RNA–Protein interactions for RNA: ENST00000496582.5

RPL35A-209, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-209ENST00000496582 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
RPL35A-209ENST00000496582 PTPRTO14522 1441 aa11.36□□□□□ -0.59
RPL35A-209ENST00000496582 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
RPL35A-209ENST00000496582 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
RPL35A-209ENST00000496582 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
RPL35A-209ENST00000496582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
RPL35A-209ENST00000496582 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
RPL35A-209ENST00000496582 HSPA2P54652 639 aa11.33□□□□□ -0.6
RPL35A-209ENST00000496582 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
RPL35A-209ENST00000496582 STRCQ7RTU9 1775 aa11.33□□□□□ -0.6
RPL35A-209ENST00000496582 ATP10AO60312 1499 aa11.32□□□□□ -0.6
RPL35A-209ENST00000496582 UHRF1BP1Q6BDS2 1440 aa11.32□□□□□ -0.6
RPL35A-209ENST00000496582 ATP1B4Q9UN42 357 aaPredicted RBP11.31□□□□□ -0.6
RPL35A-209ENST00000496582 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
RPL35A-209ENST00000496582 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
RPL35A-209ENST00000496582 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
RPL35A-209ENST00000496582 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
RPL35A-209ENST00000496582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.3□□□□□ -0.6not detected■□□□□ 9.6
RPL35A-209ENST00000496582 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
RPL35A-209ENST00000496582 LOC105371045A0A1W2PR82 267 aa11.29□□□□□ -0.6
RPL35A-209ENST00000496582 FMN1Q68DA7 1419 aa11.28□□□□□ -0.6
RPL35A-209ENST00000496582 PLCH2O75038 1416 aa11.27□□□□□ -0.6
RPL35A-209ENST00000496582 CLIP1P30622 1438 aa11.26□□□□□ -0.61
RPL35A-209ENST00000496582 ZNF518AQ6AHZ1 1483 aa11.25□□□□□ -0.61
RPL35A-209ENST00000496582 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
RPL35A-209ENST00000496582 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
RPL35A-209ENST00000496582 AGLP35573 1532 aa11.25□□□□□ -0.61
RPL35A-209ENST00000496582 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
RPL35A-209ENST00000496582 EFCAB2Q5VUJ9 269 aa11.24□□□□□ -0.61
RPL35A-209ENST00000496582 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
RPL35A-209ENST00000496582 MYO5CQ9NQX4 1742 aa11.23□□□□□ -0.61
RPL35A-209ENST00000496582 CDK11AQ9UQ88 783 aaPredicted RBP11.23□□□□□ -0.61
RPL35A-209ENST00000496582 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
RPL35A-209ENST00000496582 KDM5CP41229 1560 aa11.22□□□□□ -0.61
RPL35A-209ENST00000496582 NPATQ14207 1427 aa11.21□□□□□ -0.61
RPL35A-209ENST00000496582 C3P01024 1663 aa11.2□□□□□ -0.62
RPL35A-209ENST00000496582 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
RPL35A-209ENST00000496582 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
RPL35A-209ENST00000496582 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
RPL35A-209ENST00000496582 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
RPL35A-209ENST00000496582 MLECQ14165 292 aa11.19□□□□□ -0.62
RPL35A-209ENST00000496582 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
RPL35A-209ENST00000496582 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
RPL35A-209ENST00000496582 CDK13Q14004 1512 aaKnown RBP11.18□□□□□ -0.62
RPL35A-209ENST00000496582 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
RPL35A-209ENST00000496582 PKD2Q13563 968 aa11.16□□□□□ -0.62
RPL35A-209ENST00000496582 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
RPL35A-209ENST00000496582 DIP2CQ9Y2E4 1556 aa11.15□□□□□ -0.62
RPL35A-209ENST00000496582 KIF14Q15058 1648 aa11.14□□□□□ -0.63
RPL35A-209ENST00000496582 CEBPAP49715 358 aaPredicted RBP11.14□□□□□ -0.63
RPL35A-209ENST00000496582 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
RPL35A-209ENST00000496582 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
RPL35A-209ENST00000496582 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
RPL35A-209ENST00000496582 ZNF142P52746 1687 aaPredicted RBP11.13□□□□□ -0.63
RPL35A-209ENST00000496582 CAMSAP1Q5T5Y3 1602 aa11.12□□□□□ -0.63
RPL35A-209ENST00000496582 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
RPL35A-209ENST00000496582 ARHGAP5Q13017 1502 aa11.1□□□□□ -0.63
RPL35A-209ENST00000496582 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
RPL35A-209ENST00000496582 ABCA6Q8N139 1617 aa11.09□□□□□ -0.63
RPL35A-209ENST00000496582 UBAP1LF5GYI3 381 aa11.09□□□□□ -0.63
RPL35A-209ENST00000496582 TOM1O60784 492 aa11.09□□□□□ -0.63
RPL35A-209ENST00000496582 CPS1P31327 1500 aa11.09□□□□□ -0.63
RPL35A-209ENST00000496582 TCOF1Q13428 1488 aaKnown RBP11.08□□□□□ -0.64
RPL35A-209ENST00000496582 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
RPL35A-209ENST00000496582 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
RPL35A-209ENST00000496582 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
RPL35A-209ENST00000496582 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
RPL35A-209ENST00000496582 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
RPL35A-209ENST00000496582 ABCC1P33527 1531 aa11.06□□□□□ -0.64
RPL35A-209ENST00000496582 ITSN2Q9NZM3 1697 aa11.06□□□□□ -0.64
RPL35A-209ENST00000496582 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
RPL35A-209ENST00000496582 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
RPL35A-209ENST00000496582 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
RPL35A-209ENST00000496582 MTUS2Q5JR59 1369 aa11.05□□□□□ -0.64
RPL35A-209ENST00000496582 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
RPL35A-209ENST00000496582 LRRIQ1Q96JM4 1722 aa11.05□□□□□ -0.64
RPL35A-209ENST00000496582 CEP170BQ9Y4F5 1589 aaPredicted RBP11.04□□□□□ -0.64
RPL35A-209ENST00000496582 MYO3AQ8NEV4 1616 aa11.04□□□□□ -0.64
RPL35A-209ENST00000496582 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
RPL35A-209ENST00000496582 APLP2Q06481 763 aa11.03□□□□□ -0.64
RPL35A-209ENST00000496582 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
RPL35A-209ENST00000496582 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
RPL35A-209ENST00000496582 PLEKHH2Q8IVE3 1493 aa11.01□□□□□ -0.65
RPL35A-209ENST00000496582 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
RPL35A-209ENST00000496582 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
RPL35A-209ENST00000496582 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
RPL35A-209ENST00000496582 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
RPL35A-209ENST00000496582 KIAA1107Q9UPP5 1409 aa10.99□□□□□ -0.65
RPL35A-209ENST00000496582 PLXNC1O60486 1568 aa10.99□□□□□ -0.65
RPL35A-209ENST00000496582 CLTCQ00610 1675 aaKnown RBP10.98□□□□□ -0.65
RPL35A-209ENST00000496582 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
RPL35A-209ENST00000496582 NCKAP5LQ9HCH0 1330 aa10.98□□□□□ -0.65
RPL35A-209ENST00000496582 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
RPL35A-209ENST00000496582 GPATCH8Q9UKJ3 1502 aaKnown RBP10.98□□□□□ -0.65
RPL35A-209ENST00000496582 SAMD9LQ8IVG5 1584 aa10.98□□□□□ -0.65
RPL35A-209ENST00000496582 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
RPL35A-209ENST00000496582 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
RPL35A-209ENST00000496582 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
RPL35A-209ENST00000496582 DNMT1P26358 1616 aaKnown RBP10.97□□□□□ -0.65
RPL35A-209ENST00000496582 DEPDC5O75140 1603 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms