RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 ROCK1Q13464 1354 aa27.17■■□□□ 1.94
PLXND1-202ENST00000501038 UHRF1BP1LA0JNW5 1464 aa27.17■■□□□ 1.94
PLXND1-202ENST00000501038 CROCC2H7BZ55 1655 aa27.16■■□□□ 1.94
PLXND1-202ENST00000501038 RRP7BPQ9NSQ0 103 aa27.16■■□□□ 1.94
PLXND1-202ENST00000501038 ADGBQ8N7X0 1667 aa27.14■■□□□ 1.94
PLXND1-202ENST00000501038 ZNF316A6NFI3 1004 aaPredicted RBP27.13■■□□□ 1.93
PLXND1-202ENST00000501038 KDM6BO15054 1643 aa27.11■■□□□ 1.93
PLXND1-202ENST00000501038 ZCCHC11Q5TAX3 1644 aaKnown RBP27.11■■□□□ 1.93
PLXND1-202ENST00000501038 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
PLXND1-202ENST00000501038 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
PLXND1-202ENST00000501038 ZNF777Q9ULD5 760 aaPredicted RBP27.06■■□□□ 1.92
PLXND1-202ENST00000501038 KDM5BQ9UGL1 1544 aa27.06■■□□□ 1.92
PLXND1-202ENST00000501038 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
PLXND1-202ENST00000501038 ACIN1Q9UKV3 1341 aaKnown RBP27.03■■□□□ 1.92
PLXND1-202ENST00000501038 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
PLXND1-202ENST00000501038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.02■■□□□ 1.92
PLXND1-202ENST00000501038 MYO5CQ9NQX4 1742 aa27■■□□□ 1.91
PLXND1-202ENST00000501038 ARHGEF5Q12774 1597 aa27■■□□□ 1.91
PLXND1-202ENST00000501038 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
PLXND1-202ENST00000501038 SHANK2Q9UPX8 1470 aa26.99■■□□□ 1.91
PLXND1-202ENST00000501038 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
PLXND1-202ENST00000501038 SAMD9LQ8IVG5 1584 aa26.98■■□□□ 1.91
PLXND1-202ENST00000501038 NCOA1Q15788 1441 aa26.96■■□□□ 1.91
PLXND1-202ENST00000501038 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
PLXND1-202ENST00000501038 NEUROD1Q13562 356 aa26.95■■□□□ 1.91
PLXND1-202ENST00000501038 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.91
PLXND1-202ENST00000501038 TRIM52Q96A61 297 aa26.94■■□□□ 1.9
PLXND1-202ENST00000501038 ANKRD30AQ9BXX3 1397 aa26.93■■□□□ 1.9
PLXND1-202ENST00000501038 ARHGAP5Q13017 1502 aa26.92■■□□□ 1.9
PLXND1-202ENST00000501038 DENND4BO75064 1496 aaPredicted RBP26.91■■□□□ 1.9
PLXND1-202ENST00000501038 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
PLXND1-202ENST00000501038 MBD5Q9P267 1494 aa26.9■■□□□ 1.9
PLXND1-202ENST00000501038 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
PLXND1-202ENST00000501038 KCNH8Q96L42 1107 aa26.85■■□□□ 1.89
PLXND1-202ENST00000501038 MPHOSPH9Q99550 1183 aa26.85■■□□□ 1.89
PLXND1-202ENST00000501038 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
PLXND1-202ENST00000501038 HNRNPMP52272 730 aaKnown RBP eCLIP26.84■■□□□ 1.89
PLXND1-202ENST00000501038 SYCP2Q9BX26 1530 aa26.83■■□□□ 1.89
PLXND1-202ENST00000501038 TSPY4P0CV99 314 aa26.83■■□□□ 1.88
PLXND1-202ENST00000501038 TSPY10P0CW01 314 aa26.83■■□□□ 1.88
PLXND1-202ENST00000501038 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.88
PLXND1-202ENST00000501038 PLCH2O75038 1416 aa26.82■■□□□ 1.88
PLXND1-202ENST00000501038 MAST1Q9Y2H9 1570 aa26.82■■□□□ 1.88
PLXND1-202ENST00000501038 TONSLQ96HA7 1378 aa26.81■■□□□ 1.88
PLXND1-202ENST00000501038 WDR7Q9Y4E6 1490 aa26.8■■□□□ 1.88
PLXND1-202ENST00000501038 ANKRD50Q9ULJ7 1429 aa26.79■■□□□ 1.88
PLXND1-202ENST00000501038 KIAA1107Q9UPP5 1409 aa26.79■■□□□ 1.88
PLXND1-202ENST00000501038 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
PLXND1-202ENST00000501038 ARAP3Q8WWN8 1544 aa26.77■■□□□ 1.88
PLXND1-202ENST00000501038 PZPP20742 1482 aa26.77■■□□□ 1.88
PLXND1-202ENST00000501038 KIF15Q9NS87 1388 aa26.73■■□□□ 1.87
PLXND1-202ENST00000501038 ABCC1P33527 1531 aa26.72■■□□□ 1.87
PLXND1-202ENST00000501038 ABCA9Q8IUA7 1624 aa26.72■■□□□ 1.87
PLXND1-202ENST00000501038 EFCAB2Q5VUJ9 269 aa26.72■■□□□ 1.87
PLXND1-202ENST00000501038 SLC4A1APQ9BWU0 796 aaKnown RBP26.71■■□□□ 1.87
PLXND1-202ENST00000501038 PLXNC1O60486 1568 aa26.7■■□□□ 1.87
PLXND1-202ENST00000501038 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.86
PLXND1-202ENST00000501038 ANKRD30BQ9BXX2 1392 aa26.69■■□□□ 1.86
PLXND1-202ENST00000501038 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
PLXND1-202ENST00000501038 ASXL2Q76L83 1435 aa26.68■■□□□ 1.86
PLXND1-202ENST00000501038 FOXD1Q16676 465 aa26.65■■□□□ 1.86
PLXND1-202ENST00000501038 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
PLXND1-202ENST00000501038 NPM1P06748 294 aaKnown RBP eCLIP26.61■■□□□ 1.85
PLXND1-202ENST00000501038 NUP155O75694 1391 aa26.58■■□□□ 1.85
PLXND1-202ENST00000501038 UNC13BO14795 1591 aa26.58■■□□□ 1.85
PLXND1-202ENST00000501038 DUOX2Q9NRD8 1548 aa26.57■■□□□ 1.84
PLXND1-202ENST00000501038 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
PLXND1-202ENST00000501038 FANCAO15360 1455 aa26.55■■□□□ 1.84
PLXND1-202ENST00000501038 PKD2Q13563 968 aa26.54■■□□□ 1.84
PLXND1-202ENST00000501038 TEX14Q8IWB6 1497 aa26.52■■□□□ 1.84
PLXND1-202ENST00000501038 FAM135AQ9P2D6 1515 aa26.5■■□□□ 1.83
PLXND1-202ENST00000501038 RTEL1-TNFRSF6BF6WH68 1400 aa26.49■■□□□ 1.83
PLXND1-202ENST00000501038 ERBINQ96RT1 1412 aa26.49■■□□□ 1.83
PLXND1-202ENST00000501038 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
PLXND1-202ENST00000501038 ZFYVE16Q7Z3T8 1539 aa26.48■■□□□ 1.83
PLXND1-202ENST00000501038 MIER1Q8N108 512 aa26.47■■□□□ 1.83
PLXND1-202ENST00000501038 IQGAP3Q86VI3 1631 aa26.47■■□□□ 1.83
PLXND1-202ENST00000501038 ADGRL1O94910 1474 aa26.46■■□□□ 1.83
PLXND1-202ENST00000501038 CFAP74Q9C0B2 1584 aa26.45■■□□□ 1.83
PLXND1-202ENST00000501038 INO80Q9ULG1 1556 aaPredicted RBP26.45■■□□□ 1.83
PLXND1-202ENST00000501038 SPAG9O60271 1321 aaKnown RBP26.45■■□□□ 1.82
PLXND1-202ENST00000501038 MAGI2Q86UL8 1455 aa26.43■■□□□ 1.82
PLXND1-202ENST00000501038 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
PLXND1-202ENST00000501038 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
PLXND1-202ENST00000501038 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
PLXND1-202ENST00000501038 ATP7AQ04656 1500 aa26.41■■□□□ 1.82
PLXND1-202ENST00000501038 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
PLXND1-202ENST00000501038 AFAP1Q8N556 730 aa26.39■■□□□ 1.82
PLXND1-202ENST00000501038 CD109Q6YHK3 1445 aa26.38■■□□□ 1.81
PLXND1-202ENST00000501038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.32■■□□□ 1.8
PLXND1-202ENST00000501038 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
PLXND1-202ENST00000501038 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
PLXND1-202ENST00000501038 NBPF8Q3BBV2 869 aa26.31■■□□□ 1.8
PLXND1-202ENST00000501038 EIF2AK4Q9P2K8 1649 aaKnown RBP26.3■■□□□ 1.8
PLXND1-202ENST00000501038 KIDINS220Q9ULH0 1771 aa26.3■■□□□ 1.8
PLXND1-202ENST00000501038 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
PLXND1-202ENST00000501038 CYB5RLQ6IPT4 315 aa26.27■■□□□ 1.8
PLXND1-202ENST00000501038 HSPA5P11021 654 aaKnown RBP26.25■■□□□ 1.79
PLXND1-202ENST00000501038 KDM5CP41229 1560 aa26.25■■□□□ 1.79
PLXND1-202ENST00000501038 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms