RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-223ENST00000496393 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
NVL-223ENST00000496393 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
NVL-223ENST00000496393 PHLDB1Q86UU1 1377 aa13.37□□□□□ -0.27
NVL-223ENST00000496393 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
NVL-223ENST00000496393 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
NVL-223ENST00000496393 NUP153P49790 1475 aaKnown RBP13.36□□□□□ -0.27
NVL-223ENST00000496393 FHOD3Q2V2M9 1422 aa13.34□□□□□ -0.27
NVL-223ENST00000496393 RICTORQ6R327 1708 aa13.33□□□□□ -0.28
NVL-223ENST00000496393 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
NVL-223ENST00000496393 HSPA2P54652 639 aa13.32□□□□□ -0.28
NVL-223ENST00000496393 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
NVL-223ENST00000496393 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
NVL-223ENST00000496393 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
NVL-223ENST00000496393 FANCAO15360 1455 aa13.29□□□□□ -0.28
NVL-223ENST00000496393 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
NVL-223ENST00000496393 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
NVL-223ENST00000496393 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
NVL-223ENST00000496393 ZFYVE16Q7Z3T8 1539 aa13.28□□□□□ -0.28
NVL-223ENST00000496393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
NVL-223ENST00000496393 MLECQ14165 292 aa13.27□□□□□ -0.29
NVL-223ENST00000496393 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
NVL-223ENST00000496393 ZMYM4Q5VZL5 1548 aa13.26□□□□□ -0.29
NVL-223ENST00000496393 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
NVL-223ENST00000496393 FER1L4A9Z1Z3 1794 aa13.25□□□□□ -0.29
NVL-223ENST00000496393 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
NVL-223ENST00000496393 CDK13Q14004 1512 aaKnown RBP13.24□□□□□ -0.29
NVL-223ENST00000496393 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
NVL-223ENST00000496393 ABCB7O75027 752 aa13.19□□□□□ -0.3
NVL-223ENST00000496393 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
NVL-223ENST00000496393 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
NVL-223ENST00000496393 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
NVL-223ENST00000496393 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
NVL-223ENST00000496393 EEA1Q15075 1411 aa13.17□□□□□ -0.3
NVL-223ENST00000496393 POTEHQ6S545 545 aa13.16□□□□□ -0.3
NVL-223ENST00000496393 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
NVL-223ENST00000496393 ARHGEF12Q9NZN5 1544 aa13.16□□□□□ -0.3
NVL-223ENST00000496393 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
NVL-223ENST00000496393 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
NVL-223ENST00000496393 PLCH2O75038 1416 aa13.15□□□□□ -0.3
NVL-223ENST00000496393 C9orf84Q5VXU9 1444 aa13.15□□□□□ -0.3
NVL-223ENST00000496393 KIF14Q15058 1648 aa13.15□□□□□ -0.3
NVL-223ENST00000496393 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
NVL-223ENST00000496393 ATP10AO60312 1499 aa13.14□□□□□ -0.31
NVL-223ENST00000496393 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
NVL-223ENST00000496393 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
NVL-223ENST00000496393 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
NVL-223ENST00000496393 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
NVL-223ENST00000496393 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
NVL-223ENST00000496393 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
NVL-223ENST00000496393 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
NVL-223ENST00000496393 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
NVL-223ENST00000496393 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
NVL-223ENST00000496393 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.32
NVL-223ENST00000496393 KDM5CP41229 1560 aa13.07□□□□□ -0.32
NVL-223ENST00000496393 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
NVL-223ENST00000496393 ABCA6Q8N139 1617 aa13.07□□□□□ -0.32
NVL-223ENST00000496393 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
NVL-223ENST00000496393 ARHGAP35Q9NRY4 1499 aa13.07□□□□□ -0.32
NVL-223ENST00000496393 LRRIQ1Q96JM4 1722 aa13.06□□□□□ -0.32
NVL-223ENST00000496393 ILDR2Q71H61 639 aa13.06□□□□□ -0.32
NVL-223ENST00000496393 C3P01024 1663 aa13.05□□□□□ -0.32
NVL-223ENST00000496393 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
NVL-223ENST00000496393 APLP2Q06481 763 aa13.05□□□□□ -0.32
NVL-223ENST00000496393 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
NVL-223ENST00000496393 CLIP1P30622 1438 aa13.04□□□□□ -0.32
NVL-223ENST00000496393 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
NVL-223ENST00000496393 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.32
NVL-223ENST00000496393 REREQ9P2R6 1566 aa13.02□□□□□ -0.33
NVL-223ENST00000496393 TRAPPC8Q9Y2L5 1435 aa13.01□□□□□ -0.33
NVL-223ENST00000496393 ABCC1P33527 1531 aa13.01□□□□□ -0.33
NVL-223ENST00000496393 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
NVL-223ENST00000496393 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
NVL-223ENST00000496393 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
NVL-223ENST00000496393 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
NVL-223ENST00000496393 SETD1BQ9UPS6 1966 aaKnown RBP12.99□□□□□ -0.33
NVL-223ENST00000496393 PTPRTO14522 1441 aa12.98□□□□□ -0.33
NVL-223ENST00000496393 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
NVL-223ENST00000496393 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
NVL-223ENST00000496393 SOCS7O14512 581 aa12.97□□□□□ -0.33
NVL-223ENST00000496393 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
NVL-223ENST00000496393 AGLP35573 1532 aa12.97□□□□□ -0.33
NVL-223ENST00000496393 NCOA1Q15788 1441 aa12.96□□□□□ -0.34
NVL-223ENST00000496393 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
NVL-223ENST00000496393 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
NVL-223ENST00000496393 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
NVL-223ENST00000496393 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
NVL-223ENST00000496393 SAMD9LQ8IVG5 1584 aa12.93□□□□□ -0.34
NVL-223ENST00000496393 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
NVL-223ENST00000496393 CCDC18Q5T9S5 1454 aa12.92□□□□□ -0.34
NVL-223ENST00000496393 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
NVL-223ENST00000496393 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
NVL-223ENST00000496393 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
NVL-223ENST00000496393 MROH2AA6NES4 1674 aa12.9□□□□□ -0.34
NVL-223ENST00000496393 CLTCQ00610 1675 aaKnown RBP12.9□□□□□ -0.34
NVL-223ENST00000496393 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
NVL-223ENST00000496393 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
NVL-223ENST00000496393 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
NVL-223ENST00000496393 NPATQ14207 1427 aa12.88□□□□□ -0.35
NVL-223ENST00000496393 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
NVL-223ENST00000496393 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms