RNA–Protein interactions for RNA: ENST00000495373.5

ARHGEF3-212, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-212ENST00000495373 ABCC5O15440 1437 aa22.43■■□□□ 1.18
ARHGEF3-212ENST00000495373 DNMT1P26358 1616 aaKnown RBP22.42■■□□□ 1.18
ARHGEF3-212ENST00000495373 DAPK1P53355 1430 aa22.42■■□□□ 1.18
ARHGEF3-212ENST00000495373 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
ARHGEF3-212ENST00000495373 NAIPQ13075 1403 aa22.4■■□□□ 1.18
ARHGEF3-212ENST00000495373 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
ARHGEF3-212ENST00000495373 HFM1A2PYH4 1435 aa22.39■■□□□ 1.18
ARHGEF3-212ENST00000495373 PREX2Q70Z35 1606 aa22.39■■□□□ 1.17
ARHGEF3-212ENST00000495373 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
ARHGEF3-212ENST00000495373 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
ARHGEF3-212ENST00000495373 KDM6BO15054 1643 aa22.37■■□□□ 1.17
ARHGEF3-212ENST00000495373 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
ARHGEF3-212ENST00000495373 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
ARHGEF3-212ENST00000495373 WDR7Q9Y4E6 1490 aa22.34■■□□□ 1.17
ARHGEF3-212ENST00000495373 ASXL2Q76L83 1435 aa22.34■■□□□ 1.17
ARHGEF3-212ENST00000495373 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
ARHGEF3-212ENST00000495373 GCC2Q8IWJ2 1684 aa22.31■■□□□ 1.16
ARHGEF3-212ENST00000495373 HNRNPMP52272 730 aaKnown RBP eCLIP22.3■■□□□ 1.16
ARHGEF3-212ENST00000495373 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
ARHGEF3-212ENST00000495373 CROCC2H7BZ55 1655 aa22.3■■□□□ 1.16
ARHGEF3-212ENST00000495373 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
ARHGEF3-212ENST00000495373 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
ARHGEF3-212ENST00000495373 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
ARHGEF3-212ENST00000495373 MBD5Q9P267 1494 aa22.29■■□□□ 1.16
ARHGEF3-212ENST00000495373 PLCH2O75038 1416 aa22.26■■□□□ 1.15
ARHGEF3-212ENST00000495373 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
ARHGEF3-212ENST00000495373 ARHGEF12Q9NZN5 1544 aa22.25■■□□□ 1.15
ARHGEF3-212ENST00000495373 ROCK1Q13464 1354 aa22.24■■□□□ 1.15
ARHGEF3-212ENST00000495373 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
ARHGEF3-212ENST00000495373 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
ARHGEF3-212ENST00000495373 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
ARHGEF3-212ENST00000495373 ADGBQ8N7X0 1667 aa22.2■■□□□ 1.15
ARHGEF3-212ENST00000495373 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
ARHGEF3-212ENST00000495373 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
ARHGEF3-212ENST00000495373 C9orf84Q5VXU9 1444 aa22.18■■□□□ 1.14
ARHGEF3-212ENST00000495373 DENND4BO75064 1496 aaPredicted RBP22.17■■□□□ 1.14
ARHGEF3-212ENST00000495373 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
ARHGEF3-212ENST00000495373 CCDC141Q6ZP82 1450 aa22.16■■□□□ 1.14
ARHGEF3-212ENST00000495373 SHANK2Q9UPX8 1470 aa22.16■■□□□ 1.14
ARHGEF3-212ENST00000495373 ABCC1P33527 1531 aa22.15■■□□□ 1.14
ARHGEF3-212ENST00000495373 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
ARHGEF3-212ENST00000495373 KIAA1107Q9UPP5 1409 aa22.13■■□□□ 1.13
ARHGEF3-212ENST00000495373 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
ARHGEF3-212ENST00000495373 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
ARHGEF3-212ENST00000495373 ARAP3Q8WWN8 1544 aa22.12■■□□□ 1.13
ARHGEF3-212ENST00000495373 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
ARHGEF3-212ENST00000495373 TSPY4P0CV99 314 aa22.11■■□□□ 1.13
ARHGEF3-212ENST00000495373 TSPY10P0CW01 314 aa22.11■■□□□ 1.13
ARHGEF3-212ENST00000495373 FANCAO15360 1455 aa22.1■■□□□ 1.13
ARHGEF3-212ENST00000495373 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
ARHGEF3-212ENST00000495373 PLEKHH2Q8IVE3 1493 aa22.08■■□□□ 1.12
ARHGEF3-212ENST00000495373 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
ARHGEF3-212ENST00000495373 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
ARHGEF3-212ENST00000495373 AFAP1Q8N556 730 aa22.06■■□□□ 1.12
ARHGEF3-212ENST00000495373 MAST1Q9Y2H9 1570 aa22.05■■□□□ 1.12
ARHGEF3-212ENST00000495373 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
ARHGEF3-212ENST00000495373 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
ARHGEF3-212ENST00000495373 FOXD1Q16676 465 aa22.03■■□□□ 1.12
ARHGEF3-212ENST00000495373 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
ARHGEF3-212ENST00000495373 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
ARHGEF3-212ENST00000495373 PZPP20742 1482 aa22.01■■□□□ 1.11
ARHGEF3-212ENST00000495373 ADGRL1O94910 1474 aa22■■□□□ 1.11
ARHGEF3-212ENST00000495373 SCAPERQ9BY12 1400 aa21.99■■□□□ 1.11
ARHGEF3-212ENST00000495373 PLXNC1O60486 1568 aa21.98■■□□□ 1.11
ARHGEF3-212ENST00000495373 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
ARHGEF3-212ENST00000495373 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.11
ARHGEF3-212ENST00000495373 DIP2BQ9P265 1576 aa21.94■■□□□ 1.1
ARHGEF3-212ENST00000495373 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
ARHGEF3-212ENST00000495373 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
ARHGEF3-212ENST00000495373 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF3-212ENST00000495373 GLI2P10070 1586 aa21.91■■□□□ 1.1
ARHGEF3-212ENST00000495373 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
ARHGEF3-212ENST00000495373 NUP155O75694 1391 aa21.89■■□□□ 1.1
ARHGEF3-212ENST00000495373 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
ARHGEF3-212ENST00000495373 DUOX2Q9NRD8 1548 aa21.88■■□□□ 1.09
ARHGEF3-212ENST00000495373 RTEL1-TNFRSF6BF6WH68 1400 aa21.88■■□□□ 1.09
ARHGEF3-212ENST00000495373 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
ARHGEF3-212ENST00000495373 KDM5DQ9BY66 1539 aa21.87■■□□□ 1.09
ARHGEF3-212ENST00000495373 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
ARHGEF3-212ENST00000495373 CFAP74Q9C0B2 1584 aa21.86■■□□□ 1.09
ARHGEF3-212ENST00000495373 POGZQ7Z3K3 1410 aa21.85■■□□□ 1.09
ARHGEF3-212ENST00000495373 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
ARHGEF3-212ENST00000495373 PKD2Q13563 968 aa21.84■■□□□ 1.09
ARHGEF3-212ENST00000495373 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
ARHGEF3-212ENST00000495373 UNC13BO14795 1591 aa21.84■■□□□ 1.09
ARHGEF3-212ENST00000495373 RAPGEF3O95398 923 aa21.84■■□□□ 1.09
ARHGEF3-212ENST00000495373 NEO1Q92859 1461 aa21.83■■□□□ 1.09
ARHGEF3-212ENST00000495373 ZNF518AQ6AHZ1 1483 aa21.82■■□□□ 1.08
ARHGEF3-212ENST00000495373 KDM5CP41229 1560 aa21.82■■□□□ 1.08
ARHGEF3-212ENST00000495373 ERBINQ96RT1 1412 aa21.82■■□□□ 1.08
ARHGEF3-212ENST00000495373 KIF13AQ9H1H9 1805 aa21.82■■□□□ 1.08
ARHGEF3-212ENST00000495373 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
ARHGEF3-212ENST00000495373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.084e-7■■□□□ 12.8
ARHGEF3-212ENST00000495373 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
ARHGEF3-212ENST00000495373 MAGI2Q86UL8 1455 aa21.78■■□□□ 1.08
ARHGEF3-212ENST00000495373 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
ARHGEF3-212ENST00000495373 PPP1R15AO75807 674 aaPredicted RBP21.77■■□□□ 1.07
ARHGEF3-212ENST00000495373 RICTORQ6R327 1708 aa21.77■■□□□ 1.07
ARHGEF3-212ENST00000495373 TONSLQ96HA7 1378 aa21.77■■□□□ 1.07
ARHGEF3-212ENST00000495373 FRMPD1Q5SYB0 1578 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms