RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
CSNK1E-212ENST00000494610 FER1L4A9Z1Z3 1794 aa19.51■□□□□ 0.71
CSNK1E-212ENST00000494610 PLCH2O75038 1416 aa19.51■□□□□ 0.71
CSNK1E-212ENST00000494610 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
CSNK1E-212ENST00000494610 KIF14Q15058 1648 aa19.47■□□□□ 0.71
CSNK1E-212ENST00000494610 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
CSNK1E-212ENST00000494610 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
CSNK1E-212ENST00000494610 CERKQ8TCT0 537 aa19.45■□□□□ 0.7
CSNK1E-212ENST00000494610 ATP10AO60312 1499 aa19.43■□□□□ 0.7
CSNK1E-212ENST00000494610 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
CSNK1E-212ENST00000494610 MYO5CQ9NQX4 1742 aa19.43■□□□□ 0.7
CSNK1E-212ENST00000494610 ARHGEF12Q9NZN5 1544 aa19.43■□□□□ 0.7
CSNK1E-212ENST00000494610 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
CSNK1E-212ENST00000494610 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
CSNK1E-212ENST00000494610 EFCAB2Q5VUJ9 269 aa19.41■□□□□ 0.7
CSNK1E-212ENST00000494610 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
CSNK1E-212ENST00000494610 ARHGAP5Q13017 1502 aa19.37■□□□□ 0.69
CSNK1E-212ENST00000494610 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
CSNK1E-212ENST00000494610 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
CSNK1E-212ENST00000494610 FMN1Q68DA7 1419 aa19.36■□□□□ 0.69
CSNK1E-212ENST00000494610 STRCQ7RTU9 1775 aa19.36■□□□□ 0.69
CSNK1E-212ENST00000494610 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
CSNK1E-212ENST00000494610 DIP2CQ9Y2E4 1556 aa19.33■□□□□ 0.69
CSNK1E-212ENST00000494610 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
CSNK1E-212ENST00000494610 KDM5CP41229 1560 aa19.32■□□□□ 0.68
CSNK1E-212ENST00000494610 ZNF518AQ6AHZ1 1483 aa19.32■□□□□ 0.68
CSNK1E-212ENST00000494610 ABCA6Q8N139 1617 aa19.32■□□□□ 0.68
CSNK1E-212ENST00000494610 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-212ENST00000494610 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
CSNK1E-212ENST00000494610 C3P01024 1663 aa19.27■□□□□ 0.68
CSNK1E-212ENST00000494610 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
CSNK1E-212ENST00000494610 ILDR2Q71H61 639 aa19.27■□□□□ 0.68
CSNK1E-212ENST00000494610 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
CSNK1E-212ENST00000494610 CLIP1P30622 1438 aa19.25■□□□□ 0.67
CSNK1E-212ENST00000494610 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
CSNK1E-212ENST00000494610 ABCC1P33527 1531 aa19.23■□□□□ 0.67
CSNK1E-212ENST00000494610 ITSN2Q9NZM3 1697 aa19.23■□□□□ 0.67
CSNK1E-212ENST00000494610 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
CSNK1E-212ENST00000494610 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-212ENST00000494610 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
CSNK1E-212ENST00000494610 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
CSNK1E-212ENST00000494610 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
CSNK1E-212ENST00000494610 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
CSNK1E-212ENST00000494610 CDC42BPAQ5VT25 1732 aa19.2■□□□□ 0.66
CSNK1E-212ENST00000494610 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
CSNK1E-212ENST00000494610 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
CSNK1E-212ENST00000494610 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
CSNK1E-212ENST00000494610 AGLP35573 1532 aa19.16■□□□□ 0.66
CSNK1E-212ENST00000494610 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSNK1E-212ENST00000494610 LTBP4Q8N2S1 1624 aa19.14■□□□□ 0.66
CSNK1E-212ENST00000494610 PTPRTO14522 1441 aa19.14■□□□□ 0.65
CSNK1E-212ENST00000494610 SAMD9LQ8IVG5 1584 aa19.14■□□□□ 0.65
CSNK1E-212ENST00000494610 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
CSNK1E-212ENST00000494610 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
CSNK1E-212ENST00000494610 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
CSNK1E-212ENST00000494610 NCOA1Q15788 1441 aa19.11■□□□□ 0.65
CSNK1E-212ENST00000494610 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
CSNK1E-212ENST00000494610 CAMSAP1Q5T5Y3 1602 aa19.1■□□□□ 0.65
CSNK1E-212ENST00000494610 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
CSNK1E-212ENST00000494610 ZMYM3Q14202 1370 aa19.08■□□□□ 0.65
CSNK1E-212ENST00000494610 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.65
CSNK1E-212ENST00000494610 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
CSNK1E-212ENST00000494610 ZNF335Q9H4Z2 1342 aaPredicted RBP19.05■□□□□ 0.64
CSNK1E-212ENST00000494610 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
CSNK1E-212ENST00000494610 CNTLNQ9NXG0 1405 aa19.05■□□□□ 0.64
CSNK1E-212ENST00000494610 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
CSNK1E-212ENST00000494610 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
CSNK1E-212ENST00000494610 SOCS7O14512 581 aa19.03■□□□□ 0.64
CSNK1E-212ENST00000494610 GGT6Q6P531 493 aa19.03■□□□□ 0.64
CSNK1E-212ENST00000494610 MROH2AA6NES4 1674 aa19.03■□□□□ 0.64
CSNK1E-212ENST00000494610 ATP7AQ04656 1500 aa19.03■□□□□ 0.64
CSNK1E-212ENST00000494610 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
CSNK1E-212ENST00000494610 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
CSNK1E-212ENST00000494610 NPATQ14207 1427 aa19■□□□□ 0.63
CSNK1E-212ENST00000494610 A2MP01023 1474 aa19■□□□□ 0.63
CSNK1E-212ENST00000494610 PLXNC1O60486 1568 aa19■□□□□ 0.63
CSNK1E-212ENST00000494610 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
CSNK1E-212ENST00000494610 PTPRKQ15262 1439 aa18.99■□□□□ 0.63
CSNK1E-212ENST00000494610 CCNB3Q8WWL7 1395 aa18.97■□□□□ 0.63
CSNK1E-212ENST00000494610 UBAP1LF5GYI3 381 aa18.96■□□□□ 0.63
CSNK1E-212ENST00000494610 CEP170BQ9Y4F5 1589 aaPredicted RBP18.95■□□□□ 0.62
CSNK1E-212ENST00000494610 KIAA1107Q9UPP5 1409 aa18.95■□□□□ 0.62
CSNK1E-212ENST00000494610 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
CSNK1E-212ENST00000494610 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
CSNK1E-212ENST00000494610 TCOF1Q13428 1488 aaKnown RBP18.92■□□□□ 0.62
CSNK1E-212ENST00000494610 FBXO31Q5XUX0 539 aaPredicted RBP18.92■□□□□ 0.62
CSNK1E-212ENST00000494610 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
CSNK1E-212ENST00000494610 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
CSNK1E-212ENST00000494610 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
CSNK1E-212ENST00000494610 MBD5Q9P267 1494 aa18.9■□□□□ 0.62
CSNK1E-212ENST00000494610 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
CSNK1E-212ENST00000494610 PLA2R1Q13018 1463 aa18.89■□□□□ 0.61
CSNK1E-212ENST00000494610 PKD2Q13563 968 aa18.88■□□□□ 0.61
CSNK1E-212ENST00000494610 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
CSNK1E-212ENST00000494610 DNMT1P26358 1616 aaKnown RBP18.88■□□□□ 0.61
CSNK1E-212ENST00000494610 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
CSNK1E-212ENST00000494610 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-212ENST00000494610 KIF3BO15066 747 aa18.84■□□□□ 0.61
CSNK1E-212ENST00000494610 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
CSNK1E-212ENST00000494610 DHX29Q7Z478 1369 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms