RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 MLECQ14165 292 aa26.46■■□□□ 1.83
COL4A2-209ENST00000494852 ATP10AO60312 1499 aa26.45■■□□□ 1.82
COL4A2-209ENST00000494852 FER1L4A9Z1Z3 1794 aa26.44■■□□□ 1.82
COL4A2-209ENST00000494852 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
COL4A2-209ENST00000494852 FMN1Q68DA7 1419 aa26.43■■□□□ 1.82
COL4A2-209ENST00000494852 ARHGEF12Q9NZN5 1544 aa26.42■■□□□ 1.82
COL4A2-209ENST00000494852 C9orf84Q5VXU9 1444 aa26.41■■□□□ 1.82
COL4A2-209ENST00000494852 CDK11AQ9UQ88 783 aaPredicted RBP26.41■■□□□ 1.82
COL4A2-209ENST00000494852 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.81
COL4A2-209ENST00000494852 CERKQ8TCT0 537 aa26.38■■□□□ 1.81
COL4A2-209ENST00000494852 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
COL4A2-209ENST00000494852 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
COL4A2-209ENST00000494852 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
COL4A2-209ENST00000494852 ARHGAP35Q9NRY4 1499 aa26.34■■□□□ 1.81
COL4A2-209ENST00000494852 KIF14Q15058 1648 aa26.32■■□□□ 1.8
COL4A2-209ENST00000494852 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
COL4A2-209ENST00000494852 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
COL4A2-209ENST00000494852 KDM5CP41229 1560 aa26.3■■□□□ 1.8
COL4A2-209ENST00000494852 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
COL4A2-209ENST00000494852 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
COL4A2-209ENST00000494852 ARHGAP5Q13017 1502 aa26.28■■□□□ 1.8
COL4A2-209ENST00000494852 CLIP1P30622 1438 aa26.27■■□□□ 1.8
COL4A2-209ENST00000494852 DMRT2Q9Y5R5 561 aa26.26■■□□□ 1.79
COL4A2-209ENST00000494852 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
COL4A2-209ENST00000494852 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
COL4A2-209ENST00000494852 UHRF1BP1Q6BDS2 1440 aa26.22■■□□□ 1.79
COL4A2-209ENST00000494852 DIP2CQ9Y2E4 1556 aa26.21■■□□□ 1.79
COL4A2-209ENST00000494852 MYT1LQ9UL68 1186 aa26.21■■□□□ 1.79
COL4A2-209ENST00000494852 MLH3Q9UHC1 1453 aa26.21■■□□□ 1.79
COL4A2-209ENST00000494852 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.78
COL4A2-209ENST00000494852 STRCQ7RTU9 1775 aa26.19■■□□□ 1.78
COL4A2-209ENST00000494852 LRRIQ1Q96JM4 1722 aa26.18■■□□□ 1.78
COL4A2-209ENST00000494852 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
COL4A2-209ENST00000494852 AGLP35573 1532 aa26.15■■□□□ 1.78
COL4A2-209ENST00000494852 ABCA6Q8N139 1617 aa26.14■■□□□ 1.78
COL4A2-209ENST00000494852 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
COL4A2-209ENST00000494852 ABCC1P33527 1531 aa26.13■■□□□ 1.77
COL4A2-209ENST00000494852 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
COL4A2-209ENST00000494852 C3P01024 1663 aa26.11■■□□□ 1.77
COL4A2-209ENST00000494852 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
COL4A2-209ENST00000494852 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
COL4A2-209ENST00000494852 PTPRTO14522 1441 aa26.1■■□□□ 1.77
COL4A2-209ENST00000494852 CASKIN1Q8WXD9 1431 aa26.1■■□□□ 1.77
COL4A2-209ENST00000494852 ITSN2Q9NZM3 1697 aa26.08■■□□□ 1.77
COL4A2-209ENST00000494852 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
COL4A2-209ENST00000494852 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
COL4A2-209ENST00000494852 KIDINS220Q9ULH0 1771 aa26.05■■□□□ 1.76
COL4A2-209ENST00000494852 CDC42BPAQ5VT25 1732 aa26.01■■□□□ 1.75
COL4A2-209ENST00000494852 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
COL4A2-209ENST00000494852 DISP3Q9P2K9 1392 aa25.97■■□□□ 1.75
COL4A2-209ENST00000494852 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
COL4A2-209ENST00000494852 NPATQ14207 1427 aa25.97■■□□□ 1.75
COL4A2-209ENST00000494852 LTBP4Q8N2S1 1624 aa25.96■■□□□ 1.75
COL4A2-209ENST00000494852 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
COL4A2-209ENST00000494852 MROH2AA6NES4 1674 aa25.94■■□□□ 1.74
COL4A2-209ENST00000494852 IQSEC2Q5JU85 1478 aa25.94■■□□□ 1.74
COL4A2-209ENST00000494852 ZNF777Q9ULD5 760 aaPredicted RBP25.93■■□□□ 1.74
COL4A2-209ENST00000494852 ZMYM3Q14202 1370 aa25.93■■□□□ 1.74
COL4A2-209ENST00000494852 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
COL4A2-209ENST00000494852 SPAG9O60271 1321 aaKnown RBP25.92■■□□□ 1.74
COL4A2-209ENST00000494852 ILDR2Q71H61 639 aa25.91■■□□□ 1.74
COL4A2-209ENST00000494852 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
COL4A2-209ENST00000494852 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
COL4A2-209ENST00000494852 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
COL4A2-209ENST00000494852 CAMSAP1Q5T5Y3 1602 aa25.88■■□□□ 1.73
COL4A2-209ENST00000494852 PLEKHH2Q8IVE3 1493 aa25.86■■□□□ 1.73
COL4A2-209ENST00000494852 SOCS7O14512 581 aa25.86■■□□□ 1.73
COL4A2-209ENST00000494852 ATP7AQ04656 1500 aa25.85■■□□□ 1.73
COL4A2-209ENST00000494852 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
COL4A2-209ENST00000494852 PLXNC1O60486 1568 aa25.84■■□□□ 1.73
COL4A2-209ENST00000494852 CFDP1Q9UEE9 299 aaPredicted RBP25.83■■□□□ 1.73
COL4A2-209ENST00000494852 INO80Q9ULG1 1556 aaPredicted RBP25.82■■□□□ 1.72
COL4A2-209ENST00000494852 A2MP01023 1474 aa25.82■■□□□ 1.72
COL4A2-209ENST00000494852 SPATA31D1Q6ZQQ2 1576 aa25.8■■□□□ 1.72
COL4A2-209ENST00000494852 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
COL4A2-209ENST00000494852 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
COL4A2-209ENST00000494852 CCNB3Q8WWL7 1395 aa25.8■■□□□ 1.72
COL4A2-209ENST00000494852 PKD2Q13563 968 aa25.79■■□□□ 1.72
COL4A2-209ENST00000494852 PPP6R1Q9UPN7 881 aa25.79■■□□□ 1.72
COL4A2-209ENST00000494852 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
COL4A2-209ENST00000494852 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
COL4A2-209ENST00000494852 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
COL4A2-209ENST00000494852 GGT6Q6P531 493 aa25.76■■□□□ 1.71
COL4A2-209ENST00000494852 MYO3AQ8NEV4 1616 aa25.76■■□□□ 1.71
COL4A2-209ENST00000494852 ZNF335Q9H4Z2 1342 aaPredicted RBP25.75■■□□□ 1.71
COL4A2-209ENST00000494852 CEP170BQ9Y4F5 1589 aaPredicted RBP25.74■■□□□ 1.71
COL4A2-209ENST00000494852 TCOF1Q13428 1488 aaKnown RBP25.74■■□□□ 1.71
COL4A2-209ENST00000494852 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
COL4A2-209ENST00000494852 ADGBQ8N7X0 1667 aa25.71■■□□□ 1.71
COL4A2-209ENST00000494852 UBAP1LF5GYI3 381 aa25.68■■□□□ 1.7
COL4A2-209ENST00000494852 MBD5Q9P267 1494 aa25.67■■□□□ 1.7
COL4A2-209ENST00000494852 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
COL4A2-209ENST00000494852 ZNF644Q9H582 1327 aaPredicted RBP25.66■■□□□ 1.7
COL4A2-209ENST00000494852 A2ML1A8K2U0 1454 aa25.65■■□□□ 1.7
COL4A2-209ENST00000494852 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
COL4A2-209ENST00000494852 DHX29Q7Z478 1369 aaKnown RBP25.63■■□□□ 1.69
COL4A2-209ENST00000494852 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
COL4A2-209ENST00000494852 EHBP1L1Q8N3D4 1523 aa25.61■■□□□ 1.69
COL4A2-209ENST00000494852 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
COL4A2-209ENST00000494852 FAM135AQ9P2D6 1515 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms