CRNDE-202ENST00000502066 DOK7Q18PE1 504 aa14.37□□□□□ -0.11
CRNDE-202ENST00000502066 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
CRNDE-202ENST00000502066 SOX12O15370 315 aa14.36□□□□□ -0.11
CRNDE-202ENST00000502066 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
CRNDE-202ENST00000502066 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
CRNDE-202ENST00000502066 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
CRNDE-202ENST00000502066 ERBB3P21860 1342 aa14.33□□□□□ -0.12
CRNDE-202ENST00000502066 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
CRNDE-202ENST00000502066 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
CRNDE-202ENST00000502066 KDM6BO15054 1643 aa14.28□□□□□ -0.12
CRNDE-202ENST00000502066 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
CRNDE-202ENST00000502066 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
CRNDE-202ENST00000502066 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
CRNDE-202ENST00000502066 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
CRNDE-202ENST00000502066 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
CRNDE-202ENST00000502066 GAPVD1Q14C86 1478 aa14.21□□□□□ -0.13
CRNDE-202ENST00000502066 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
CRNDE-202ENST00000502066 NLRP6P59044 892 aa14.2□□□□□ -0.14
CRNDE-202ENST00000502066 GPR153Q6NV75 609 aa14.2□□□□□ -0.14
CRNDE-202ENST00000502066 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
CRNDE-202ENST00000502066 ARSIQ5FYB1 569 aa14.18□□□□□ -0.14
CRNDE-202ENST00000502066 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.142e-10■■□□□ 11.6
CRNDE-202ENST00000502066 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
CRNDE-202ENST00000502066 STK25O00506 426 aa14.16□□□□□ -0.14
CRNDE-202ENST00000502066 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
CRNDE-202ENST00000502066 MFRPQ9BY79 579 aa14.16□□□□□ -0.14
CRNDE-202ENST00000502066 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
CRNDE-202ENST00000502066 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
CRNDE-202ENST00000502066 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
CRNDE-202ENST00000502066 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
CRNDE-202ENST00000502066 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
CRNDE-202ENST00000502066 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
CRNDE-202ENST00000502066 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
CRNDE-202ENST00000502066 ZNF687Q8N1G0 1237 aa14.09□□□□□ -0.15
CRNDE-202ENST00000502066 RGL2O15211 777 aa14.08□□□□□ -0.16
CRNDE-202ENST00000502066 PKD2Q13563 968 aa14.06□□□□□ -0.16
CRNDE-202ENST00000502066 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
CRNDE-202ENST00000502066 RNF166Q96A37 237 aaPredicted RBP14.04□□□□□ -0.16
CRNDE-202ENST00000502066 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.172e-8■■■■□ 22.7
CRNDE-202ENST00000502066 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
CRNDE-202ENST00000502066 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
CRNDE-202ENST00000502066 TSPOAP1O95153 1857 aa14□□□□□ -0.17
CRNDE-202ENST00000502066 KIF3CO14782 793 aa14□□□□□ -0.17
CRNDE-202ENST00000502066 ANKRD13DQ6ZTN6 518 aa14□□□□□ -0.17
CRNDE-202ENST00000502066 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
CRNDE-202ENST00000502066 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
CRNDE-202ENST00000502066 NUDT7P0C024 238 aa13.98□□□□□ -0.17
CRNDE-202ENST00000502066 PPP1R37O75864 691 aa13.96□□□□□ -0.17
CRNDE-202ENST00000502066 TMC2Q8TDI7 906 aa13.91□□□□□ -0.18
CRNDE-202ENST00000502066 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
CRNDE-202ENST00000502066 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
CRNDE-202ENST00000502066 PCDHGA4Q9Y5G9 962 aa13.9□□□□□ -0.18
CRNDE-202ENST00000502066 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
CRNDE-202ENST00000502066 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
CRNDE-202ENST00000502066 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
CRNDE-202ENST00000502066 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms