RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
HMGCL-206ENST00000496907 CD109Q6YHK3 1445 aa9.78□□□□□ -0.84
HMGCL-206ENST00000496907 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
HMGCL-206ENST00000496907 KIAA0556O60303 1618 aa9.77□□□□□ -0.85
HMGCL-206ENST00000496907 MADDQ8WXG6 1647 aa9.77□□□□□ -0.85
HMGCL-206ENST00000496907 MAGI3Q5TCQ9 1506 aa9.77□□□□□ -0.85
HMGCL-206ENST00000496907 UGGT2Q9NYU1 1516 aa9.76□□□□□ -0.85
HMGCL-206ENST00000496907 ARID4BQ4LE39 1312 aaPredicted RBP9.75□□□□□ -0.85
HMGCL-206ENST00000496907 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
HMGCL-206ENST00000496907 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
HMGCL-206ENST00000496907 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
HMGCL-206ENST00000496907 RIMS1Q86UR5 1692 aaKnown RBP9.72□□□□□ -0.85
HMGCL-206ENST00000496907 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
HMGCL-206ENST00000496907 ARAP3Q8WWN8 1544 aa9.7□□□□□ -0.86
HMGCL-206ENST00000496907 BCORL1Q5H9F3 1711 aa9.7□□□□□ -0.86
HMGCL-206ENST00000496907 CTTNBP2Q8WZ74 1663 aa9.68□□□□□ -0.86
HMGCL-206ENST00000496907 UBAP1LF5GYI3 381 aa9.68□□□□□ -0.86
HMGCL-206ENST00000496907 ABCA8O94911 1581 aa9.67□□□□□ -0.86
HMGCL-206ENST00000496907 EFCAB5A4FU69 1503 aa9.67□□□□□ -0.86
HMGCL-206ENST00000496907 LOC105371045A0A1W2PR82 267 aa9.67□□□□□ -0.86
HMGCL-206ENST00000496907 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
HMGCL-206ENST00000496907 RANGAP1P46060 587 aaPredicted RBP9.67□□□□□ -0.86
HMGCL-206ENST00000496907 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
HMGCL-206ENST00000496907 FMN1Q68DA7 1419 aa9.66□□□□□ -0.86
HMGCL-206ENST00000496907 RAPGEF3O95398 923 aa9.66□□□□□ -0.86
HMGCL-206ENST00000496907 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
HMGCL-206ENST00000496907 GABBR2O75899 941 aa9.65□□□□□ -0.86
HMGCL-206ENST00000496907 CLIP1P30622 1438 aa9.64□□□□□ -0.87
HMGCL-206ENST00000496907 YEATS2Q9ULM3 1422 aa9.64□□□□□ -0.87
HMGCL-206ENST00000496907 ABCA9Q8IUA7 1624 aa9.64□□□□□ -0.87
HMGCL-206ENST00000496907 STRCQ7RTU9 1775 aa9.63□□□□□ -0.87
HMGCL-206ENST00000496907 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
HMGCL-206ENST00000496907 HSPA1LP34931 641 aa9.63□□□□□ -0.87
HMGCL-206ENST00000496907 CDK11AQ9UQ88 783 aaPredicted RBP9.63□□□□□ -0.87
HMGCL-206ENST00000496907 FRMPD1Q5SYB0 1578 aa9.63□□□□□ -0.87
HMGCL-206ENST00000496907 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
HMGCL-206ENST00000496907 POLA2Q14181 598 aa9.62□□□□□ -0.87
HMGCL-206ENST00000496907 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
HMGCL-206ENST00000496907 NEO1Q92859 1461 aa9.61□□□□□ -0.87
HMGCL-206ENST00000496907 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
HMGCL-206ENST00000496907 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
HMGCL-206ENST00000496907 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
HMGCL-206ENST00000496907 CEP162Q5TB80 1403 aa9.59□□□□□ -0.87
HMGCL-206ENST00000496907 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
HMGCL-206ENST00000496907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
HMGCL-206ENST00000496907 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
HMGCL-206ENST00000496907 ATP10BO94823 1461 aa9.59□□□□□ -0.87
HMGCL-206ENST00000496907 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 FHOD3Q2V2M9 1422 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 POGZQ7Z3K3 1410 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 PIP4K2BP78356 416 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 MLECQ14165 292 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
HMGCL-206ENST00000496907 FER1L4A9Z1Z3 1794 aa9.58□□□□□ -0.88
HMGCL-206ENST00000496907 FANCAO15360 1455 aa9.57□□□□□ -0.88
HMGCL-206ENST00000496907 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
HMGCL-206ENST00000496907 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
HMGCL-206ENST00000496907 ZBTB22O15209 634 aa9.56□□□□□ -0.88
HMGCL-206ENST00000496907 DENND4BO75064 1496 aaPredicted RBP9.55□□□□□ -0.88
HMGCL-206ENST00000496907 AKNAQ7Z591 1439 aa9.55□□□□□ -0.88
HMGCL-206ENST00000496907 CASKIN1Q8WXD9 1431 aa9.55□□□□□ -0.88
HMGCL-206ENST00000496907 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
HMGCL-206ENST00000496907 SIGLEC1Q9BZZ2 1709 aa9.54□□□□□ -0.88
HMGCL-206ENST00000496907 RAPGEF6Q8TEU7 1601 aa9.54□□□□□ -0.88
HMGCL-206ENST00000496907 CEBPAP49715 358 aaPredicted RBP9.54□□□□□ -0.88
HMGCL-206ENST00000496907 ZFYVE16Q7Z3T8 1539 aa9.54□□□□□ -0.88
HMGCL-206ENST00000496907 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
HMGCL-206ENST00000496907 TTC37Q6PGP7 1564 aa9.53□□□□□ -0.88
HMGCL-206ENST00000496907 PTPRTO14522 1441 aa9.52□□□□□ -0.89
HMGCL-206ENST00000496907 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
HMGCL-206ENST00000496907 POTEMA6NI47 508 aa9.51□□□□□ -0.89
HMGCL-206ENST00000496907 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
HMGCL-206ENST00000496907 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-206ENST00000496907 RGS17Q9UGC6 210 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-206ENST00000496907 CCDC18Q5T9S5 1454 aa9.51□□□□□ -0.89
HMGCL-206ENST00000496907 ZNF335Q9H4Z2 1342 aaPredicted RBP9.51□□□□□ -0.89
HMGCL-206ENST00000496907 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
HMGCL-206ENST00000496907 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
HMGCL-206ENST00000496907 NUP153P49790 1475 aaKnown RBP9.49□□□□□ -0.89
HMGCL-206ENST00000496907 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
HMGCL-206ENST00000496907 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
HMGCL-206ENST00000496907 MAGI2Q86UL8 1455 aa9.47□□□□□ -0.89
HMGCL-206ENST00000496907 SETD1AO15047 1707 aaKnown RBP9.47□□□□□ -0.89
HMGCL-206ENST00000496907 UHRF1BP1Q6BDS2 1440 aa9.47□□□□□ -0.89
HMGCL-206ENST00000496907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.89
HMGCL-206ENST00000496907 ARHGEF12Q9NZN5 1544 aa9.46□□□□□ -0.89
HMGCL-206ENST00000496907 MAP3K1Q13233 1512 aa9.45□□□□□ -0.9
HMGCL-206ENST00000496907 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
HMGCL-206ENST00000496907 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
HMGCL-206ENST00000496907 MTUS2Q5JR59 1369 aa9.44□□□□□ -0.9
HMGCL-206ENST00000496907 TROQ12816 1431 aaPredicted RBP9.44□□□□□ -0.9
HMGCL-206ENST00000496907 C9orf84Q5VXU9 1444 aa9.44□□□□□ -0.9
HMGCL-206ENST00000496907 ATP10AO60312 1499 aa9.43□□□□□ -0.9
HMGCL-206ENST00000496907 SCAPERQ9BY12 1400 aa9.43□□□□□ -0.9
HMGCL-206ENST00000496907 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
HMGCL-206ENST00000496907 C3P01024 1663 aa9.4□□□□□ -0.9
HMGCL-206ENST00000496907 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.9
HMGCL-206ENST00000496907 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
HMGCL-206ENST00000496907 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
HMGCL-206ENST00000496907 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms