RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 KDM6BO15054 1643 aa15.66■□□□□ 0.1
PRPF4B-209ENST00000494674 DAPK1P53355 1430 aa15.66■□□□□ 0.1
PRPF4B-209ENST00000494674 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
PRPF4B-209ENST00000494674 ABCC5O15440 1437 aa15.65■□□□□ 0.1
PRPF4B-209ENST00000494674 ADGBQ8N7X0 1667 aa15.64■□□□□ 0.09
PRPF4B-209ENST00000494674 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
PRPF4B-209ENST00000494674 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
PRPF4B-209ENST00000494674 CDC42BPBQ9Y5S2 1711 aa15.61■□□□□ 0.09
PRPF4B-209ENST00000494674 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
PRPF4B-209ENST00000494674 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
PRPF4B-209ENST00000494674 UHRF1BP1LA0JNW5 1464 aa15.6■□□□□ 0.09
PRPF4B-209ENST00000494674 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
PRPF4B-209ENST00000494674 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
PRPF4B-209ENST00000494674 TTC37Q6PGP7 1564 aa15.57■□□□□ 0.08
PRPF4B-209ENST00000494674 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
PRPF4B-209ENST00000494674 RRP7BPQ9NSQ0 103 aa15.57■□□□□ 0.08
PRPF4B-209ENST00000494674 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
PRPF4B-209ENST00000494674 CFDP1Q9UEE9 299 aaPredicted RBP15.57■□□□□ 0.08
PRPF4B-209ENST00000494674 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
PRPF4B-209ENST00000494674 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
PRPF4B-209ENST00000494674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
PRPF4B-209ENST00000494674 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
PRPF4B-209ENST00000494674 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
PRPF4B-209ENST00000494674 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
PRPF4B-209ENST00000494674 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
PRPF4B-209ENST00000494674 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
PRPF4B-209ENST00000494674 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
PRPF4B-209ENST00000494674 MBD5Q9P267 1494 aa15.49■□□□□ 0.07
PRPF4B-209ENST00000494674 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
PRPF4B-209ENST00000494674 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
PRPF4B-209ENST00000494674 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
PRPF4B-209ENST00000494674 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.06
PRPF4B-209ENST00000494674 ARHGAP5Q13017 1502 aa15.44■□□□□ 0.06
PRPF4B-209ENST00000494674 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
PRPF4B-209ENST00000494674 SYCP2Q9BX26 1530 aa15.44■□□□□ 0.06
PRPF4B-209ENST00000494674 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
PRPF4B-209ENST00000494674 PZPP20742 1482 aa15.43■□□□□ 0.06
PRPF4B-209ENST00000494674 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
PRPF4B-209ENST00000494674 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
PRPF4B-209ENST00000494674 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
PRPF4B-209ENST00000494674 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
PRPF4B-209ENST00000494674 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
PRPF4B-209ENST00000494674 PLCH2O75038 1416 aa15.39■□□□□ 0.05
PRPF4B-209ENST00000494674 ANKRD50Q9ULJ7 1429 aa15.39■□□□□ 0.05
PRPF4B-209ENST00000494674 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
PRPF4B-209ENST00000494674 ARAP3Q8WWN8 1544 aa15.39■□□□□ 0.05
PRPF4B-209ENST00000494674 WDR7Q9Y4E6 1490 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 HNRNPMP52272 730 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 ABCC1P33527 1531 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 ARHGEF12Q9NZN5 1544 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 PLEKHH2Q8IVE3 1493 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 PLXNC1O60486 1568 aa15.38■□□□□ 0.05
PRPF4B-209ENST00000494674 ABCA9Q8IUA7 1624 aa15.37■□□□□ 0.05
PRPF4B-209ENST00000494674 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
PRPF4B-209ENST00000494674 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
PRPF4B-209ENST00000494674 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
PRPF4B-209ENST00000494674 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
PRPF4B-209ENST00000494674 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
PRPF4B-209ENST00000494674 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.05
PRPF4B-209ENST00000494674 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
PRPF4B-209ENST00000494674 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
PRPF4B-209ENST00000494674 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
PRPF4B-209ENST00000494674 UNC13BO14795 1591 aa15.32■□□□□ 0.04
PRPF4B-209ENST00000494674 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
PRPF4B-209ENST00000494674 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
PRPF4B-209ENST00000494674 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
PRPF4B-209ENST00000494674 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
PRPF4B-209ENST00000494674 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
PRPF4B-209ENST00000494674 ZFYVE16Q7Z3T8 1539 aa15.26■□□□□ 0.03
PRPF4B-209ENST00000494674 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
PRPF4B-209ENST00000494674 MIER1Q8N108 512 aa15.25■□□□□ 0.03
PRPF4B-209ENST00000494674 IQGAP3Q86VI3 1631 aa15.25■□□□□ 0.03
PRPF4B-209ENST00000494674 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
PRPF4B-209ENST00000494674 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
PRPF4B-209ENST00000494674 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
PRPF4B-209ENST00000494674 NUP155O75694 1391 aa15.24■□□□□ 0.03
PRPF4B-209ENST00000494674 FANCAO15360 1455 aa15.24■□□□□ 0.03
PRPF4B-209ENST00000494674 PKD2Q13563 968 aa15.22■□□□□ 0.03
PRPF4B-209ENST00000494674 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
PRPF4B-209ENST00000494674 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
PRPF4B-209ENST00000494674 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
PRPF4B-209ENST00000494674 ATP7AQ04656 1500 aa15.18■□□□□ 0.02
PRPF4B-209ENST00000494674 DEPDC5O75140 1603 aa15.18■□□□□ 0.02
PRPF4B-209ENST00000494674 ADGRL1O94910 1474 aa15.17■□□□□ 0.02
PRPF4B-209ENST00000494674 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
PRPF4B-209ENST00000494674 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
PRPF4B-209ENST00000494674 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
PRPF4B-209ENST00000494674 CFAP74Q9C0B2 1584 aa15.17■□□□□ 0.02
PRPF4B-209ENST00000494674 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
PRPF4B-209ENST00000494674 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
PRPF4B-209ENST00000494674 NBPF8Q3BBV2 869 aa15.14■□□□□ 0.01
PRPF4B-209ENST00000494674 AFAP1Q8N556 730 aa15.14■□□□□ 0.01
PRPF4B-209ENST00000494674 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
PRPF4B-209ENST00000494674 SPAG9O60271 1321 aaKnown RBP15.14■□□□□ 0.01
PRPF4B-209ENST00000494674 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
PRPF4B-209ENST00000494674 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
PRPF4B-209ENST00000494674 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
PRPF4B-209ENST00000494674 KDM5CP41229 1560 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms