RNA–Protein interactions for RNA: ENST00000495399.1

C9orf135-204, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 2

Gene C9orf135, Length 502 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-204ENST00000495399 KCNA4P22459 653 aa13.43□□□□□ -0.26
C9orf135-204ENST00000495399 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
C9orf135-204ENST00000495399 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
C9orf135-204ENST00000495399 LTBP4Q8N2S1 1624 aa13.41□□□□□ -0.26
C9orf135-204ENST00000495399 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
C9orf135-204ENST00000495399 ABCA8O94911 1581 aa13.41□□□□□ -0.26
C9orf135-204ENST00000495399 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
C9orf135-204ENST00000495399 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
C9orf135-204ENST00000495399 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
C9orf135-204ENST00000495399 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
C9orf135-204ENST00000495399 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
C9orf135-204ENST00000495399 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
C9orf135-204ENST00000495399 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
C9orf135-204ENST00000495399 NEO1Q92859 1461 aa13.35□□□□□ -0.27
C9orf135-204ENST00000495399 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
C9orf135-204ENST00000495399 PTPRTO14522 1441 aa13.32□□□□□ -0.28
C9orf135-204ENST00000495399 RICTORQ6R327 1708 aa13.32□□□□□ -0.28
C9orf135-204ENST00000495399 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
C9orf135-204ENST00000495399 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
C9orf135-204ENST00000495399 ATP10BO94823 1461 aa13.28□□□□□ -0.28
C9orf135-204ENST00000495399 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.29
C9orf135-204ENST00000495399 FANCAO15360 1455 aa13.27□□□□□ -0.29
C9orf135-204ENST00000495399 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
C9orf135-204ENST00000495399 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
C9orf135-204ENST00000495399 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
C9orf135-204ENST00000495399 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
C9orf135-204ENST00000495399 ZMYM4Q5VZL5 1548 aa13.24□□□□□ -0.29
C9orf135-204ENST00000495399 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
C9orf135-204ENST00000495399 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-204ENST00000495399 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
C9orf135-204ENST00000495399 HAX1O00165 279 aa13.23□□□□□ -0.29
C9orf135-204ENST00000495399 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
C9orf135-204ENST00000495399 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
C9orf135-204ENST00000495399 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
C9orf135-204ENST00000495399 MLECQ14165 292 aa13.21□□□□□ -0.29
C9orf135-204ENST00000495399 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
C9orf135-204ENST00000495399 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
C9orf135-204ENST00000495399 UHRF1BP1Q6BDS2 1440 aa13.18□□□□□ -0.3
C9orf135-204ENST00000495399 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
C9orf135-204ENST00000495399 ARID3CA6NKF2 412 aa13.17□□□□□ -0.3
C9orf135-204ENST00000495399 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
C9orf135-204ENST00000495399 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
C9orf135-204ENST00000495399 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
C9orf135-204ENST00000495399 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
C9orf135-204ENST00000495399 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
C9orf135-204ENST00000495399 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
C9orf135-204ENST00000495399 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
C9orf135-204ENST00000495399 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
C9orf135-204ENST00000495399 HSPA1LP34931 641 aa13.14□□□□□ -0.31
C9orf135-204ENST00000495399 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
C9orf135-204ENST00000495399 C3P01024 1663 aa13.11□□□□□ -0.31
C9orf135-204ENST00000495399 ATP10AO60312 1499 aa13.1□□□□□ -0.31
C9orf135-204ENST00000495399 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
C9orf135-204ENST00000495399 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
C9orf135-204ENST00000495399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
C9orf135-204ENST00000495399 RGS17Q9UGC6 210 aaPredicted RBP13.05□□□□□ -0.32
C9orf135-204ENST00000495399 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
C9orf135-204ENST00000495399 RAPGEF6Q8TEU7 1601 aa13.04□□□□□ -0.32
C9orf135-204ENST00000495399 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
C9orf135-204ENST00000495399 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
C9orf135-204ENST00000495399 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
C9orf135-204ENST00000495399 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
C9orf135-204ENST00000495399 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
C9orf135-204ENST00000495399 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.33
C9orf135-204ENST00000495399 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
C9orf135-204ENST00000495399 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
C9orf135-204ENST00000495399 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
C9orf135-204ENST00000495399 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
C9orf135-204ENST00000495399 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
C9orf135-204ENST00000495399 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
C9orf135-204ENST00000495399 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
C9orf135-204ENST00000495399 PLCH2O75038 1416 aa12.96□□□□□ -0.34
C9orf135-204ENST00000495399 AGLP35573 1532 aa12.95□□□□□ -0.34
C9orf135-204ENST00000495399 PLA2R1Q13018 1463 aa12.95□□□□□ -0.34
C9orf135-204ENST00000495399 KDM5CP41229 1560 aa12.94□□□□□ -0.34
C9orf135-204ENST00000495399 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
C9orf135-204ENST00000495399 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
C9orf135-204ENST00000495399 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
C9orf135-204ENST00000495399 TOM1O60784 492 aa12.92□□□□□ -0.34
C9orf135-204ENST00000495399 NPATQ14207 1427 aa12.92□□□□□ -0.34
C9orf135-204ENST00000495399 ZNF142P52746 1687 aaPredicted RBP12.92□□□□□ -0.34
C9orf135-204ENST00000495399 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
C9orf135-204ENST00000495399 PKD2Q13563 968 aa12.91□□□□□ -0.34
C9orf135-204ENST00000495399 EVX2Q03828 476 aa12.9□□□□□ -0.34
C9orf135-204ENST00000495399 POTEAQ6S8J7 498 aa12.89□□□□□ -0.35
C9orf135-204ENST00000495399 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
C9orf135-204ENST00000495399 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
C9orf135-204ENST00000495399 CPS1P31327 1500 aa12.88□□□□□ -0.35
C9orf135-204ENST00000495399 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
C9orf135-204ENST00000495399 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
C9orf135-204ENST00000495399 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
C9orf135-204ENST00000495399 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
C9orf135-204ENST00000495399 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
C9orf135-204ENST00000495399 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
C9orf135-204ENST00000495399 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
C9orf135-204ENST00000495399 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
C9orf135-204ENST00000495399 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
C9orf135-204ENST00000495399 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
C9orf135-204ENST00000495399 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
C9orf135-204ENST00000495399 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms