RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 PLB1Q6P1J6 1458 aa16.24■□□□□ 0.19
LDHA-211ENST00000494573 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
LDHA-211ENST00000494573 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
LDHA-211ENST00000494573 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
LDHA-211ENST00000494573 ROCK1Q13464 1354 aa16.23■□□□□ 0.19
LDHA-211ENST00000494573 KIF14Q15058 1648 aa16.23■□□□□ 0.19
LDHA-211ENST00000494573 DAPK1P53355 1430 aa16.22■□□□□ 0.19
LDHA-211ENST00000494573 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
LDHA-211ENST00000494573 KDM6BO15054 1643 aa16.21■□□□□ 0.19
LDHA-211ENST00000494573 FBLN2P98095 1184 aa16.2■□□□□ 0.18
LDHA-211ENST00000494573 MIER1Q8N108 512 aa16.19■□□□□ 0.18
LDHA-211ENST00000494573 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
LDHA-211ENST00000494573 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
LDHA-211ENST00000494573 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
LDHA-211ENST00000494573 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
LDHA-211ENST00000494573 ABCC5O15440 1437 aa16.17■□□□□ 0.18
LDHA-211ENST00000494573 GPATCH8Q9UKJ3 1502 aaKnown RBP16.16■□□□□ 0.18
LDHA-211ENST00000494573 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
LDHA-211ENST00000494573 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
LDHA-211ENST00000494573 NEUROD1Q13562 356 aa16.14■□□□□ 0.17
LDHA-211ENST00000494573 ATP10BO94823 1461 aa16.14■□□□□ 0.17
LDHA-211ENST00000494573 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
LDHA-211ENST00000494573 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
LDHA-211ENST00000494573 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
LDHA-211ENST00000494573 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
LDHA-211ENST00000494573 DENND4BO75064 1496 aaPredicted RBP16.12■□□□□ 0.17
LDHA-211ENST00000494573 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
LDHA-211ENST00000494573 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
LDHA-211ENST00000494573 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
LDHA-211ENST00000494573 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
LDHA-211ENST00000494573 PREX2Q70Z35 1606 aa16.08■□□□□ 0.17
LDHA-211ENST00000494573 PTPRGP23470 1445 aa16.08■□□□□ 0.16
LDHA-211ENST00000494573 ARHGEF5Q12774 1597 aa16.08■□□□□ 0.16
LDHA-211ENST00000494573 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
LDHA-211ENST00000494573 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
LDHA-211ENST00000494573 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
LDHA-211ENST00000494573 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
LDHA-211ENST00000494573 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
LDHA-211ENST00000494573 ZNF644Q9H582 1327 aaPredicted RBP16.04■□□□□ 0.16
LDHA-211ENST00000494573 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
LDHA-211ENST00000494573 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
LDHA-211ENST00000494573 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
LDHA-211ENST00000494573 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
LDHA-211ENST00000494573 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.15
LDHA-211ENST00000494573 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
LDHA-211ENST00000494573 PZPP20742 1482 aa15.99■□□□□ 0.15
LDHA-211ENST00000494573 RPRD2Q5VT52 1461 aaKnown RBP15.99■□□□□ 0.15
LDHA-211ENST00000494573 SAMD9LQ8IVG5 1584 aa15.99■□□□□ 0.15
LDHA-211ENST00000494573 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
LDHA-211ENST00000494573 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
LDHA-211ENST00000494573 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
LDHA-211ENST00000494573 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
LDHA-211ENST00000494573 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
LDHA-211ENST00000494573 C9orf84Q5VXU9 1444 aa15.96■□□□□ 0.15
LDHA-211ENST00000494573 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.14
LDHA-211ENST00000494573 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.14
LDHA-211ENST00000494573 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
LDHA-211ENST00000494573 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
LDHA-211ENST00000494573 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
LDHA-211ENST00000494573 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
LDHA-211ENST00000494573 ZNF777Q9ULD5 760 aaPredicted RBP15.93■□□□□ 0.14
LDHA-211ENST00000494573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.93■□□□□ 0.142e-17■■■□□ 14.8
LDHA-211ENST00000494573 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
LDHA-211ENST00000494573 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
LDHA-211ENST00000494573 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
LDHA-211ENST00000494573 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
LDHA-211ENST00000494573 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
LDHA-211ENST00000494573 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
LDHA-211ENST00000494573 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
LDHA-211ENST00000494573 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
LDHA-211ENST00000494573 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
LDHA-211ENST00000494573 UNC13BO14795 1591 aa15.87■□□□□ 0.13
LDHA-211ENST00000494573 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
LDHA-211ENST00000494573 SYCP2Q9BX26 1530 aa15.86■□□□□ 0.13
LDHA-211ENST00000494573 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
LDHA-211ENST00000494573 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
LDHA-211ENST00000494573 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
LDHA-211ENST00000494573 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
LDHA-211ENST00000494573 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
LDHA-211ENST00000494573 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.12
LDHA-211ENST00000494573 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
LDHA-211ENST00000494573 ARHGEF12Q9NZN5 1544 aa15.81■□□□□ 0.12
LDHA-211ENST00000494573 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
LDHA-211ENST00000494573 ABCC1P33527 1531 aa15.8■□□□□ 0.12
LDHA-211ENST00000494573 HNRNPMP52272 730 aaKnown RBP eCLIP15.8■□□□□ 0.12
LDHA-211ENST00000494573 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
LDHA-211ENST00000494573 PLCH2O75038 1416 aa15.79■□□□□ 0.12
LDHA-211ENST00000494573 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
LDHA-211ENST00000494573 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
LDHA-211ENST00000494573 NUP155O75694 1391 aa15.78■□□□□ 0.12
LDHA-211ENST00000494573 ANP32CO43423 234 aa15.78■□□□□ 0.12
LDHA-211ENST00000494573 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
LDHA-211ENST00000494573 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
LDHA-211ENST00000494573 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
LDHA-211ENST00000494573 PKD2Q13563 968 aa15.77■□□□□ 0.12
LDHA-211ENST00000494573 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
LDHA-211ENST00000494573 UHRF1BP1Q6BDS2 1440 aa15.76■□□□□ 0.11
LDHA-211ENST00000494573 NBPF8Q3BBV2 869 aa15.75■□□□□ 0.11
LDHA-211ENST00000494573 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
LDHA-211ENST00000494573 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms