RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 ADGBQ8N7X0 1667 aa23.24■■□□□ 1.31
RPN1-207ENST00000497289 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
RPN1-207ENST00000497289 ABCC5O15440 1437 aa23.21■■□□□ 1.31
RPN1-207ENST00000497289 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
RPN1-207ENST00000497289 ZNF644Q9H582 1327 aaPredicted RBP23.19■■□□□ 1.3
RPN1-207ENST00000497289 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
RPN1-207ENST00000497289 ROCK1Q13464 1354 aa23.19■■□□□ 1.3
RPN1-207ENST00000497289 CHIC2Q9UKJ5 165 aa23.18■■□□□ 1.3
RPN1-207ENST00000497289 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
RPN1-207ENST00000497289 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
RPN1-207ENST00000497289 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
RPN1-207ENST00000497289 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
RPN1-207ENST00000497289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.14■■□□□ 1.293e-13■■■□□ 19.1
RPN1-207ENST00000497289 KDM6BO15054 1643 aa23.13■■□□□ 1.29
RPN1-207ENST00000497289 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
RPN1-207ENST00000497289 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
RPN1-207ENST00000497289 ADGRL2O95490 1459 aa23.1■■□□□ 1.29
RPN1-207ENST00000497289 SAMD9LQ8IVG5 1584 aa23.1■■□□□ 1.29
RPN1-207ENST00000497289 SHANK2Q9UPX8 1470 aa23.09■■□□□ 1.29
RPN1-207ENST00000497289 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
RPN1-207ENST00000497289 ARHGAP5Q13017 1502 aa23.06■■□□□ 1.28
RPN1-207ENST00000497289 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
RPN1-207ENST00000497289 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
RPN1-207ENST00000497289 ZNF316A6NFI3 1004 aaPredicted RBP23■■□□□ 1.27
RPN1-207ENST00000497289 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
RPN1-207ENST00000497289 CCDC141Q6ZP82 1450 aa22.99■■□□□ 1.27
RPN1-207ENST00000497289 MBD5Q9P267 1494 aa22.99■■□□□ 1.27
RPN1-207ENST00000497289 WDR7Q9Y4E6 1490 aa22.98■■□□□ 1.27
RPN1-207ENST00000497289 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
RPN1-207ENST00000497289 SYCP2Q9BX26 1530 aa22.98■■□□□ 1.27
RPN1-207ENST00000497289 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
RPN1-207ENST00000497289 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
RPN1-207ENST00000497289 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
RPN1-207ENST00000497289 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
RPN1-207ENST00000497289 PLCH2O75038 1416 aa22.96■■□□□ 1.27
RPN1-207ENST00000497289 MAST1Q9Y2H9 1570 aa22.95■■□□□ 1.26
RPN1-207ENST00000497289 ARAP3Q8WWN8 1544 aa22.94■■□□□ 1.26
RPN1-207ENST00000497289 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
RPN1-207ENST00000497289 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
RPN1-207ENST00000497289 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
RPN1-207ENST00000497289 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
RPN1-207ENST00000497289 DENND4BO75064 1496 aaPredicted RBP22.93■■□□□ 1.26
RPN1-207ENST00000497289 HNRNPMP52272 730 aaKnown RBP eCLIP22.93■■□□□ 1.26
RPN1-207ENST00000497289 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
RPN1-207ENST00000497289 ABCA9Q8IUA7 1624 aa22.92■■□□□ 1.26
RPN1-207ENST00000497289 ABCC1P33527 1531 aa22.89■■□□□ 1.25
RPN1-207ENST00000497289 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
RPN1-207ENST00000497289 MPHOSPH9Q99550 1183 aa22.88■■□□□ 1.25
RPN1-207ENST00000497289 ASXL2Q76L83 1435 aa22.87■■□□□ 1.25
RPN1-207ENST00000497289 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
RPN1-207ENST00000497289 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
RPN1-207ENST00000497289 EFCAB2Q5VUJ9 269 aa22.85■■□□□ 1.25
RPN1-207ENST00000497289 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
RPN1-207ENST00000497289 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
RPN1-207ENST00000497289 PZPP20742 1482 aa22.83■■□□□ 1.25
RPN1-207ENST00000497289 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
RPN1-207ENST00000497289 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
RPN1-207ENST00000497289 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
RPN1-207ENST00000497289 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
RPN1-207ENST00000497289 FANCAO15360 1455 aa22.75■■□□□ 1.23
RPN1-207ENST00000497289 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
RPN1-207ENST00000497289 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
RPN1-207ENST00000497289 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
RPN1-207ENST00000497289 RIMBP3BA6NNM3 1639 aa22.74■■□□□ 1.23
RPN1-207ENST00000497289 RIMBP3Q9UFD9 1639 aa22.74■■□□□ 1.23
RPN1-207ENST00000497289 UNC13BO14795 1591 aa22.74■■□□□ 1.23
RPN1-207ENST00000497289 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
RPN1-207ENST00000497289 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
RPN1-207ENST00000497289 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
RPN1-207ENST00000497289 FOXD1Q16676 465 aa22.71■■□□□ 1.23
RPN1-207ENST00000497289 RPRD2Q5VT52 1461 aaKnown RBP22.71■■□□□ 1.23
RPN1-207ENST00000497289 NUP155O75694 1391 aa22.69■■□□□ 1.22
RPN1-207ENST00000497289 ZFYVE16Q7Z3T8 1539 aa22.68■■□□□ 1.22
RPN1-207ENST00000497289 ADGRL1O94910 1474 aa22.68■■□□□ 1.22
RPN1-207ENST00000497289 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
RPN1-207ENST00000497289 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
RPN1-207ENST00000497289 INO80Q9ULG1 1556 aaPredicted RBP22.67■■□□□ 1.22
RPN1-207ENST00000497289 FAM135AQ9P2D6 1515 aa22.65■■□□□ 1.22
RPN1-207ENST00000497289 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
RPN1-207ENST00000497289 PKD2Q13563 968 aa22.63■■□□□ 1.21
RPN1-207ENST00000497289 ATP7AQ04656 1500 aa22.63■■□□□ 1.21
RPN1-207ENST00000497289 SPAG9O60271 1321 aaKnown RBP22.63■■□□□ 1.21
RPN1-207ENST00000497289 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
RPN1-207ENST00000497289 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
RPN1-207ENST00000497289 CD109Q6YHK3 1445 aa22.61■■□□□ 1.21
RPN1-207ENST00000497289 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
RPN1-207ENST00000497289 AFAP1Q8N556 730 aa22.57■■□□□ 1.2
RPN1-207ENST00000497289 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
RPN1-207ENST00000497289 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
RPN1-207ENST00000497289 L3MBTL2Q969R5 705 aa22.55■■□□□ 1.2
RPN1-207ENST00000497289 ZNF518AQ6AHZ1 1483 aa22.55■■□□□ 1.2
RPN1-207ENST00000497289 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
RPN1-207ENST00000497289 EIF2AK4Q9P2K8 1649 aaKnown RBP22.54■■□□□ 1.2
RPN1-207ENST00000497289 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
RPN1-207ENST00000497289 GLI2P10070 1586 aa22.52■■□□□ 1.2
RPN1-207ENST00000497289 NEO1Q92859 1461 aa22.51■■□□□ 1.19
RPN1-207ENST00000497289 KDM5CP41229 1560 aa22.51■■□□□ 1.19
RPN1-207ENST00000497289 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
RPN1-207ENST00000497289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.198e-7■■□□□ 11.6
RPN1-207ENST00000497289 HECW2Q9P2P5 1572 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms