RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
LINC00488-201ENST00000494582 MS4A1P11836 297 aa13.5□□□□□ -0.25
LINC00488-201ENST00000494582 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
LINC00488-201ENST00000494582 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
LINC00488-201ENST00000494582 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
LINC00488-201ENST00000494582 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
LINC00488-201ENST00000494582 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
LINC00488-201ENST00000494582 FOXD1Q16676 465 aa13.48□□□□□ -0.25
LINC00488-201ENST00000494582 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
LINC00488-201ENST00000494582 PNISRQ8TF01 805 aaKnown RBP13.47□□□□□ -0.25
LINC00488-201ENST00000494582 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
LINC00488-201ENST00000494582 DDRGK1Q96HY6 314 aa13.45□□□□□ -0.26
LINC00488-201ENST00000494582 RRP7BPQ9NSQ0 103 aa13.45□□□□□ -0.26
LINC00488-201ENST00000494582 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
LINC00488-201ENST00000494582 KDM6BO15054 1643 aa13.45□□□□□ -0.26
LINC00488-201ENST00000494582 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
LINC00488-201ENST00000494582 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
LINC00488-201ENST00000494582 FYCO1Q9BQS8 1478 aa13.43□□□□□ -0.26
LINC00488-201ENST00000494582 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
LINC00488-201ENST00000494582 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
LINC00488-201ENST00000494582 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
LINC00488-201ENST00000494582 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
LINC00488-201ENST00000494582 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
LINC00488-201ENST00000494582 PLIN1O60240 522 aa13.41□□□□□ -0.26
LINC00488-201ENST00000494582 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
LINC00488-201ENST00000494582 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
LINC00488-201ENST00000494582 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
LINC00488-201ENST00000494582 MPHOSPH9Q99550 1183 aa13.39□□□□□ -0.27
LINC00488-201ENST00000494582 TEX14Q8IWB6 1497 aa13.38□□□□□ -0.27
LINC00488-201ENST00000494582 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
LINC00488-201ENST00000494582 POGKQ9P215 609 aa13.38□□□□□ -0.27
LINC00488-201ENST00000494582 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
LINC00488-201ENST00000494582 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
LINC00488-201ENST00000494582 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
LINC00488-201ENST00000494582 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
LINC00488-201ENST00000494582 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
LINC00488-201ENST00000494582 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
LINC00488-201ENST00000494582 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
LINC00488-201ENST00000494582 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.28
LINC00488-201ENST00000494582 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
LINC00488-201ENST00000494582 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
LINC00488-201ENST00000494582 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
LINC00488-201ENST00000494582 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.28
LINC00488-201ENST00000494582 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
LINC00488-201ENST00000494582 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
LINC00488-201ENST00000494582 CFTRP13569 1480 aa13.31□□□□□ -0.28
LINC00488-201ENST00000494582 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
LINC00488-201ENST00000494582 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
LINC00488-201ENST00000494582 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
LINC00488-201ENST00000494582 USP47Q96K76 1375 aa13.28□□□□□ -0.28
LINC00488-201ENST00000494582 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
LINC00488-201ENST00000494582 FAM161AQ3B820 660 aa13.28□□□□□ -0.28
LINC00488-201ENST00000494582 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
LINC00488-201ENST00000494582 HSP90AA2PQ14568 343 aaPredicted RBP13.27□□□□□ -0.29
LINC00488-201ENST00000494582 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
LINC00488-201ENST00000494582 ARXQ96QS3 562 aa13.26□□□□□ -0.29
LINC00488-201ENST00000494582 MAGI3Q5TCQ9 1506 aa13.25□□□□□ -0.29
LINC00488-201ENST00000494582 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
LINC00488-201ENST00000494582 MYBBP1AQ9BQG0 1328 aaKnown RBP13.25□□□□□ -0.29
LINC00488-201ENST00000494582 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
LINC00488-201ENST00000494582 USP19O94966 1318 aa13.24□□□□□ -0.29
LINC00488-201ENST00000494582 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
LINC00488-201ENST00000494582 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
LINC00488-201ENST00000494582 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
LINC00488-201ENST00000494582 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
LINC00488-201ENST00000494582 KIF15Q9NS87 1388 aa13.23□□□□□ -0.29
LINC00488-201ENST00000494582 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00488-201ENST00000494582 KDM5CP41229 1560 aa13.22□□□□□ -0.29
LINC00488-201ENST00000494582 ARHGEF11O15085 1522 aa13.22□□□□□ -0.29
LINC00488-201ENST00000494582 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
LINC00488-201ENST00000494582 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
LINC00488-201ENST00000494582 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
LINC00488-201ENST00000494582 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
LINC00488-201ENST00000494582 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
LINC00488-201ENST00000494582 RGS3P49796 1198 aa13.21□□□□□ -0.29
LINC00488-201ENST00000494582 CLCN1P35523 988 aa13.2□□□□□ -0.3
LINC00488-201ENST00000494582 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
LINC00488-201ENST00000494582 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
LINC00488-201ENST00000494582 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
LINC00488-201ENST00000494582 PODXL2Q9NZ53 605 aa13.19□□□□□ -0.3
LINC00488-201ENST00000494582 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
LINC00488-201ENST00000494582 SEC24BO95487 1268 aa13.18□□□□□ -0.3
LINC00488-201ENST00000494582 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
LINC00488-201ENST00000494582 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
LINC00488-201ENST00000494582 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
LINC00488-201ENST00000494582 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
LINC00488-201ENST00000494582 RALBP1Q15311 655 aa13.17□□□□□ -0.3
LINC00488-201ENST00000494582 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
LINC00488-201ENST00000494582 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
LINC00488-201ENST00000494582 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
LINC00488-201ENST00000494582 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
LINC00488-201ENST00000494582 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
LINC00488-201ENST00000494582 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
LINC00488-201ENST00000494582 KIF14Q15058 1648 aa13.14□□□□□ -0.31
LINC00488-201ENST00000494582 E9PCH4 1651 aa13.14□□□□□ -0.31
LINC00488-201ENST00000494582 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
LINC00488-201ENST00000494582 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
LINC00488-201ENST00000494582 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
LINC00488-201ENST00000494582 PZPP20742 1482 aa13.12□□□□□ -0.31
LINC00488-201ENST00000494582 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms