RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
ERGIC3-219ENST00000496172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
ERGIC3-219ENST00000496172 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
ERGIC3-219ENST00000496172 STRCQ7RTU9 1775 aa17.16■□□□□ 0.34
ERGIC3-219ENST00000496172 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
ERGIC3-219ENST00000496172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
ERGIC3-219ENST00000496172 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
ERGIC3-219ENST00000496172 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-219ENST00000496172 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
ERGIC3-219ENST00000496172 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
ERGIC3-219ENST00000496172 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
ERGIC3-219ENST00000496172 PTPRTO14522 1441 aa17.06■□□□□ 0.32
ERGIC3-219ENST00000496172 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
ERGIC3-219ENST00000496172 ATP10AO60312 1499 aa17.05■□□□□ 0.32
ERGIC3-219ENST00000496172 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
ERGIC3-219ENST00000496172 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
ERGIC3-219ENST00000496172 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
ERGIC3-219ENST00000496172 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
ERGIC3-219ENST00000496172 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
ERGIC3-219ENST00000496172 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
ERGIC3-219ENST00000496172 REREQ9P2R6 1566 aa17.02■□□□□ 0.31
ERGIC3-219ENST00000496172 PLCH2O75038 1416 aa17.01■□□□□ 0.31
ERGIC3-219ENST00000496172 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
ERGIC3-219ENST00000496172 MLECQ14165 292 aa17■□□□□ 0.31
ERGIC3-219ENST00000496172 KDM5CP41229 1560 aa16.99■□□□□ 0.31
ERGIC3-219ENST00000496172 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
ERGIC3-219ENST00000496172 C3P01024 1663 aa16.97■□□□□ 0.31
ERGIC3-219ENST00000496172 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
ERGIC3-219ENST00000496172 ZNF518AQ6AHZ1 1483 aa16.96■□□□□ 0.31
ERGIC3-219ENST00000496172 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
ERGIC3-219ENST00000496172 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
ERGIC3-219ENST00000496172 CDK13Q14004 1512 aaKnown RBP16.94■□□□□ 0.3
ERGIC3-219ENST00000496172 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
ERGIC3-219ENST00000496172 AGLP35573 1532 aa16.92■□□□□ 0.3
ERGIC3-219ENST00000496172 CLIP1P30622 1438 aa16.9■□□□□ 0.3
ERGIC3-219ENST00000496172 TRAPPC8Q9Y2L5 1435 aa16.89■□□□□ 0.29
ERGIC3-219ENST00000496172 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
ERGIC3-219ENST00000496172 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
ERGIC3-219ENST00000496172 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
ERGIC3-219ENST00000496172 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
ERGIC3-219ENST00000496172 KIF14Q15058 1648 aa16.86■□□□□ 0.29
ERGIC3-219ENST00000496172 MROH2AA6NES4 1674 aa16.85■□□□□ 0.29
ERGIC3-219ENST00000496172 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
ERGIC3-219ENST00000496172 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
ERGIC3-219ENST00000496172 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-219ENST00000496172 NPATQ14207 1427 aa16.83■□□□□ 0.28
ERGIC3-219ENST00000496172 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
ERGIC3-219ENST00000496172 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
ERGIC3-219ENST00000496172 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
ERGIC3-219ENST00000496172 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
ERGIC3-219ENST00000496172 CDC42BPBQ9Y5S2 1711 aa16.8■□□□□ 0.28
ERGIC3-219ENST00000496172 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
ERGIC3-219ENST00000496172 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
ERGIC3-219ENST00000496172 ABCC1P33527 1531 aa16.79■□□□□ 0.28
ERGIC3-219ENST00000496172 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
ERGIC3-219ENST00000496172 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
ERGIC3-219ENST00000496172 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
ERGIC3-219ENST00000496172 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
ERGIC3-219ENST00000496172 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
ERGIC3-219ENST00000496172 MED1Q15648 1581 aaPredicted RBP16.76■□□□□ 0.27
ERGIC3-219ENST00000496172 TCOF1Q13428 1488 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-219ENST00000496172 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
ERGIC3-219ENST00000496172 ESF1Q9H501 851 aaKnown RBP16.74■□□□□ 0.27
ERGIC3-219ENST00000496172 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
ERGIC3-219ENST00000496172 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
ERGIC3-219ENST00000496172 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
ERGIC3-219ENST00000496172 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
ERGIC3-219ENST00000496172 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
ERGIC3-219ENST00000496172 PKD2Q13563 968 aa16.7■□□□□ 0.26
ERGIC3-219ENST00000496172 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
ERGIC3-219ENST00000496172 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
ERGIC3-219ENST00000496172 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
ERGIC3-219ENST00000496172 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
ERGIC3-219ENST00000496172 SAMD9LQ8IVG5 1584 aa16.67■□□□□ 0.26
ERGIC3-219ENST00000496172 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
ERGIC3-219ENST00000496172 CDC42BPAQ5VT25 1732 aa16.66■□□□□ 0.26
ERGIC3-219ENST00000496172 NCKAP5LQ9HCH0 1330 aa16.66■□□□□ 0.26
ERGIC3-219ENST00000496172 CPS1P31327 1500 aa16.65■□□□□ 0.26
ERGIC3-219ENST00000496172 PTPRKQ15262 1439 aa16.64■□□□□ 0.25
ERGIC3-219ENST00000496172 POLR1AO95602 1720 aaPredicted RBP16.63■□□□□ 0.25
ERGIC3-219ENST00000496172 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
ERGIC3-219ENST00000496172 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
ERGIC3-219ENST00000496172 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
ERGIC3-219ENST00000496172 HSPA1LP34931 641 aa16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 CFDP1Q9UEE9 299 aaPredicted RBP16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
ERGIC3-219ENST00000496172 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-219ENST00000496172 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
ERGIC3-219ENST00000496172 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
ERGIC3-219ENST00000496172 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.24
ERGIC3-219ENST00000496172 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
ERGIC3-219ENST00000496172 ALKQ9UM73 1620 aa16.57■□□□□ 0.24
ERGIC3-219ENST00000496172 A2MP01023 1474 aa16.56■□□□□ 0.24
ERGIC3-219ENST00000496172 TOM1O60784 492 aa16.56■□□□□ 0.24
ERGIC3-219ENST00000496172 SHANK2Q9UPX8 1470 aa16.55■□□□□ 0.24
ERGIC3-219ENST00000496172 ADGBQ8N7X0 1667 aa16.55■□□□□ 0.24
ERGIC3-219ENST00000496172 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms