RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
CSTF1-207ENST00000498689 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
CSTF1-207ENST00000498689 DSG3P32926 999 aa9.32□□□□□ -0.92
CSTF1-207ENST00000498689 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
CSTF1-207ENST00000498689 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
CSTF1-207ENST00000498689 MLECQ14165 292 aa9.29□□□□□ -0.92
CSTF1-207ENST00000498689 UHRF1BP1Q6BDS2 1440 aa9.29□□□□□ -0.92
CSTF1-207ENST00000498689 C3P01024 1663 aa9.29□□□□□ -0.92
CSTF1-207ENST00000498689 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
CSTF1-207ENST00000498689 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
CSTF1-207ENST00000498689 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
CSTF1-207ENST00000498689 NCOA1Q15788 1441 aa9.27□□□□□ -0.93
CSTF1-207ENST00000498689 FANCAO15360 1455 aa9.27□□□□□ -0.93
CSTF1-207ENST00000498689 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
CSTF1-207ENST00000498689 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
CSTF1-207ENST00000498689 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
CSTF1-207ENST00000498689 ARHGEF12Q9NZN5 1544 aa9.25□□□□□ -0.93
CSTF1-207ENST00000498689 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
CSTF1-207ENST00000498689 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
CSTF1-207ENST00000498689 DISP1Q96F81 1524 aa9.23□□□□□ -0.93
CSTF1-207ENST00000498689 ABCA9Q8IUA7 1624 aa9.23□□□□□ -0.93
CSTF1-207ENST00000498689 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
CSTF1-207ENST00000498689 ABCB7O75027 752 aa9.2□□□□□ -0.94
CSTF1-207ENST00000498689 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
CSTF1-207ENST00000498689 SETBP1Q9Y6X0 1596 aa9.19□□□□□ -0.94
CSTF1-207ENST00000498689 TOM1O60784 492 aa9.18□□□□□ -0.94
CSTF1-207ENST00000498689 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
CSTF1-207ENST00000498689 ZFYVE16Q7Z3T8 1539 aa9.18□□□□□ -0.94
CSTF1-207ENST00000498689 APLP2Q06481 763 aa9.17□□□□□ -0.94
CSTF1-207ENST00000498689 NEO1Q92859 1461 aa9.16□□□□□ -0.94
CSTF1-207ENST00000498689 AKNAQ7Z591 1439 aa9.16□□□□□ -0.94
CSTF1-207ENST00000498689 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.94
CSTF1-207ENST00000498689 POTEHQ6S545 545 aa9.15□□□□□ -0.94
CSTF1-207ENST00000498689 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.95
CSTF1-207ENST00000498689 ZNF219Q9P2Y4 722 aaPredicted RBP9.14□□□□□ -0.95
CSTF1-207ENST00000498689 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
CSTF1-207ENST00000498689 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
CSTF1-207ENST00000498689 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
CSTF1-207ENST00000498689 ZNF142P52746 1687 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-207ENST00000498689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-207ENST00000498689 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
CSTF1-207ENST00000498689 ABCA8O94911 1581 aa9.11□□□□□ -0.95
CSTF1-207ENST00000498689 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-207ENST00000498689 EP400Q96L91 3159 aa9.1□□□□□ -0.95
CSTF1-207ENST00000498689 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
CSTF1-207ENST00000498689 FHOD3Q2V2M9 1422 aa9.09□□□□□ -0.95
CSTF1-207ENST00000498689 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
CSTF1-207ENST00000498689 CPS1P31327 1500 aa9.09□□□□□ -0.95
CSTF1-207ENST00000498689 CEP350Q5VT06 3117 aa9.09□□□□□ -0.95
CSTF1-207ENST00000498689 XIRP1Q702N8 1843 aaKnown RBP9.08□□□□□ -0.96
CSTF1-207ENST00000498689 PTPRKQ15262 1439 aa9.08□□□□□ -0.96
CSTF1-207ENST00000498689 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
CSTF1-207ENST00000498689 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-207ENST00000498689 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
CSTF1-207ENST00000498689 TCOF1Q13428 1488 aaKnown RBP9.07□□□□□ -0.96
CSTF1-207ENST00000498689 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
CSTF1-207ENST00000498689 MYO3AQ8NEV4 1616 aa9.06□□□□□ -0.96
CSTF1-207ENST00000498689 ARID3CA6NKF2 412 aa9.06□□□□□ -0.96
CSTF1-207ENST00000498689 SHANK2Q9UPX8 1470 aa9.05□□□□□ -0.96
CSTF1-207ENST00000498689 RNF17Q9BXT8 1623 aaKnown RBP9.05□□□□□ -0.96
CSTF1-207ENST00000498689 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
CSTF1-207ENST00000498689 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
CSTF1-207ENST00000498689 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
CSTF1-207ENST00000498689 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
CSTF1-207ENST00000498689 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
CSTF1-207ENST00000498689 IGF1RP08069 1367 aa9.03□□□□□ -0.96
CSTF1-207ENST00000498689 CFAP74Q9C0B2 1584 aa9.03□□□□□ -0.96
CSTF1-207ENST00000498689 ATP10AO60312 1499 aa9.02□□□□□ -0.96
CSTF1-207ENST00000498689 C9orf84Q5VXU9 1444 aa9.02□□□□□ -0.97
CSTF1-207ENST00000498689 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
CSTF1-207ENST00000498689 MAGI2Q86UL8 1455 aa9.02□□□□□ -0.97
CSTF1-207ENST00000498689 LRP5O75197 1615 aa9.02□□□□□ -0.97
CSTF1-207ENST00000498689 CEP170BQ9Y4F5 1589 aaPredicted RBP9□□□□□ -0.97
CSTF1-207ENST00000498689 PKD2Q13563 968 aa9□□□□□ -0.97
CSTF1-207ENST00000498689 ATP10BO94823 1461 aa8.99□□□□□ -0.97
CSTF1-207ENST00000498689 MROH2AA6NES4 1674 aa8.98□□□□□ -0.97
CSTF1-207ENST00000498689 ZRANB1Q9UGI0 708 aa8.97□□□□□ -0.97
CSTF1-207ENST00000498689 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
CSTF1-207ENST00000498689 DNMT1P26358 1616 aaKnown RBP8.95□□□□□ -0.98
CSTF1-207ENST00000498689 MYCNP04198 464 aaPredicted RBP8.95□□□□□ -0.98
CSTF1-207ENST00000498689 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
CSTF1-207ENST00000498689 ABCA6Q8N139 1617 aa8.94□□□□□ -0.98
CSTF1-207ENST00000498689 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
CSTF1-207ENST00000498689 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CSTF1-207ENST00000498689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.94□□□□□ -0.98
CSTF1-207ENST00000498689 LRP6O75581 1613 aa8.94□□□□□ -0.98
CSTF1-207ENST00000498689 CTTNBP2Q8WZ74 1663 aa8.94□□□□□ -0.98
CSTF1-207ENST00000498689 SYNMO15061 1565 aa8.93□□□□□ -0.98
CSTF1-207ENST00000498689 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
CSTF1-207ENST00000498689 NPATQ14207 1427 aa8.91□□□□□ -0.98
CSTF1-207ENST00000498689 YY1P25490 414 aa8.91□□□□□ -0.98
CSTF1-207ENST00000498689 POLA2Q14181 598 aa8.91□□□□□ -0.98
CSTF1-207ENST00000498689 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
CSTF1-207ENST00000498689 AGLP35573 1532 aa8.9□□□□□ -0.99
CSTF1-207ENST00000498689 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
CSTF1-207ENST00000498689 IQGAP1P46940 1657 aa8.89□□□□□ -0.99
CSTF1-207ENST00000498689 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
CSTF1-207ENST00000498689 REREQ9P2R6 1566 aa8.89□□□□□ -0.99
CSTF1-207ENST00000498689 RGS12O14924 1447 aa8.88□□□□□ -0.99
CSTF1-207ENST00000498689 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms