RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 KDM5BQ9UGL1 1544 aa20.13■□□□□ 0.81
SPTBN1-205ENST00000496323 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
SPTBN1-205ENST00000496323 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
SPTBN1-205ENST00000496323 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
SPTBN1-205ENST00000496323 CDC42BPAQ5VT25 1732 aa20.09■□□□□ 0.81
SPTBN1-205ENST00000496323 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.8
SPTBN1-205ENST00000496323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
SPTBN1-205ENST00000496323 GCC2Q8IWJ2 1684 aa20.05■□□□□ 0.8
SPTBN1-205ENST00000496323 KDM6BO15054 1643 aa20.04■□□□□ 0.8
SPTBN1-205ENST00000496323 KCNH8Q96L42 1107 aa20.04■□□□□ 0.8
SPTBN1-205ENST00000496323 TTC37Q6PGP7 1564 aa20.03■□□□□ 0.8
SPTBN1-205ENST00000496323 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
SPTBN1-205ENST00000496323 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
SPTBN1-205ENST00000496323 PREX2Q70Z35 1606 aa20■□□□□ 0.79
SPTBN1-205ENST00000496323 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
SPTBN1-205ENST00000496323 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
SPTBN1-205ENST00000496323 HNRNPMP52272 730 aaKnown RBP eCLIP19.98■□□□□ 0.79
SPTBN1-205ENST00000496323 CDC42BPBQ9Y5S2 1711 aa19.97■□□□□ 0.79
SPTBN1-205ENST00000496323 SAMD9LQ8IVG5 1584 aa19.97■□□□□ 0.79
SPTBN1-205ENST00000496323 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SPTBN1-205ENST00000496323 CROCC2H7BZ55 1655 aa19.95■□□□□ 0.78
SPTBN1-205ENST00000496323 DENND4BO75064 1496 aaPredicted RBP19.95■□□□□ 0.78
SPTBN1-205ENST00000496323 ARHGAP5Q13017 1502 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 TRIM52Q96A61 297 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 PLCH2O75038 1416 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 C9orf84Q5VXU9 1444 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
SPTBN1-205ENST00000496323 ARHGEF5Q12774 1597 aa19.93■□□□□ 0.78
SPTBN1-205ENST00000496323 WDR7Q9Y4E6 1490 aa19.93■□□□□ 0.78
SPTBN1-205ENST00000496323 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
SPTBN1-205ENST00000496323 TSPY4P0CV99 314 aa19.91■□□□□ 0.78
SPTBN1-205ENST00000496323 TSPY10P0CW01 314 aa19.91■□□□□ 0.78
SPTBN1-205ENST00000496323 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
SPTBN1-205ENST00000496323 ADGBQ8N7X0 1667 aa19.9■□□□□ 0.78
SPTBN1-205ENST00000496323 CCDC141Q6ZP82 1450 aa19.9■□□□□ 0.78
SPTBN1-205ENST00000496323 RSPH4AQ5TD94 716 aa19.9■□□□□ 0.78
SPTBN1-205ENST00000496323 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
SPTBN1-205ENST00000496323 ASXL2Q76L83 1435 aa19.89■□□□□ 0.77
SPTBN1-205ENST00000496323 KIAA1107Q9UPP5 1409 aa19.89■□□□□ 0.77
SPTBN1-205ENST00000496323 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
SPTBN1-205ENST00000496323 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
SPTBN1-205ENST00000496323 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
SPTBN1-205ENST00000496323 EFCAB2Q5VUJ9 269 aa19.87■□□□□ 0.77
SPTBN1-205ENST00000496323 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
SPTBN1-205ENST00000496323 ARHGEF12Q9NZN5 1544 aa19.86■□□□□ 0.77
SPTBN1-205ENST00000496323 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
SPTBN1-205ENST00000496323 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
SPTBN1-205ENST00000496323 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.76
SPTBN1-205ENST00000496323 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
SPTBN1-205ENST00000496323 FOXD1Q16676 465 aa19.82■□□□□ 0.76
SPTBN1-205ENST00000496323 PZPP20742 1482 aa19.81■□□□□ 0.76
SPTBN1-205ENST00000496323 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
SPTBN1-205ENST00000496323 ABCC1P33527 1531 aa19.79■□□□□ 0.76
SPTBN1-205ENST00000496323 ABCA9Q8IUA7 1624 aa19.79■□□□□ 0.76
SPTBN1-205ENST00000496323 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
SPTBN1-205ENST00000496323 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
SPTBN1-205ENST00000496323 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
SPTBN1-205ENST00000496323 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
SPTBN1-205ENST00000496323 TONSLQ96HA7 1378 aa19.77■□□□□ 0.75
SPTBN1-205ENST00000496323 ANKRD30BQ9BXX2 1392 aa19.77■□□□□ 0.75
SPTBN1-205ENST00000496323 FANCAO15360 1455 aa19.74■□□□□ 0.75
SPTBN1-205ENST00000496323 CYB5RLQ6IPT4 315 aa19.73■□□□□ 0.75
SPTBN1-205ENST00000496323 NUP155O75694 1391 aa19.72■□□□□ 0.75
SPTBN1-205ENST00000496323 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
SPTBN1-205ENST00000496323 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
SPTBN1-205ENST00000496323 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
SPTBN1-205ENST00000496323 PKD2Q13563 968 aa19.69■□□□□ 0.74
SPTBN1-205ENST00000496323 RIMBP3CA6NJZ7 1639 aa19.68■□□□□ 0.74
SPTBN1-205ENST00000496323 RIMBP3BA6NNM3 1639 aa19.68■□□□□ 0.74
SPTBN1-205ENST00000496323 RIMBP3Q9UFD9 1639 aa19.68■□□□□ 0.74
SPTBN1-205ENST00000496323 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
SPTBN1-205ENST00000496323 RPRD2Q5VT52 1461 aaKnown RBP19.66■□□□□ 0.74
SPTBN1-205ENST00000496323 SCAPERQ9BY12 1400 aa19.66■□□□□ 0.74
SPTBN1-205ENST00000496323 ADGRL1O94910 1474 aa19.65■□□□□ 0.74
SPTBN1-205ENST00000496323 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
SPTBN1-205ENST00000496323 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
SPTBN1-205ENST00000496323 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
SPTBN1-205ENST00000496323 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
SPTBN1-205ENST00000496323 ZFYVE16Q7Z3T8 1539 aa19.62■□□□□ 0.73
SPTBN1-205ENST00000496323 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
SPTBN1-205ENST00000496323 FAM135AQ9P2D6 1515 aa19.6■□□□□ 0.73
SPTBN1-205ENST00000496323 UNC13BO14795 1591 aa19.59■□□□□ 0.73
SPTBN1-205ENST00000496323 TEX14Q8IWB6 1497 aa19.58■□□□□ 0.73
SPTBN1-205ENST00000496323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.725e-12■■□□□ 11.9
SPTBN1-205ENST00000496323 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
SPTBN1-205ENST00000496323 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
SPTBN1-205ENST00000496323 MAGI2Q86UL8 1455 aa19.56■□□□□ 0.72
SPTBN1-205ENST00000496323 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
SPTBN1-205ENST00000496323 POGZQ7Z3K3 1410 aa19.51■□□□□ 0.71
SPTBN1-205ENST00000496323 IQGAP3Q86VI3 1631 aa19.51■□□□□ 0.71
SPTBN1-205ENST00000496323 CFAP74Q9C0B2 1584 aa19.51■□□□□ 0.71
SPTBN1-205ENST00000496323 NEO1Q92859 1461 aa19.5■□□□□ 0.71
SPTBN1-205ENST00000496323 NBPF8Q3BBV2 869 aa19.5■□□□□ 0.71
SPTBN1-205ENST00000496323 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
SPTBN1-205ENST00000496323 DHX29Q7Z478 1369 aaKnown RBP19.49■□□□□ 0.71
SPTBN1-205ENST00000496323 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
SPTBN1-205ENST00000496323 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
SPTBN1-205ENST00000496323 GLI2P10070 1586 aa19.48■□□□□ 0.71
SPTBN1-205ENST00000496323 MIER1Q8N108 512 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms