RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
RPS27A-209ENST00000494756 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
RPS27A-209ENST00000494756 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
RPS27A-209ENST00000494756 ATP10AO60312 1499 aa17.44■□□□□ 0.38
RPS27A-209ENST00000494756 MLECQ14165 292 aa17.43■□□□□ 0.38
RPS27A-209ENST00000494756 CERKQ8TCT0 537 aa17.43■□□□□ 0.38
RPS27A-209ENST00000494756 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
RPS27A-209ENST00000494756 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
RPS27A-209ENST00000494756 KDM5CP41229 1560 aa17.39■□□□□ 0.37
RPS27A-209ENST00000494756 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
RPS27A-209ENST00000494756 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
RPS27A-209ENST00000494756 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
RPS27A-209ENST00000494756 KIF14Q15058 1648 aa17.37■□□□□ 0.37
RPS27A-209ENST00000494756 REREQ9P2R6 1566 aa17.35■□□□□ 0.37
RPS27A-209ENST00000494756 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
RPS27A-209ENST00000494756 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
RPS27A-209ENST00000494756 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
RPS27A-209ENST00000494756 DIP2CQ9Y2E4 1556 aa17.33■□□□□ 0.37
RPS27A-209ENST00000494756 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
RPS27A-209ENST00000494756 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
RPS27A-209ENST00000494756 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
RPS27A-209ENST00000494756 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
RPS27A-209ENST00000494756 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
RPS27A-209ENST00000494756 CLIP1P30622 1438 aa17.3■□□□□ 0.36
RPS27A-209ENST00000494756 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
RPS27A-209ENST00000494756 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
RPS27A-209ENST00000494756 MLH3Q9UHC1 1453 aa17.29■□□□□ 0.36
RPS27A-209ENST00000494756 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
RPS27A-209ENST00000494756 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
RPS27A-209ENST00000494756 AGLP35573 1532 aa17.27■□□□□ 0.36
RPS27A-209ENST00000494756 PTPRTO14522 1441 aa17.26■□□□□ 0.35
RPS27A-209ENST00000494756 ABCC1P33527 1531 aa17.26■□□□□ 0.35
RPS27A-209ENST00000494756 C3P01024 1663 aa17.26■□□□□ 0.35
RPS27A-209ENST00000494756 LRRIQ1Q96JM4 1722 aa17.25■□□□□ 0.35
RPS27A-209ENST00000494756 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
RPS27A-209ENST00000494756 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
RPS27A-209ENST00000494756 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
RPS27A-209ENST00000494756 TRAPPC8Q9Y2L5 1435 aa17.22■□□□□ 0.35
RPS27A-209ENST00000494756 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
RPS27A-209ENST00000494756 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
RPS27A-209ENST00000494756 MYT1LQ9UL68 1186 aa17.2■□□□□ 0.34
RPS27A-209ENST00000494756 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
RPS27A-209ENST00000494756 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
RPS27A-209ENST00000494756 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
RPS27A-209ENST00000494756 ILDR2Q71H61 639 aa17.19■□□□□ 0.34
RPS27A-209ENST00000494756 KIDINS220Q9ULH0 1771 aa17.19■□□□□ 0.34
RPS27A-209ENST00000494756 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
RPS27A-209ENST00000494756 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
RPS27A-209ENST00000494756 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
RPS27A-209ENST00000494756 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
RPS27A-209ENST00000494756 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
RPS27A-209ENST00000494756 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
RPS27A-209ENST00000494756 NPATQ14207 1427 aa17.15■□□□□ 0.34
RPS27A-209ENST00000494756 SOCS7O14512 581 aa17.15■□□□□ 0.34
RPS27A-209ENST00000494756 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
RPS27A-209ENST00000494756 MROH2AA6NES4 1674 aa17.14■□□□□ 0.33
RPS27A-209ENST00000494756 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
RPS27A-209ENST00000494756 CAMSAP1Q5T5Y3 1602 aa17.11■□□□□ 0.33
RPS27A-209ENST00000494756 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
RPS27A-209ENST00000494756 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
RPS27A-209ENST00000494756 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
RPS27A-209ENST00000494756 ZMYM3Q14202 1370 aa17.07■□□□□ 0.32
RPS27A-209ENST00000494756 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
RPS27A-209ENST00000494756 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
RPS27A-209ENST00000494756 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
RPS27A-209ENST00000494756 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
RPS27A-209ENST00000494756 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
RPS27A-209ENST00000494756 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
RPS27A-209ENST00000494756 KIAA1107Q9UPP5 1409 aa17.05■□□□□ 0.32
RPS27A-209ENST00000494756 SPAG9O60271 1321 aaKnown RBP17.05■□□□□ 0.32
RPS27A-209ENST00000494756 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
RPS27A-209ENST00000494756 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
RPS27A-209ENST00000494756 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
RPS27A-209ENST00000494756 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
RPS27A-209ENST00000494756 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
RPS27A-209ENST00000494756 A2MP01023 1474 aa17.02■□□□□ 0.32
RPS27A-209ENST00000494756 PTPRKQ15262 1439 aa17.02■□□□□ 0.31
RPS27A-209ENST00000494756 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
RPS27A-209ENST00000494756 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
RPS27A-209ENST00000494756 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
RPS27A-209ENST00000494756 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
RPS27A-209ENST00000494756 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
RPS27A-209ENST00000494756 PKD2Q13563 968 aa16.99■□□□□ 0.31
RPS27A-209ENST00000494756 CFDP1Q9UEE9 299 aaPredicted RBP16.96■□□□□ 0.31
RPS27A-209ENST00000494756 ADGBQ8N7X0 1667 aa16.95■□□□□ 0.3
RPS27A-209ENST00000494756 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
RPS27A-209ENST00000494756 UBAP1LF5GYI3 381 aa16.95■□□□□ 0.3
RPS27A-209ENST00000494756 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
RPS27A-209ENST00000494756 A2ML1A8K2U0 1454 aa16.93■□□□□ 0.3
RPS27A-209ENST00000494756 GGT6Q6P531 493 aa16.93■□□□□ 0.3
RPS27A-209ENST00000494756 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
RPS27A-209ENST00000494756 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
RPS27A-209ENST00000494756 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
RPS27A-209ENST00000494756 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
RPS27A-209ENST00000494756 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
RPS27A-209ENST00000494756 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
RPS27A-209ENST00000494756 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
RPS27A-209ENST00000494756 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
RPS27A-209ENST00000494756 CPS1P31327 1500 aa16.87■□□□□ 0.29
RPS27A-209ENST00000494756 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms