RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 CAPN15O75808 1086 aa11.22□□□□□ -0.61
SEC23B-208ENST00000494645 EEA1Q15075 1411 aa11.22□□□□□ -0.61
SEC23B-208ENST00000494645 FRMPD1Q5SYB0 1578 aa11.21□□□□□ -0.61
SEC23B-208ENST00000494645 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
SEC23B-208ENST00000494645 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
SEC23B-208ENST00000494645 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
SEC23B-208ENST00000494645 UBTFP17480 764 aaKnown RBP11.19□□□□□ -0.62
SEC23B-208ENST00000494645 MLECQ14165 292 aa11.19□□□□□ -0.62
SEC23B-208ENST00000494645 FANCAO15360 1455 aa11.19□□□□□ -0.62
SEC23B-208ENST00000494645 MADDQ8WXG6 1647 aa11.18□□□□□ -0.62
SEC23B-208ENST00000494645 CDK13Q14004 1512 aaKnown RBP11.18□□□□□ -0.62
SEC23B-208ENST00000494645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.62
SEC23B-208ENST00000494645 BCORL1Q5H9F3 1711 aa11.17□□□□□ -0.62
SEC23B-208ENST00000494645 HSPA2P54652 639 aa11.16□□□□□ -0.62
SEC23B-208ENST00000494645 FBXO41Q8TF61 875 aa11.16□□□□□ -0.62
SEC23B-208ENST00000494645 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
SEC23B-208ENST00000494645 TTC37Q6PGP7 1564 aa11.16□□□□□ -0.62
SEC23B-208ENST00000494645 ARHGEF40Q8TER5 1519 aa11.15□□□□□ -0.62
SEC23B-208ENST00000494645 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
SEC23B-208ENST00000494645 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
SEC23B-208ENST00000494645 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
SEC23B-208ENST00000494645 RIMS1Q86UR5 1692 aaKnown RBP11.14□□□□□ -0.63
SEC23B-208ENST00000494645 RICTORQ6R327 1708 aa11.13□□□□□ -0.63
SEC23B-208ENST00000494645 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
SEC23B-208ENST00000494645 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
SEC23B-208ENST00000494645 ZFYVE16Q7Z3T8 1539 aa11.13□□□□□ -0.63
SEC23B-208ENST00000494645 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
SEC23B-208ENST00000494645 CFAP74Q9C0B2 1584 aa11.11□□□□□ -0.63
SEC23B-208ENST00000494645 PLCH2O75038 1416 aa11.11□□□□□ -0.63
SEC23B-208ENST00000494645 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
SEC23B-208ENST00000494645 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
SEC23B-208ENST00000494645 HECW1Q76N89 1606 aa11.1□□□□□ -0.63
SEC23B-208ENST00000494645 CDK11AQ9UQ88 783 aaPredicted RBP11.1□□□□□ -0.63
SEC23B-208ENST00000494645 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
SEC23B-208ENST00000494645 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
SEC23B-208ENST00000494645 ARHGAP35Q9NRY4 1499 aa11.09□□□□□ -0.63
SEC23B-208ENST00000494645 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
SEC23B-208ENST00000494645 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
SEC23B-208ENST00000494645 POTEHQ6S545 545 aa11.08□□□□□ -0.64
SEC23B-208ENST00000494645 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
SEC23B-208ENST00000494645 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
SEC23B-208ENST00000494645 ATP10AO60312 1499 aa11.06□□□□□ -0.64
SEC23B-208ENST00000494645 KIF14Q15058 1648 aa11.06□□□□□ -0.64
SEC23B-208ENST00000494645 C9orf84Q5VXU9 1444 aa11.05□□□□□ -0.64
SEC23B-208ENST00000494645 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
SEC23B-208ENST00000494645 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
SEC23B-208ENST00000494645 CLIP1P30622 1438 aa11.03□□□□□ -0.64
SEC23B-208ENST00000494645 FER1L4A9Z1Z3 1794 aa11.03□□□□□ -0.64
SEC23B-208ENST00000494645 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
SEC23B-208ENST00000494645 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
SEC23B-208ENST00000494645 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
SEC23B-208ENST00000494645 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
SEC23B-208ENST00000494645 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
SEC23B-208ENST00000494645 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
SEC23B-208ENST00000494645 TRAPPC8Q9Y2L5 1435 aa10.99□□□□□ -0.65
SEC23B-208ENST00000494645 CASKIN1Q8WXD9 1431 aa10.97□□□□□ -0.65
SEC23B-208ENST00000494645 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
SEC23B-208ENST00000494645 KDM5CP41229 1560 aa10.96□□□□□ -0.65
SEC23B-208ENST00000494645 DIP2CQ9Y2E4 1556 aa10.96□□□□□ -0.65
SEC23B-208ENST00000494645 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
SEC23B-208ENST00000494645 APLP2Q06481 763 aa10.96□□□□□ -0.65
SEC23B-208ENST00000494645 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
SEC23B-208ENST00000494645 ABCB7O75027 752 aa10.95□□□□□ -0.66
SEC23B-208ENST00000494645 CDC42BPBQ9Y5S2 1711 aa10.95□□□□□ -0.66
SEC23B-208ENST00000494645 ABCA6Q8N139 1617 aa10.95□□□□□ -0.66
SEC23B-208ENST00000494645 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
SEC23B-208ENST00000494645 MLH3Q9UHC1 1453 aa10.94□□□□□ -0.66
SEC23B-208ENST00000494645 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEC23B-208ENST00000494645 PREX1Q8TCU6 1659 aa10.94□□□□□ -0.66
SEC23B-208ENST00000494645 ABCC1P33527 1531 aa10.94□□□□□ -0.66
SEC23B-208ENST00000494645 PREX2Q70Z35 1606 aa10.92□□□□□ -0.66
SEC23B-208ENST00000494645 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
SEC23B-208ENST00000494645 ITSN2Q9NZM3 1697 aa10.9□□□□□ -0.66
SEC23B-208ENST00000494645 FYCO1Q9BQS8 1478 aa10.9□□□□□ -0.66
SEC23B-208ENST00000494645 CFDP1Q9UEE9 299 aaPredicted RBP10.9□□□□□ -0.66
SEC23B-208ENST00000494645 STRCQ7RTU9 1775 aa10.9□□□□□ -0.67
SEC23B-208ENST00000494645 REREQ9P2R6 1566 aa10.9□□□□□ -0.67
SEC23B-208ENST00000494645 AGLP35573 1532 aa10.89□□□□□ -0.67
SEC23B-208ENST00000494645 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
SEC23B-208ENST00000494645 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
SEC23B-208ENST00000494645 C3P01024 1663 aa10.89□□□□□ -0.67
SEC23B-208ENST00000494645 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
SEC23B-208ENST00000494645 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
SEC23B-208ENST00000494645 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
SEC23B-208ENST00000494645 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
SEC23B-208ENST00000494645 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
SEC23B-208ENST00000494645 GGT6Q6P531 493 aa10.87□□□□□ -0.67
SEC23B-208ENST00000494645 ZMYM3Q14202 1370 aa10.87□□□□□ -0.67
SEC23B-208ENST00000494645 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
SEC23B-208ENST00000494645 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
SEC23B-208ENST00000494645 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
SEC23B-208ENST00000494645 PTPRTO14522 1441 aa10.86□□□□□ -0.67
SEC23B-208ENST00000494645 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
SEC23B-208ENST00000494645 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
SEC23B-208ENST00000494645 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
SEC23B-208ENST00000494645 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
SEC23B-208ENST00000494645 ILDR2Q71H61 639 aa10.84□□□□□ -0.67
SEC23B-208ENST00000494645 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
SEC23B-208ENST00000494645 SUPT6HQ7KZ85 1726 aaKnown RBP10.84□□□□□ -0.67
SEC23B-208ENST00000494645 ATP7AQ04656 1500 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms